Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS24120

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
5,397,923	+				-0.0
5,397,923	+				+0.4
5,397,924	-				-0.1
5,397,924	-				+0.7
5,397,924	-				-0.1
5,397,924	-				-0.8
5,397,929	+				+3.2
5,397,929	+				+2.8
5,397,929	+				+1.0
5,397,929	+				+1.7
5,397,929	+				-0.0
5,397,929	+				+6.6
5,397,929	+				+0.4
5,397,929	+				+2.7
5,397,929	+				+1.0
5,397,930	-				-0.2
5,397,930	-				-3.3
5,397,930	-				-1.0
5,397,930	-				+0.8
5,397,930	-				-0.1
5,397,930	-				-1.9
5,397,930	-				-2.4
5,397,930	-				-0.1
5,397,930	-				-2.1
5,397,930	-				+1.5
5,397,930	-				+1.8
5,397,930	-				-0.3
5,397,930	-				+2.9
5,397,930	-				-0.9
5,397,930	-				+0.6
5,397,930	-				+1.0
5,397,930	-				+1.1
5,397,930	-				+2.7
5,397,930	-				+0.3
5,397,930	-				+0.2
5,397,930	-				+1.6
5,397,930	-				+1.6
5,397,930	-				-2.9
5,397,930	-				-0.8
5,397,930	-				-0.5
5,397,930	-				-1.1
5,397,930	-				-2.2
5,397,930	-				+0.4
5,397,930	-				-1.2
5,398,020	+				+3.0
5,398,020	+				+2.0
5,398,021	-				+0.7
5,398,021	-				+0.7
5,398,021	-				-0.5
5,398,021	-				+2.2
5,398,021	-				-1.3
5,398,021	-				+0.6
5,398,021	-				+0.5
5,398,021	-				-0.2
5,398,021	-				-1.7
5,398,021	-				-2.0
5,398,021	-				-1.2
5,398,021	-				+2.7
5,398,021	-				+1.1
5,398,021	-				-0.5
5,398,021	-				+1.6
5,398,022	+				-2.8
5,398,023	-				-1.0
5,398,023	-				+0.8
5,398,023	-				+4.0
5,398,023	-				+2.5
5,398,023	-				-3.1
5,398,023	-				+0.2
5,398,023	-				+1.0
5,398,023	-				-0.3
5,398,023	-				+0.1
5,398,023	-				-1.2
5,398,023	-				-2.4
5,398,081	+				-0.2
5,398,081	+				-0.3
5,398,082	-				+1.6
5,398,082	-				+0.4
5,398,233	+				+0.3
5,398,233	+				-1.1
5,398,233	+				-0.4
5,398,233	+				+0.4
5,398,263	+				+0.5
5,398,263	+				+0.2
5,398,264	-				-1.2
5,398,383	+		PFLU_RS24115	0.35	+0.8
5,398,383	+		PFLU_RS24115	0.35	-0.6
5,398,383	+		PFLU_RS24115	0.35	+0.0
5,398,383	+		PFLU_RS24115	0.35	+0.0
5,398,383	+		PFLU_RS24115	0.35	-2.8
5,398,383	+		PFLU_RS24115	0.35	-0.6
5,398,383	+		PFLU_RS24115	0.35	-2.5
5,398,383	+		PFLU_RS24115	0.35	+0.1
5,398,383	+		PFLU_RS24115	0.35	-1.8
5,398,383	+		PFLU_RS24115	0.35	+0.1
5,398,383	+		PFLU_RS24115	0.35	+1.2
5,398,384	-		PFLU_RS24115	0.35	+1.0
5,398,384	-		PFLU_RS24115	0.35	-0.1
5,398,384	-		PFLU_RS24115	0.35	-2.2
5,398,384	-		PFLU_RS24115	0.35	-0.3
5,398,384	-		PFLU_RS24115	0.35	+0.7
5,398,384	-		PFLU_RS24115	0.35	+1.7
5,398,384	-		PFLU_RS24115	0.35	+0.5
5,398,384	-		PFLU_RS24115	0.35	+0.9
5,398,384	-		PFLU_RS24115	0.35	+1.4
5,398,384	-		PFLU_RS24115	0.35	+0.5
5,398,424	+		PFLU_RS24115	0.47	+1.1
5,398,425	-		PFLU_RS24115	0.47	-0.2
5,398,438	+		PFLU_RS24115	0.51	+1.0
5,398,438	+		PFLU_RS24115	0.51	+2.8
5,398,439	-		PFLU_RS24115	0.51	+1.5
5,398,439	-		PFLU_RS24115	0.51	+0.7
5,398,446	+		PFLU_RS24115	0.53	+1.0
5,398,447	-		PFLU_RS24115	0.54	-1.2
5,398,447	-		PFLU_RS24115	0.54	-0.6
5,398,447	-		PFLU_RS24115	0.54	+0.7
5,398,553	+		PFLU_RS24115	0.84	+0.9
5,398,558	+		PFLU_RS24115	0.86	+1.2
5,398,559	-		PFLU_RS24115	0.86	+0.0
5,398,559	-		PFLU_RS24115	0.86	+0.1
5,398,606	+				-0.6
5,398,606	+				+0.0
5,398,606	+				-0.3
5,398,606	+				-1.0
5,398,606	+				+0.5
5,398,606	+				+3.0
5,398,606	+				-0.7
5,398,606	+				+0.3
5,398,606	+				-0.3
5,398,606	+				-0.4
5,398,606	+				+2.8
5,398,606	+				-0.5
5,398,606	+				-1.8
5,398,606	+				-0.2
5,398,606	+				+3.0
5,398,606	+				+1.1
5,398,606	+				+1.0
5,398,606	+				+0.7
5,398,606	+				-2.7
5,398,606	+				-2.3
5,398,606	+				+0.8
5,398,606	+				-0.8
5,398,606	+				-0.6
5,398,606	+				+3.4
5,398,606	+				+1.3
5,398,606	+				+1.3
5,398,606	+				-0.8
5,398,606	+				-2.1
5,398,606	+				-0.8
5,398,606	+				-3.5
5,398,606	+				+0.6
5,398,607	-				+0.1
5,398,607	-				-1.2
5,398,607	-				-0.6
5,398,607	-				+1.0
5,398,607	-				-2.2
5,398,607	-				+1.0
5,398,607	-				-2.6
5,398,607	-				-1.3
5,398,607	-				-0.1
5,398,607	-				-3.7
5,398,607	-				-2.0
5,398,607	-				-0.6
5,398,607	-				+1.8
5,398,607	-				-2.7
5,398,607	-				+2.4
5,398,607	-				-0.0
5,398,607	-				-0.4
5,398,607	-				+1.7
5,398,607	-				-0.3
5,398,607	-				-0.5
5,398,666	+				-0.4
5,398,666	+				-0.3
5,398,666	+				-2.3
5,398,667	-				+0.5
5,398,667	-				-2.1
5,398,668	+				+0.3
5,398,668	+				+0.3
5,398,668	+				-3.5
5,398,669	-				-0.0
5,398,669	-				+0.7
5,398,712	+				+1.0
5,398,712	+				-0.8
5,398,712	+				-0.2
5,398,712	+				-0.8
5,398,712	+				-0.2
5,398,713	-				-0.3
5,398,718	+				-0.4
5,398,718	+				+3.8
5,398,718	+				-2.1
5,398,719	-				-3.0
5,398,719	-				-0.1
5,398,789	-				+0.1
5,398,789	-				+0.6
5,398,789	-				-1.2
5,398,843	+		PFLU_RS24120	0.12	-1.0
5,398,843	+		PFLU_RS24120	0.12	+0.9
5,398,843	+		PFLU_RS24120	0.12	+1.9
5,398,843	+		PFLU_RS24120	0.12	-0.7
5,398,843	+		PFLU_RS24120	0.12	-1.0
5,398,844	-		PFLU_RS24120	0.12	-0.4
5,398,844	-		PFLU_RS24120	0.12	+0.2
5,398,844	-		PFLU_RS24120	0.12	+0.1
5,398,844	-		PFLU_RS24120	0.12	+0.9
5,398,844	-		PFLU_RS24120	0.12	-0.2
5,399,010	+		PFLU_RS24120	0.47	+2.0
5,399,010	+		PFLU_RS24120	0.47	+0.1
5,399,010	+		PFLU_RS24120	0.47	+0.2
5,399,010	+		PFLU_RS24120	0.47	-2.7
5,399,010	+		PFLU_RS24120	0.47	+0.0
5,399,010	+		PFLU_RS24120	0.47	-0.8
5,399,011	-		PFLU_RS24120	0.47	-0.6
5,399,011	-		PFLU_RS24120	0.47	-2.6
5,399,011	-		PFLU_RS24120	0.47	+0.2
5,399,011	-		PFLU_RS24120	0.47	-0.0
5,399,011	-		PFLU_RS24120	0.47	+0.7
5,399,011	-		PFLU_RS24120	0.47	-1.6
5,399,011	-		PFLU_RS24120	0.47	-1.4
5,399,011	-		PFLU_RS24120	0.47	-0.9
5,399,011	-		PFLU_RS24120	0.47	-0.3
5,399,011	-		PFLU_RS24120	0.47	-2.6
5,399,011	-		PFLU_RS24120	0.47	+2.0
5,399,019	+		PFLU_RS24120	0.49	+0.4
5,399,019	+		PFLU_RS24120	0.49	+1.4
5,399,020	-		PFLU_RS24120	0.49	-1.1
5,399,020	-		PFLU_RS24120	0.49	+1.0
5,399,020	-		PFLU_RS24120	0.49	+1.3
5,399,020	-		PFLU_RS24120	0.49	+0.8
5,399,020	-		PFLU_RS24120	0.49	-1.2
5,399,094	+		PFLU_RS24120	0.65	+0.3
5,399,094	+		PFLU_RS24120	0.65	-2.0
5,399,094	+		PFLU_RS24120	0.65	+0.9
5,399,095	-		PFLU_RS24120	0.65	+1.3
5,399,095	-		PFLU_RS24120	0.65	+0.8
5,399,095	-		PFLU_RS24120	0.65	-0.9
5,399,095	-		PFLU_RS24120	0.65	+0.6
5,399,095	-		PFLU_RS24120	0.65	+0.1
5,399,095	-		PFLU_RS24120	0.65	+1.0
5,399,095	-		PFLU_RS24120	0.65	-0.5
5,399,122	+		PFLU_RS24120	0.71	+2.8
5,399,172	+		PFLU_RS24120	0.81	+1.4
5,399,172	+		PFLU_RS24120	0.81	+1.1
5,399,172	+		PFLU_RS24120	0.81	+1.4
5,399,172	+		PFLU_RS24120	0.81	+1.5
5,399,172	+		PFLU_RS24120	0.81	+1.4
5,399,172	+		PFLU_RS24120	0.81	-1.2
5,399,173	-		PFLU_RS24120	0.81	+3.0
5,399,173	-		PFLU_RS24120	0.81	+2.1
5,399,173	-		PFLU_RS24120	0.81	+1.9
5,399,177	+		PFLU_RS24120	0.82	-2.3
5,399,177	+		PFLU_RS24120	0.82	-1.9
5,399,177	+		PFLU_RS24120	0.82	-0.3
5,399,177	+		PFLU_RS24120	0.82	-0.3
5,399,177	+		PFLU_RS24120	0.82	-0.1
5,399,177	+		PFLU_RS24120	0.82	-1.6
5,399,177	+		PFLU_RS24120	0.82	-1.2
5,399,177	+		PFLU_RS24120	0.82	+0.7
5,399,177	+		PFLU_RS24120	0.82	-3.2
5,399,177	+		PFLU_RS24120	0.82	-1.7
5,399,177	+		PFLU_RS24120	0.82	+0.1
5,399,177	+		PFLU_RS24120	0.82	-1.3
5,399,177	+		PFLU_RS24120	0.82	+0.8
5,399,177	+		PFLU_RS24120	0.82	-0.7
5,399,177	+		PFLU_RS24120	0.82	+0.7
5,399,177	+		PFLU_RS24120	0.82	-3.4
5,399,177	+		PFLU_RS24120	0.82	-0.8
5,399,177	+		PFLU_RS24120	0.82	+1.1
5,399,177	+		PFLU_RS24120	0.82	+2.3
5,399,177	+		PFLU_RS24120	0.82	+0.2
5,399,177	+		PFLU_RS24120	0.82	+0.4
5,399,177	+		PFLU_RS24120	0.82	+0.1
5,399,177	+		PFLU_RS24120	0.82	-1.1
5,399,177	+		PFLU_RS24120	0.82	+1.8
5,399,177	+		PFLU_RS24120	0.82	+2.2
5,399,177	+		PFLU_RS24120	0.82	-1.7
5,399,177	+		PFLU_RS24120	0.82	+0.9
5,399,177	+		PFLU_RS24120	0.82	-0.0
5,399,177	+		PFLU_RS24120	0.82	+0.0
5,399,177	+		PFLU_RS24120	0.82	-3.4
5,399,178	-		PFLU_RS24120	0.82	+0.8
5,399,178	-		PFLU_RS24120	0.82	-0.8
5,399,178	-		PFLU_RS24120	0.82	+0.5
5,399,178	-		PFLU_RS24120	0.82	-1.3
5,399,178	-		PFLU_RS24120	0.82	-0.9
5,399,178	-		PFLU_RS24120	0.82	+1.2
5,399,178	-		PFLU_RS24120	0.82	+0.7
5,399,178	-		PFLU_RS24120	0.82	+0.4
5,399,178	-		PFLU_RS24120	0.82	-0.0
5,399,178	-		PFLU_RS24120	0.82	-0.8
5,399,178	-		PFLU_RS24120	0.82	-0.1
5,399,178	-		PFLU_RS24120	0.82	+0.3
5,399,178	-		PFLU_RS24120	0.82	+1.8
5,399,178	-		PFLU_RS24120	0.82	+1.3
5,399,178	-		PFLU_RS24120	0.82	-2.4
5,399,178	-		PFLU_RS24120	0.82	-0.4
5,399,178	-		PFLU_RS24120	0.82	+0.7
5,399,178	-		PFLU_RS24120	0.82	+1.7
5,399,178	-		PFLU_RS24120	0.82	+1.5
5,399,178	-		PFLU_RS24120	0.82	+0.2
5,399,178	-		PFLU_RS24120	0.82	-0.3
5,399,178	-		PFLU_RS24120	0.82	-0.8
5,399,178	-		PFLU_RS24120	0.82	+1.8
5,399,178	-		PFLU_RS24120	0.82	-2.0
5,399,178	-		PFLU_RS24120	0.82	+3.7
5,399,181	+		PFLU_RS24120	0.83	+1.2
5,399,181	+		PFLU_RS24120	0.83	+0.4
5,399,181	+		PFLU_RS24120	0.83	+0.1
5,399,181	+		PFLU_RS24120	0.83	+1.7
5,399,181	+		PFLU_RS24120	0.83	+1.7
5,399,181	+		PFLU_RS24120	0.83	-3.1
5,399,181	+		PFLU_RS24120	0.83	-0.3
5,399,181	+		PFLU_RS24120	0.83	-1.2
5,399,181	+		PFLU_RS24120	0.83	-0.5
5,399,181	+		PFLU_RS24120	0.83	-0.8
5,399,181	+		PFLU_RS24120	0.83	-2.4
5,399,181	+		PFLU_RS24120	0.83	-1.0
5,399,181	+		PFLU_RS24120	0.83	-0.9
5,399,181	+		PFLU_RS24120	0.83	+1.1
5,399,181	+		PFLU_RS24120	0.83	+2.0
5,399,181	+		PFLU_RS24120	0.83	+0.6
5,399,181	+		PFLU_RS24120	0.83	+0.4
5,399,181	+		PFLU_RS24120	0.83	+1.1
5,399,181	+		PFLU_RS24120	0.83	-0.4
5,399,181	+		PFLU_RS24120	0.83	-2.2
5,399,181	+		PFLU_RS24120	0.83	-1.3
5,399,181	+		PFLU_RS24120	0.83	-0.5
5,399,181	+		PFLU_RS24120	0.83	-3.2
5,399,181	+		PFLU_RS24120	0.83	-0.0
5,399,181	+		PFLU_RS24120	0.83	+2.4
5,399,181	+		PFLU_RS24120	0.83	-3.0
5,399,181	+		PFLU_RS24120	0.83	+0.6
5,399,181	+		PFLU_RS24120	0.83	-1.6
5,399,181	+		PFLU_RS24120	0.83	-2.5
5,399,181	+		PFLU_RS24120	0.83	-0.3
5,399,181	+		PFLU_RS24120	0.83	+0.4
5,399,181	+		PFLU_RS24120	0.83	+1.4
5,399,181	+		PFLU_RS24120	0.83	-0.8
5,399,181	+		PFLU_RS24120	0.83	-1.8
5,399,181	+		PFLU_RS24120	0.83	+0.4
5,399,181	+		PFLU_RS24120	0.83	+1.2
5,399,181	+		PFLU_RS24120	0.83	-0.5
5,399,181	+		PFLU_RS24120	0.83	-0.1
5,399,181	+		PFLU_RS24120	0.83	+0.0
5,399,181	+		PFLU_RS24120	0.83	-2.3
5,399,181	+		PFLU_RS24120	0.83	+0.9
5,399,181	+		PFLU_RS24120	0.83	+0.9
5,399,181	+		PFLU_RS24120	0.83	+0.3
5,399,181	+		PFLU_RS24120	0.83	-0.6
5,399,181	+		PFLU_RS24120	0.83	-2.8
5,399,181	+		PFLU_RS24120	0.83	+0.7
5,399,181	+		PFLU_RS24120	0.83	-0.1
5,399,181	+		PFLU_RS24120	0.83	+0.1
5,399,181	+		PFLU_RS24120	0.83	+1.5
5,399,181	+		PFLU_RS24120	0.83	-2.0
5,399,181	+		PFLU_RS24120	0.83	-0.6
5,399,181	+		PFLU_RS24120	0.83	-0.6
5,399,181	+		PFLU_RS24120	0.83	-3.2
5,399,181	+		PFLU_RS24120	0.83	-0.3
5,399,181	+		PFLU_RS24120	0.83	+1.5
5,399,181	+		PFLU_RS24120	0.83	-3.1
5,399,181	+		PFLU_RS24120	0.83	-1.2
5,399,181	+		PFLU_RS24120	0.83	-0.8
5,399,181	+		PFLU_RS24120	0.83	-0.8
5,399,181	+		PFLU_RS24120	0.83	-1.7
5,399,181	+		PFLU_RS24120	0.83	+1.2
5,399,181	+		PFLU_RS24120	0.83	+1.7
5,399,181	+		PFLU_RS24120	0.83	-2.9
5,399,181	+		PFLU_RS24120	0.83	-3.3
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5,399,182	-		PFLU_RS24120	0.83	-1.7
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5,399,182	-		PFLU_RS24120	0.83	+2.1
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5,399,185	+		PFLU_RS24120	0.84	+1.4
5,399,185	+		PFLU_RS24120	0.84	+2.6
5,399,224	+				-1.3
5,399,224	+				-0.8
5,399,224	+				-2.5
5,399,224	+				+0.8
5,399,224	+				-1.3
5,399,224	+				-2.9
5,399,225	-				+0.4
5,399,225	-				-0.3
5,399,225	-				-0.3
5,399,242	+				-0.1
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5,399,312	+				-1.3
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5,399,313	-				+0.3
5,399,363	-				-3.3
5,399,363	-				+3.1
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5,399,400	+				+4.8
5,399,408	-				+1.0
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5,399,526	+				-3.3
5,399,526	+				-4.0
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5,399,571	+				-2.3
5,399,571	+				-1.8
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5,399,571	+				-2.4
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5,399,727	+				-2.0
5,399,728	-				-3.2
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5,399,903	+		PFLU_RS24125	0.38	-2.1
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5,399,903	+		PFLU_RS24125	0.38	-2.1
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5,400,016	+		PFLU_RS24125	0.57	-1.5
5,400,016	+		PFLU_RS24125	0.57	-1.5
5,400,017	-		PFLU_RS24125	0.57	-1.3
5,400,049	+		PFLU_RS24125	0.62	-1.5
5,400,049	+		PFLU_RS24125	0.62	-2.2
5,400,049	+		PFLU_RS24125	0.62	-1.9
5,400,049	+		PFLU_RS24125	0.62	-2.7
5,400,050	-		PFLU_RS24125	0.62	-1.8
5,400,050	-		PFLU_RS24125	0.62	-3.2
5,400,114	+		PFLU_RS24125	0.73	-1.2
5,400,114	+		PFLU_RS24125	0.73	-1.2
5,400,115	-		PFLU_RS24125	0.73	-2.3