Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS25385

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
5,667,907	-				+1.0
5,667,911	+				-2.5
5,667,911	+				-2.1
5,667,911	+				+1.2
5,667,912	-				+0.1
5,667,912	-				+1.6
5,667,912	-				-0.2
5,667,943	+				-0.5
5,667,943	+				-2.5
5,667,943	+				+1.8
5,667,944	-				+1.2
5,667,944	-				+1.6
5,667,944	-				+0.6
5,667,953	+				+1.1
5,667,953	+				+0.8
5,667,953	+				+2.1
5,667,953	+				-1.6
5,667,953	+				-1.6
5,667,953	+				+1.6
5,667,953	+				-2.3
5,667,954	-				+1.1
5,667,954	-				+0.8
5,667,954	-				+0.3
5,667,954	-				+2.4
5,667,954	-				+0.2
5,667,954	-				+0.6
5,667,954	-				-0.1
5,667,957	+				-1.8
5,667,958	-				-0.5
5,667,958	-				-1.9
5,667,958	-				+0.1
5,667,992	+				+1.0
5,667,992	+				-1.0
5,667,993	-				+0.9
5,667,993	-				+0.0
5,667,994	+				+0.2
5,667,994	+				+0.4
5,667,994	+				+1.6
5,667,994	+				+0.8
5,667,994	+				-1.1
5,667,994	+				-0.5
5,667,995	-				+1.6
5,667,995	-				-1.5
5,667,995	-				+1.5
5,667,995	-				+0.6
5,667,995	-				+0.4
5,667,996	+				+1.5
5,667,996	+				+0.2
5,667,996	+				+0.3
5,667,996	+				+0.7
5,667,996	+				+0.7
5,667,996	+				+0.6
5,667,996	+				+2.5
5,667,996	+				-3.0
5,667,996	+				-0.6
5,667,996	+				-0.4
5,667,996	+				+0.6
5,667,996	+				-0.4
5,667,996	+				+0.2
5,667,996	+				-0.1
5,667,996	+				+1.7
5,667,996	+				-2.2
5,667,996	+				-0.3
5,667,996	+				-2.5
5,667,996	+				+1.1
5,667,996	+				-2.2
5,667,996	+				+1.4
5,667,996	+				+0.5
5,667,996	+				+1.4
5,667,996	+				+1.0
5,667,997	-				-1.0
5,667,997	-				-1.5
5,667,997	-				+1.9
5,667,997	-				+0.6
5,667,997	-				-0.8
5,667,997	-				-1.6
5,667,997	-				+0.8
5,667,997	-				+0.5
5,667,997	-				+1.2
5,667,997	-				-1.8
5,667,997	-				-0.7
5,667,997	-				-0.0
5,667,997	-				+0.0
5,667,997	-				+0.3
5,667,997	-				-0.4
5,667,997	-				+0.7
5,668,010	+				-1.8
5,668,037	-				+0.1
5,668,077	+		PFLU_RS25385	0.11	+1.5
5,668,077	+		PFLU_RS25385	0.11	-0.5
5,668,078	-		PFLU_RS25385	0.12	-2.2
5,668,083	+		PFLU_RS25385	0.13	-1.1
5,668,083	+		PFLU_RS25385	0.13	+0.3
5,668,083	+		PFLU_RS25385	0.13	-0.1
5,668,083	+		PFLU_RS25385	0.13	+2.3
5,668,083	+		PFLU_RS25385	0.13	-2.3
5,668,083	+		PFLU_RS25385	0.13	-1.4
5,668,083	+		PFLU_RS25385	0.13	-0.9
5,668,083	+		PFLU_RS25385	0.13	+2.4
5,668,083	+		PFLU_RS25385	0.13	+0.6
5,668,083	+		PFLU_RS25385	0.13	+0.3
5,668,083	+		PFLU_RS25385	0.13	-0.8
5,668,084	-		PFLU_RS25385	0.13	-0.5
5,668,084	-		PFLU_RS25385	0.13	-0.9
5,668,084	-		PFLU_RS25385	0.13	+0.1
5,668,084	-		PFLU_RS25385	0.13	-2.0
5,668,084	-		PFLU_RS25385	0.13	+0.0
5,668,084	-		PFLU_RS25385	0.13	+1.0
5,668,084	-		PFLU_RS25385	0.13	+0.2
5,668,084	-		PFLU_RS25385	0.13	+1.1
5,668,477	+				-1.3
5,668,477	+				+0.6
5,668,477	+				+1.3
5,668,544	+				-1.0
5,668,544	+				-0.7
5,668,544	+				-0.7
5,668,544	+				+2.3
5,668,544	+				-2.0
5,668,544	+				+1.7
5,668,544	+				-0.9
5,668,544	+				+0.1
5,668,544	+				-0.0
5,668,544	+				-0.4
5,668,545	-				+0.3
5,668,545	-				+0.1
5,668,545	-				+1.5
5,668,545	-				-1.8
5,668,545	-				+1.5
5,668,551	+				-3.1
5,668,551	+				+0.2
5,668,551	+				-1.1
5,668,551	+				-1.1
5,668,552	-				-1.7
5,668,552	-				-1.1
5,668,552	-				+0.1
5,668,580	+		PFLU_RS25390	0.16	+0.5
5,668,580	+		PFLU_RS25390	0.16	-2.2
5,668,581	-		PFLU_RS25390	0.17	+0.5
5,668,581	-		PFLU_RS25390	0.17	+0.3
5,668,623	+		PFLU_RS25390	0.33	-0.2
5,668,723	+		PFLU_RS25390	0.72	-2.1
5,668,742	+		PFLU_RS25390	0.79	-0.0
5,668,743	-		PFLU_RS25390	0.79	-1.4
5,668,743	-		PFLU_RS25390	0.79	-1.3
5,668,743	-		PFLU_RS25390	0.79	-0.8
5,668,818	+				+1.3
5,668,818	+				-3.7
5,668,827	+				-0.5
5,668,827	+				+0.4
5,668,827	+				+0.7
5,668,827	+				+0.4
5,668,827	+				+0.3
5,668,827	+				-3.1
5,668,827	+				+0.1
5,668,827	+				+0.7
5,668,827	+				+0.1
5,668,827	+				-1.2
5,668,827	+				-1.1
5,668,827	+				+0.7
5,668,827	+				-0.6
5,668,827	+				-0.8
5,668,828	-				+0.2
5,668,828	-				+1.7
5,668,828	-				+1.1
5,668,828	-				+0.4
5,668,828	-				-1.1
5,668,828	-				-0.7
5,668,828	-				+0.4
5,668,828	-				-1.6
5,668,828	-				-0.3
5,668,828	-				+2.6
5,668,828	-				+1.9
5,668,828	-				+2.7
5,668,828	-				-1.3
5,668,828	-				-0.1
5,668,828	-				+1.2
5,668,828	-				-0.5
5,668,828	-				+1.8
5,668,828	-				-1.1
5,668,828	-				-2.5
5,668,828	-				+1.5
5,668,989	+				+0.8
5,668,989	+				-1.4
5,668,989	+				-1.1
5,668,990	-				+1.3
5,668,990	-				+0.8
5,668,990	-				+0.2
5,669,085	+		PFLU_RS25395	0.16	-1.1
5,669,085	+		PFLU_RS25395	0.16	-1.2
5,669,085	+		PFLU_RS25395	0.16	-0.9
5,669,085	+		PFLU_RS25395	0.16	-1.3
5,669,086	-		PFLU_RS25395	0.16	+0.8
5,669,086	-		PFLU_RS25395	0.16	+1.5
5,669,086	-		PFLU_RS25395	0.16	-0.6
5,669,086	-		PFLU_RS25395	0.16	+1.1
5,669,086	-		PFLU_RS25395	0.16	-1.1
5,669,086	-		PFLU_RS25395	0.16	+0.4
5,669,086	-		PFLU_RS25395	0.16	-0.7
5,669,086	-		PFLU_RS25395	0.16	-0.6
5,669,184	+		PFLU_RS25395	0.32	-3.6
5,669,184	+		PFLU_RS25395	0.32	+0.8
5,669,233	+		PFLU_RS25395	0.40	-0.2
5,669,233	+		PFLU_RS25395	0.40	+0.9
5,669,234	-		PFLU_RS25395	0.40	-1.2