Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS24475

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
5,481,814	+		PFLU_RS24465	0.58	-0.3
5,481,814	+		PFLU_RS24465	0.58	+0.8
5,481,814	+		PFLU_RS24465	0.58	+1.8
5,481,815	-		PFLU_RS24465	0.58	-1.5
5,481,815	-		PFLU_RS24465	0.58	-0.4
5,481,815	-		PFLU_RS24465	0.58	+1.4
5,481,844	+		PFLU_RS24465	0.61	-0.6
5,481,844	+		PFLU_RS24465	0.61	+0.5
5,481,844	+		PFLU_RS24465	0.61	+0.1
5,481,844	+		PFLU_RS24465	0.61	+1.0
5,481,844	+		PFLU_RS24465	0.61	-2.5
5,481,845	-		PFLU_RS24465	0.61	+0.3
5,481,845	-		PFLU_RS24465	0.61	-2.4
5,481,845	-		PFLU_RS24465	0.61	+1.1
5,481,845	-		PFLU_RS24465	0.61	+0.1
5,481,845	-		PFLU_RS24465	0.61	-1.3
5,481,845	-		PFLU_RS24465	0.61	+1.0
5,481,845	-		PFLU_RS24465	0.61	-0.5
5,481,921	-		PFLU_RS24465	0.68	+1.6
5,482,036	-		PFLU_RS24465	0.80	+1.9
5,482,096	+		PFLU_RS24465	0.86	+0.5
5,482,097	-		PFLU_RS24465	0.86	-0.6
5,482,118	+		PFLU_RS24465	0.88	-1.5
5,482,118	+		PFLU_RS24465	0.88	-1.5
5,482,118	+		PFLU_RS24465	0.88	+2.5
5,482,118	+		PFLU_RS24465	0.88	+1.1
5,482,118	+		PFLU_RS24465	0.88	+0.3
5,482,119	-		PFLU_RS24465	0.88	+2.2
5,482,119	-		PFLU_RS24465	0.88	-0.2
5,482,119	-		PFLU_RS24465	0.88	+1.9
5,482,178	+				+2.0
5,482,178	+				-1.0
5,482,179	-				+1.6
5,482,179	-				-1.0
5,482,179	-				+1.0
5,482,241	+				+0.7
5,482,241	+				+3.2
5,482,241	+				-0.7
5,482,241	+				+2.4
5,482,241	+				+0.9
5,482,241	+				+1.6
5,482,241	+				+0.5
5,482,241	+				+0.2
5,482,241	+				-2.9
5,482,241	+				+1.2
5,482,241	+				-1.3
5,482,242	-				-3.7
5,482,242	-				+1.2
5,482,242	-				+0.7
5,482,242	-				-1.9
5,482,242	-				+0.4
5,482,242	-				+0.6
5,482,242	-				+1.2
5,482,242	-				-1.0
5,482,242	-				-0.2
5,482,242	-				-0.8
5,482,242	-				+2.1
5,482,242	-				+0.5
5,482,289	+				-0.1
5,482,289	+				+0.5
5,482,289	+				-0.6
5,482,289	+				-1.2
5,482,289	+				+1.0
5,482,289	+				+1.1
5,482,289	+				+2.3
5,482,290	-				+0.0
5,482,294	-				-1.7
5,482,294	-				+0.0
5,482,294	-				+0.9
5,482,301	+				-0.2
5,482,301	+				+1.8
5,482,301	+				+0.8
5,482,301	+				+2.8
5,482,301	+				-0.6
5,482,302	-				+0.2
5,482,302	-				-2.6
5,482,302	-				+2.1
5,482,302	-				-2.0
5,482,302	-				+0.5
5,482,368	-				-1.2
5,482,394	+				+1.4
5,482,395	-				+1.9
5,482,410	-				-0.9
5,482,410	-				-1.1
5,482,410	-				+0.0
5,482,462	-		PFLU_RS24470	0.23	-2.5
5,482,462	-		PFLU_RS24470	0.23	-0.6
5,482,606	+		PFLU_RS24470	0.60	-0.9
5,482,606	+		PFLU_RS24470	0.60	+0.1
5,482,606	+		PFLU_RS24470	0.60	-0.3
5,482,607	-		PFLU_RS24470	0.61	-0.2
5,482,607	-		PFLU_RS24470	0.61	+0.5
5,482,627	+		PFLU_RS24470	0.66	-0.4
5,482,627	+		PFLU_RS24470	0.66	+1.1
5,482,627	+		PFLU_RS24470	0.66	+0.8
5,482,715	+		PFLU_RS24470	0.89	+0.2
5,482,756	-				+0.5
5,482,857	-				+0.2
5,482,894	+				-3.4
5,482,894	+				-1.1
5,482,894	+				-0.6
5,482,894	+				-2.5
5,482,894	+				-2.8
5,482,894	+				-2.8
5,482,894	+				-2.9
5,482,894	+				-0.5
5,482,894	+				-1.0
5,482,894	+				-3.1
5,482,894	+				-0.6
5,482,894	+				-2.2
5,482,894	+				-3.5
5,482,894	+				-2.3
5,482,894	+				-3.0
5,482,894	+				-3.9
5,482,894	+				-3.3
5,482,894	+				-2.8
5,482,895	-				-1.7
5,482,895	-				-3.8
5,482,895	-				-2.3
5,482,895	-				-2.8
5,482,895	-				+0.1
5,482,895	-				-2.5
5,482,895	-				-2.7
5,482,895	-				-1.3
5,482,895	-				-1.4
5,482,895	-				-2.9
5,482,895	-				-2.1
5,482,895	-				-2.0
5,482,987	+		PFLU_RS24475	0.12	-1.4
5,482,987	+		PFLU_RS24475	0.12	-2.3
5,482,988	-		PFLU_RS24475	0.12	-1.7
5,482,988	-		PFLU_RS24475	0.12	-2.8
5,482,988	-		PFLU_RS24475	0.12	-1.5
5,482,988	-		PFLU_RS24475	0.12	-3.4
5,482,988	-		PFLU_RS24475	0.12	-1.7
5,482,988	-		PFLU_RS24475	0.12	-2.7
5,482,995	+		PFLU_RS24475	0.13	-2.4
5,482,996	-		PFLU_RS24475	0.13	-2.6
5,482,996	-		PFLU_RS24475	0.13	-2.8
5,482,996	-		PFLU_RS24475	0.13	-3.5
5,483,263	+		PFLU_RS24475	0.30	+1.8
5,483,263	+		PFLU_RS24475	0.30	-1.2
5,483,263	+		PFLU_RS24475	0.30	-1.9
5,483,263	+		PFLU_RS24475	0.30	-2.5
5,483,263	+		PFLU_RS24475	0.30	-2.9
5,483,263	+		PFLU_RS24475	0.30	+0.6
5,483,263	+		PFLU_RS24475	0.30	-3.1
5,483,263	+		PFLU_RS24475	0.30	-2.8
5,483,263	+		PFLU_RS24475	0.30	-1.5
5,483,263	+		PFLU_RS24475	0.30	-2.0
5,483,263	+		PFLU_RS24475	0.30	-2.5
5,483,263	+		PFLU_RS24475	0.30	-2.1
5,483,263	+		PFLU_RS24475	0.30	-1.6
5,483,263	+		PFLU_RS24475	0.30	-3.3
5,483,263	+		PFLU_RS24475	0.30	-3.9
5,483,263	+		PFLU_RS24475	0.30	-1.2
5,483,263	+		PFLU_RS24475	0.30	-3.4
5,483,264	-		PFLU_RS24475	0.30	-2.3
5,483,264	-		PFLU_RS24475	0.30	-2.5
5,483,264	-		PFLU_RS24475	0.30	-3.1
5,483,264	-		PFLU_RS24475	0.30	-0.8
5,483,264	-		PFLU_RS24475	0.30	+0.1
5,483,350	+		PFLU_RS24475	0.36	-3.1
5,483,350	+		PFLU_RS24475	0.36	-3.4
5,483,350	+		PFLU_RS24475	0.36	-2.4
5,483,350	+		PFLU_RS24475	0.36	-1.8
5,483,350	+		PFLU_RS24475	0.36	-0.6
5,483,350	+		PFLU_RS24475	0.36	-1.6
5,483,350	+		PFLU_RS24475	0.36	-2.8
5,483,350	+		PFLU_RS24475	0.36	-2.1
5,483,350	+		PFLU_RS24475	0.36	-3.0
5,483,351	-		PFLU_RS24475	0.36	-2.0
5,483,351	-		PFLU_RS24475	0.36	-1.8
5,483,351	-		PFLU_RS24475	0.36	-0.3
5,483,351	-		PFLU_RS24475	0.36	-2.0
5,483,351	-		PFLU_RS24475	0.36	-3.3
5,483,351	-		PFLU_RS24475	0.36	-2.4
5,483,351	-		PFLU_RS24475	0.36	-0.5
5,483,351	-		PFLU_RS24475	0.36	-0.3
5,483,351	-		PFLU_RS24475	0.36	-3.4
5,483,351	-		PFLU_RS24475	0.36	-2.8
5,483,352	+		PFLU_RS24475	0.36	-1.6
5,483,352	+		PFLU_RS24475	0.36	-1.9
5,483,352	+		PFLU_RS24475	0.36	-1.9
5,483,353	-		PFLU_RS24475	0.36	-0.8
5,483,353	-		PFLU_RS24475	0.36	-3.3
5,483,353	-		PFLU_RS24475	0.36	-1.1
5,483,353	-		PFLU_RS24475	0.36	-1.5
5,483,377	+		PFLU_RS24475	0.38	+1.0
5,483,377	+		PFLU_RS24475	0.38	-2.1
5,483,377	+		PFLU_RS24475	0.38	-2.1
5,483,377	+		PFLU_RS24475	0.38	-0.2
5,483,377	+		PFLU_RS24475	0.38	-2.7
5,483,377	+		PFLU_RS24475	0.38	-2.3
5,483,377	+		PFLU_RS24475	0.38	-2.7
5,483,377	+		PFLU_RS24475	0.38	-1.9
5,483,377	+		PFLU_RS24475	0.38	-3.2
5,483,377	+		PFLU_RS24475	0.38	-1.9
5,483,377	+		PFLU_RS24475	0.38	-2.2
5,483,377	+		PFLU_RS24475	0.38	-1.7
5,483,377	+		PFLU_RS24475	0.38	-3.0
5,483,377	+		PFLU_RS24475	0.38	-3.6
5,483,377	+		PFLU_RS24475	0.38	-1.3
5,483,377	+		PFLU_RS24475	0.38	-2.8
5,483,377	+		PFLU_RS24475	0.38	-0.8
5,483,377	+		PFLU_RS24475	0.38	-3.3
5,483,377	+		PFLU_RS24475	0.38	-2.3
5,483,377	+		PFLU_RS24475	0.38	-3.8
5,483,377	+		PFLU_RS24475	0.38	-0.8
5,483,377	+		PFLU_RS24475	0.38	+0.6
5,483,377	+		PFLU_RS24475	0.38	-2.9
5,483,377	+		PFLU_RS24475	0.38	-2.5
5,483,377	+		PFLU_RS24475	0.38	-1.7
5,483,377	+		PFLU_RS24475	0.38	-0.8
5,483,378	-		PFLU_RS24475	0.38	-2.7
5,483,378	-		PFLU_RS24475	0.38	-1.8
5,483,378	-		PFLU_RS24475	0.38	-1.5
5,483,378	-		PFLU_RS24475	0.38	+3.1
5,483,378	-		PFLU_RS24475	0.38	-1.7
5,483,378	-		PFLU_RS24475	0.38	-3.2
5,483,378	-		PFLU_RS24475	0.38	-2.7
5,483,378	-		PFLU_RS24475	0.38	-1.9
5,483,378	-		PFLU_RS24475	0.38	-2.2
5,483,378	-		PFLU_RS24475	0.38	-3.1
5,483,378	-		PFLU_RS24475	0.38	-3.3
5,483,378	-		PFLU_RS24475	0.38	-2.0
5,483,378	-		PFLU_RS24475	0.38	-3.3
5,483,378	-		PFLU_RS24475	0.38	-1.6
5,483,378	-		PFLU_RS24475	0.38	-1.8
5,483,378	-		PFLU_RS24475	0.38	-1.5
5,483,378	-		PFLU_RS24475	0.38	-1.9
5,483,378	-		PFLU_RS24475	0.38	-3.8
5,483,378	-		PFLU_RS24475	0.38	-1.5
5,483,378	-		PFLU_RS24475	0.38	-1.3
5,483,378	-		PFLU_RS24475	0.38	-2.6
5,483,378	-		PFLU_RS24475	0.38	-2.7
5,483,378	-		PFLU_RS24475	0.38	-0.6
5,483,378	-		PFLU_RS24475	0.38	-3.3
5,483,378	-		PFLU_RS24475	0.38	-2.3
5,483,378	-		PFLU_RS24475	0.38	-3.0
5,483,378	-		PFLU_RS24475	0.38	-2.6
5,483,378	-		PFLU_RS24475	0.38	-3.7
5,483,378	-		PFLU_RS24475	0.38	-2.1
5,483,378	-		PFLU_RS24475	0.38	-3.4
5,483,378	-		PFLU_RS24475	0.38	+1.0
5,483,647	+		PFLU_RS24475	0.55	-3.0
5,483,647	+		PFLU_RS24475	0.55	-3.0
5,483,647	+		PFLU_RS24475	0.55	+0.4
5,483,647	+		PFLU_RS24475	0.55	-4.0
5,483,647	+		PFLU_RS24475	0.55	-1.9
5,483,647	+		PFLU_RS24475	0.55	-2.5
5,483,647	+		PFLU_RS24475	0.55	+0.2
5,483,647	+		PFLU_RS24475	0.55	-2.6
5,483,648	-		PFLU_RS24475	0.55	-2.9
5,483,648	-		PFLU_RS24475	0.55	-3.7
5,483,648	-		PFLU_RS24475	0.55	-2.5
5,483,648	-		PFLU_RS24475	0.55	-1.4
5,483,648	-		PFLU_RS24475	0.55	-3.4
5,483,648	-		PFLU_RS24475	0.55	-0.3
5,483,648	-		PFLU_RS24475	0.55	-1.0
5,483,648	-		PFLU_RS24475	0.55	-2.6
5,483,648	-		PFLU_RS24475	0.55	-0.4
5,483,648	-		PFLU_RS24475	0.55	-2.3
5,483,648	-		PFLU_RS24475	0.55	-2.7
5,483,648	-		PFLU_RS24475	0.55	-1.6
5,483,648	-		PFLU_RS24475	0.55	-3.0
5,483,648	-		PFLU_RS24475	0.55	-1.7
5,483,648	-		PFLU_RS24475	0.55	+0.4
5,483,648	-		PFLU_RS24475	0.55	-1.2
5,483,648	-		PFLU_RS24475	0.55	-2.3
5,483,648	-		PFLU_RS24475	0.55	-2.0
5,483,649	+		PFLU_RS24475	0.55	-1.6
5,483,650	-		PFLU_RS24475	0.55	-2.4
5,483,753	+		PFLU_RS24475	0.62	-3.8
5,483,754	-		PFLU_RS24475	0.62	-2.2
5,483,754	-		PFLU_RS24475	0.62	-3.1
5,483,754	-		PFLU_RS24475	0.62	-0.5
5,483,754	-		PFLU_RS24475	0.62	-2.9
5,483,754	-		PFLU_RS24475	0.62	-3.4
5,483,779	+		PFLU_RS24475	0.64	-3.2
5,483,779	+		PFLU_RS24475	0.64	-2.3
5,483,779	+		PFLU_RS24475	0.64	-1.9
5,483,779	+		PFLU_RS24475	0.64	-2.0
5,483,779	+		PFLU_RS24475	0.64	-3.2
5,483,780	-		PFLU_RS24475	0.64	-2.9
5,483,780	-		PFLU_RS24475	0.64	-2.5
5,483,780	-		PFLU_RS24475	0.64	-2.7
5,483,780	-		PFLU_RS24475	0.64	-1.7
5,483,807	+		PFLU_RS24475	0.66	-2.9
5,483,808	-		PFLU_RS24475	0.66	-2.0
5,483,824	+		PFLU_RS24475	0.67	-1.6
5,483,824	+		PFLU_RS24475	0.67	-3.2
5,483,824	+		PFLU_RS24475	0.67	-1.9
5,483,825	-		PFLU_RS24475	0.67	-2.6
5,484,094	+		PFLU_RS24475	0.84	-3.2
5,484,095	-		PFLU_RS24475	0.84	-2.5
5,484,095	-		PFLU_RS24475	0.84	-1.2
5,484,095	-		PFLU_RS24475	0.84	-3.4
5,484,187	+				-2.5
5,484,287	-				-1.7
5,484,348	+				+0.7
5,484,348	+				+1.7
5,484,349	-				+0.4
5,484,388	+				+1.5
5,484,389	-				-1.4
5,484,391	-				+0.5
5,484,391	-				+1.7
5,484,391	-				+1.5
5,484,391	-				-0.3
5,484,438	+				+2.2
5,484,438	+				+0.4
5,484,438	+				-2.1
5,484,439	-				+0.4
5,484,453	-				+1.5
5,484,453	-				+1.1
5,484,488	-				-2.3
5,484,488	-				-2.7
5,484,488	-				-2.0
5,484,488	-				-0.2