Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS24785 and PFLU_RS24790 overlap by 8 nucleotides PFLU_RS24790 and PFLU_RS24795 are separated by 41 nucleotides
PFLU_RS24785: PFLU_RS24785 - outer membrane protein assembly factor BamB, at 5,554,570 to 5,555,721
_RS24785
PFLU_RS24790: PFLU_RS24790 - tetratricopeptide repeat protein, at 5,555,714 to 5,556,355
_RS24790
PFLU_RS24795: PFLU_RS24795 - histidine--tRNA ligase, at 5,556,397 to 5,557,686
_RS24795
Position (kb) 5555
5556
5557 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5554.736 kb on - strand, within PFLU_RS24785 at 5554.736 kb on - strand, within PFLU_RS24785 at 5554.736 kb on - strand, within PFLU_RS24785 at 5554.742 kb on - strand, within PFLU_RS24785 at 5554.742 kb on - strand, within PFLU_RS24785 at 5554.742 kb on - strand, within PFLU_RS24785 at 5554.742 kb on - strand, within PFLU_RS24785 at 5554.742 kb on - strand, within PFLU_RS24785 at 5554.746 kb on - strand, within PFLU_RS24785 at 5554.746 kb on - strand, within PFLU_RS24785 at 5554.746 kb on - strand, within PFLU_RS24785 at 5554.746 kb on - strand, within PFLU_RS24785 at 5554.746 kb on - strand, within PFLU_RS24785 at 5554.746 kb on - strand, within PFLU_RS24785 at 5554.746 kb on - strand, within PFLU_RS24785 at 5554.859 kb on - strand, within PFLU_RS24785 at 5554.859 kb on - strand, within PFLU_RS24785 at 5554.859 kb on - strand, within PFLU_RS24785 at 5554.859 kb on - strand, within PFLU_RS24785 at 5554.859 kb on - strand, within PFLU_RS24785 at 5554.859 kb on - strand, within PFLU_RS24785 at 5554.859 kb on - strand, within PFLU_RS24785 at 5554.859 kb on - strand, within PFLU_RS24785 at 5554.863 kb on - strand, within PFLU_RS24785 at 5554.863 kb on - strand, within PFLU_RS24785 at 5554.863 kb on - strand, within PFLU_RS24785 at 5554.863 kb on - strand, within PFLU_RS24785 at 5554.896 kb on - strand, within PFLU_RS24785 at 5554.977 kb on - strand, within PFLU_RS24785 at 5554.977 kb on - strand, within PFLU_RS24785 at 5554.977 kb on - strand, within PFLU_RS24785 at 5555.140 kb on - strand, within PFLU_RS24785 at 5555.199 kb on - strand, within PFLU_RS24785 at 5555.408 kb on - strand, within PFLU_RS24785 at 5555.483 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.544 kb on - strand, within PFLU_RS24785 at 5555.754 kb on - strand at 5555.874 kb on - strand, within PFLU_RS24790 at 5556.088 kb on - strand, within PFLU_RS24790 at 5556.088 kb on - strand, within PFLU_RS24790 at 5556.193 kb on - strand, within PFLU_RS24790 at 5556.229 kb on - strand, within PFLU_RS24790 at 5556.229 kb on - strand, within PFLU_RS24790 at 5556.229 kb on - strand, within PFLU_RS24790 at 5556.229 kb on - strand, within PFLU_RS24790 at 5556.362 kb on - strand at 5556.369 kb on - strand at 5556.376 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 5,554,736 - PFLU_RS24785 0.14 -0.1 5,554,736 - PFLU_RS24785 0.14 -2.2 5,554,736 - PFLU_RS24785 0.14 -0.1 5,554,742 - PFLU_RS24785 0.15 -2.1 5,554,742 - PFLU_RS24785 0.15 -1.3 5,554,742 - PFLU_RS24785 0.15 +0.1 5,554,742 - PFLU_RS24785 0.15 -2.3 5,554,742 - PFLU_RS24785 0.15 -1.6 5,554,746 - PFLU_RS24785 0.15 +1.0 5,554,746 - PFLU_RS24785 0.15 -1.3 5,554,746 - PFLU_RS24785 0.15 -3.5 5,554,746 - PFLU_RS24785 0.15 -0.2 5,554,746 - PFLU_RS24785 0.15 -3.7 5,554,746 - PFLU_RS24785 0.15 -3.4 5,554,746 - PFLU_RS24785 0.15 -3.7 5,554,859 - PFLU_RS24785 0.25 -1.7 5,554,859 - PFLU_RS24785 0.25 -1.9 5,554,859 - PFLU_RS24785 0.25 -2.4 5,554,859 - PFLU_RS24785 0.25 -3.6 5,554,859 - PFLU_RS24785 0.25 -2.4 5,554,859 - PFLU_RS24785 0.25 -1.2 5,554,859 - PFLU_RS24785 0.25 -2.7 5,554,859 - PFLU_RS24785 0.25 -3.4 5,554,863 - PFLU_RS24785 0.25 -2.7 5,554,863 - PFLU_RS24785 0.25 -2.2 5,554,863 - PFLU_RS24785 0.25 -0.8 5,554,863 - PFLU_RS24785 0.25 -2.3 5,554,896 - PFLU_RS24785 0.28 -3.1 5,554,977 - PFLU_RS24785 0.35 -2.1 5,554,977 - PFLU_RS24785 0.35 -1.9 5,554,977 - PFLU_RS24785 0.35 -2.2 5,555,140 - PFLU_RS24785 0.49 -1.2 5,555,199 - PFLU_RS24785 0.55 -1.8 5,555,408 - PFLU_RS24785 0.73 -2.7 5,555,483 - PFLU_RS24785 0.79 -1.4 5,555,544 - PFLU_RS24785 0.85 -1.2 5,555,544 - PFLU_RS24785 0.85 -2.9 5,555,544 - PFLU_RS24785 0.85 -1.1 5,555,544 - PFLU_RS24785 0.85 +0.4 5,555,544 - PFLU_RS24785 0.85 -2.3 5,555,544 - PFLU_RS24785 0.85 -0.8 5,555,544 - PFLU_RS24785 0.85 -2.0 5,555,544 - PFLU_RS24785 0.85 -1.5 5,555,544 - PFLU_RS24785 0.85 -2.1 5,555,544 - PFLU_RS24785 0.85 -1.3 5,555,544 - PFLU_RS24785 0.85 -1.7 5,555,544 - PFLU_RS24785 0.85 -1.9 5,555,544 - PFLU_RS24785 0.85 -2.5 5,555,544 - PFLU_RS24785 0.85 -0.4 5,555,544 - PFLU_RS24785 0.85 -2.4 5,555,544 - PFLU_RS24785 0.85 -2.8 5,555,754 - -0.1 5,555,874 - PFLU_RS24790 0.25 -2.5 5,556,088 - PFLU_RS24790 0.58 -0.6 5,556,088 - PFLU_RS24790 0.58 -3.1 5,556,193 - PFLU_RS24790 0.75 -2.3 5,556,229 - PFLU_RS24790 0.80 -2.5 5,556,229 - PFLU_RS24790 0.80 -1.4 5,556,229 - PFLU_RS24790 0.80 -0.8 5,556,229 - PFLU_RS24790 0.80 +0.5 5,556,362 - -2.0 5,556,369 - -1.0 5,556,376 - -0.4
Or see this region's nucleotide sequence