Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS24665 and PFLU_RS24670 are separated by 365 nucleotides PFLU_RS24670 and PFLU_RS24675 are separated by 14 nucleotides PFLU_RS24675 and PFLU_RS24680 are separated by 331 nucleotides PFLU_RS24680 and PFLU_RS24685 are separated by 4 nucleotides
PFLU_RS24665: PFLU_RS24665 - hypothetical protein, at 5,524,293 to 5,524,556
_RS24665
PFLU_RS24670: PFLU_RS24670 - HigA family addiction module antidote protein, at 5,524,922 to 5,525,209
_RS24670
PFLU_RS24675: PFLU_RS24675 - protein killer suppression protein, at 5,525,224 to 5,525,502
_RS24675
PFLU_RS24680: PFLU_RS24680 - NIF3 1, at 5,525,834 to 5,526,145
_RS24680
PFLU_RS24685: PFLU_RS24685 - phosphoribosylformylglycinamidine synthase, at 5,526,150 to 5,530,046
_RS24685
Position (kb) 5524
5525
5526 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5524.002 kb on + strand at 5524.002 kb on + strand at 5524.002 kb on + strand at 5524.002 kb on + strand at 5524.290 kb on + strand at 5524.290 kb on + strand at 5524.290 kb on + strand at 5524.290 kb on + strand at 5524.290 kb on + strand at 5524.317 kb on + strand at 5524.317 kb on + strand at 5524.318 kb on - strand at 5524.491 kb on + strand, within PFLU_RS24665 at 5524.492 kb on - strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.494 kb on + strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.495 kb on - strand, within PFLU_RS24665 at 5524.559 kb on + strand at 5524.560 kb on - strand at 5524.560 kb on - strand at 5524.586 kb on - strand at 5524.707 kb on + strand at 5524.707 kb on + strand at 5524.707 kb on + strand at 5524.724 kb on + strand at 5524.725 kb on - strand at 5524.725 kb on - strand at 5524.725 kb on - strand at 5524.725 kb on - strand at 5524.725 kb on - strand at 5524.725 kb on - strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.726 kb on + strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.727 kb on - strand at 5524.746 kb on - strand at 5524.843 kb on + strand at 5524.843 kb on + strand at 5524.843 kb on + strand at 5524.844 kb on - strand at 5524.924 kb on - strand at 5524.964 kb on - strand, within PFLU_RS24670 at 5525.232 kb on - strand at 5525.240 kb on + strand at 5525.241 kb on - strand at 5525.241 kb on - strand at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.267 kb on + strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.268 kb on - strand, within PFLU_RS24675 at 5525.293 kb on - strand, within PFLU_RS24675 at 5525.316 kb on - strand, within PFLU_RS24675 at 5525.393 kb on - strand, within PFLU_RS24675 at 5525.481 kb on + strand at 5525.481 kb on + strand at 5525.482 kb on - strand at 5525.482 kb on - strand at 5525.493 kb on + strand at 5525.493 kb on + strand at 5525.494 kb on - strand at 5525.522 kb on - strand at 5525.547 kb on - strand at 5525.547 kb on - strand at 5525.547 kb on - strand at 5525.547 kb on - strand at 5525.570 kb on + strand at 5525.570 kb on + strand at 5525.570 kb on + strand at 5525.571 kb on - strand at 5525.768 kb on + strand at 5525.769 kb on - strand at 5525.821 kb on + strand at 5525.821 kb on + strand at 5525.822 kb on - strand at 5525.862 kb on + strand at 5525.862 kb on + strand at 5525.862 kb on + strand at 5525.877 kb on + strand, within PFLU_RS24680 at 5525.878 kb on - strand, within PFLU_RS24680 at 5525.887 kb on + strand, within PFLU_RS24680 at 5525.987 kb on - strand, within PFLU_RS24680 at 5526.054 kb on + strand, within PFLU_RS24680 at 5526.054 kb on + strand, within PFLU_RS24680 at 5526.055 kb on - strand, within PFLU_RS24680 at 5526.055 kb on - strand, within PFLU_RS24680 at 5526.055 kb on - strand, within PFLU_RS24680 at 5526.055 kb on - strand, within PFLU_RS24680 at 5526.055 kb on - strand, within PFLU_RS24680 at 5526.141 kb on + strand at 5526.141 kb on + strand at 5526.141 kb on + strand at 5526.142 kb on - strand at 5526.142 kb on - strand at 5526.151 kb on + strand at 5526.151 kb on + strand at 5526.151 kb on + strand at 5526.151 kb on + strand at 5526.151 kb on + strand at 5526.151 kb on + strand at 5526.151 kb on + strand at 5526.151 kb on + strand at 5526.152 kb on - strand at 5526.152 kb on - strand at 5526.152 kb on - strand at 5526.152 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 5,524,002 + -0.9 5,524,002 + -0.7 5,524,002 + +1.9 5,524,002 + -0.6 5,524,290 + +0.8 5,524,290 + +0.9 5,524,290 + -0.2 5,524,290 + -0.6 5,524,290 + +0.9 5,524,317 + +0.3 5,524,317 + -0.0 5,524,318 - -3.0 5,524,491 + PFLU_RS24665 0.75 +1.6 5,524,492 - PFLU_RS24665 0.75 +0.7 5,524,494 + PFLU_RS24665 0.76 -0.0 5,524,494 + PFLU_RS24665 0.76 +0.1 5,524,494 + PFLU_RS24665 0.76 +0.3 5,524,494 + PFLU_RS24665 0.76 +1.9 5,524,494 + PFLU_RS24665 0.76 -3.2 5,524,494 + PFLU_RS24665 0.76 -1.3 5,524,494 + PFLU_RS24665 0.76 -0.1 5,524,494 + PFLU_RS24665 0.76 -2.8 5,524,494 + PFLU_RS24665 0.76 -1.8 5,524,494 + PFLU_RS24665 0.76 +1.3 5,524,494 + PFLU_RS24665 0.76 +0.4 5,524,495 - PFLU_RS24665 0.77 +0.8 5,524,495 - PFLU_RS24665 0.77 +0.1 5,524,495 - PFLU_RS24665 0.77 +0.7 5,524,495 - PFLU_RS24665 0.77 +0.8 5,524,495 - PFLU_RS24665 0.77 -0.8 5,524,495 - PFLU_RS24665 0.77 -3.4 5,524,495 - PFLU_RS24665 0.77 +1.7 5,524,495 - PFLU_RS24665 0.77 +0.0 5,524,495 - PFLU_RS24665 0.77 -2.5 5,524,495 - PFLU_RS24665 0.77 +0.1 5,524,495 - PFLU_RS24665 0.77 -2.6 5,524,495 - PFLU_RS24665 0.77 -1.6 5,524,495 - PFLU_RS24665 0.77 +2.2 5,524,495 - PFLU_RS24665 0.77 +1.1 5,524,495 - PFLU_RS24665 0.77 +1.6 5,524,495 - PFLU_RS24665 0.77 +0.8 5,524,495 - PFLU_RS24665 0.77 +1.3 5,524,559 + -1.1 5,524,560 - +2.3 5,524,560 - +0.3 5,524,586 - -2.8 5,524,707 + -0.6 5,524,707 + -0.6 5,524,707 + -0.0 5,524,724 + +0.0 5,524,725 - +0.9 5,524,725 - +2.2 5,524,725 - +0.0 5,524,725 - -0.6 5,524,725 - +0.6 5,524,725 - -1.3 5,524,726 + -1.3 5,524,726 + +2.2 5,524,726 + +1.5 5,524,726 + -0.5 5,524,726 + +1.4 5,524,726 + -0.9 5,524,726 + -0.2 5,524,726 + +1.7 5,524,726 + +1.8 5,524,726 + -1.0 5,524,726 + +1.1 5,524,727 - +0.9 5,524,727 - -2.3 5,524,727 - -1.0 5,524,727 - +0.7 5,524,727 - -2.3 5,524,727 - -2.0 5,524,727 - +2.3 5,524,727 - +0.7 5,524,727 - -1.1 5,524,727 - +0.7 5,524,727 - +0.2 5,524,746 - -0.7 5,524,843 + +0.3 5,524,843 + -0.3 5,524,843 + +0.1 5,524,844 - -2.3 5,524,924 - -0.5 5,524,964 - PFLU_RS24670 0.15 -1.6 5,525,232 - +0.4 5,525,240 + -0.8 5,525,241 - -3.0 5,525,241 - +0.2 5,525,267 + PFLU_RS24675 0.15 -0.6 5,525,267 + PFLU_RS24675 0.15 +1.0 5,525,267 + PFLU_RS24675 0.15 +0.9 5,525,267 + PFLU_RS24675 0.15 +0.6 5,525,267 + PFLU_RS24675 0.15 -0.5 5,525,267 + PFLU_RS24675 0.15 +0.3 5,525,267 + PFLU_RS24675 0.15 -0.4 5,525,267 + PFLU_RS24675 0.15 +0.3 5,525,267 + PFLU_RS24675 0.15 +0.4 5,525,267 + PFLU_RS24675 0.15 +0.0 5,525,267 + PFLU_RS24675 0.15 +3.8 5,525,267 + PFLU_RS24675 0.15 -1.9 5,525,267 + PFLU_RS24675 0.15 -0.3 5,525,267 + PFLU_RS24675 0.15 -2.1 5,525,268 - PFLU_RS24675 0.16 +0.1 5,525,268 - PFLU_RS24675 0.16 +1.0 5,525,268 - PFLU_RS24675 0.16 +2.7 5,525,268 - PFLU_RS24675 0.16 -0.3 5,525,268 - PFLU_RS24675 0.16 +3.1 5,525,268 - PFLU_RS24675 0.16 +1.6 5,525,268 - PFLU_RS24675 0.16 -0.7 5,525,268 - PFLU_RS24675 0.16 -1.0 5,525,268 - PFLU_RS24675 0.16 +1.0 5,525,268 - PFLU_RS24675 0.16 +0.5 5,525,268 - PFLU_RS24675 0.16 +2.2 5,525,268 - PFLU_RS24675 0.16 -1.2 5,525,268 - PFLU_RS24675 0.16 -1.1 5,525,268 - PFLU_RS24675 0.16 +0.5 5,525,293 - PFLU_RS24675 0.25 +0.5 5,525,316 - PFLU_RS24675 0.33 -0.6 5,525,393 - PFLU_RS24675 0.61 +1.3 5,525,481 + -2.5 5,525,481 + +1.6 5,525,482 - -1.0 5,525,482 - +0.1 5,525,493 + -1.3 5,525,493 + +1.0 5,525,494 - +1.3 5,525,522 - +1.2 5,525,547 - +0.6 5,525,547 - -1.6 5,525,547 - -0.0 5,525,547 - +3.0 5,525,570 + -0.1 5,525,570 + -3.0 5,525,570 + +0.5 5,525,571 - +1.2 5,525,768 + +0.0 5,525,769 - -0.1 5,525,821 + +1.5 5,525,821 + +0.6 5,525,822 - -1.8 5,525,862 + +1.8 5,525,862 + -0.3 5,525,862 + -0.5 5,525,877 + PFLU_RS24680 0.14 -0.0 5,525,878 - PFLU_RS24680 0.14 +0.5 5,525,887 + PFLU_RS24680 0.17 -1.5 5,525,987 - PFLU_RS24680 0.49 -0.0 5,526,054 + PFLU_RS24680 0.71 -0.7 5,526,054 + PFLU_RS24680 0.71 -0.5 5,526,055 - PFLU_RS24680 0.71 +1.8 5,526,055 - PFLU_RS24680 0.71 -0.2 5,526,055 - PFLU_RS24680 0.71 -2.8 5,526,055 - PFLU_RS24680 0.71 +2.0 5,526,055 - PFLU_RS24680 0.71 +0.3 5,526,141 + +0.8 5,526,141 + -0.2 5,526,141 + -0.3 5,526,142 - -0.8 5,526,142 - -2.8 5,526,151 + -1.1 5,526,151 + +1.1 5,526,151 + -0.1 5,526,151 + +1.8 5,526,151 + +1.3 5,526,151 + +1.0 5,526,151 + +1.8 5,526,151 + +0.5 5,526,152 - -0.3 5,526,152 - -0.3 5,526,152 - +0.4 5,526,152 - +0.4
Or see this region's nucleotide sequence