Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS22630

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
5,092,359	+		PFLU_RS22625	0.17	+1.0
5,092,359	+		PFLU_RS22625	0.17	+1.2
5,092,359	+		PFLU_RS22625	0.17	+1.4
5,092,359	+		PFLU_RS22625	0.17	-1.5
5,092,360	-		PFLU_RS22625	0.17	+1.8
5,092,360	-		PFLU_RS22625	0.17	+0.8
5,092,360	-		PFLU_RS22625	0.17	+0.1
5,092,492	+		PFLU_RS22625	0.30	-0.0
5,092,830	+		PFLU_RS22625	0.64	+0.1
5,092,831	-		PFLU_RS22625	0.64	+0.3
5,092,831	-		PFLU_RS22625	0.64	+0.7
5,092,839	+		PFLU_RS22625	0.65	+0.4
5,092,840	-		PFLU_RS22625	0.65	-0.6
5,092,840	-		PFLU_RS22625	0.65	+0.3
5,092,863	+		PFLU_RS22625	0.68	+0.7
5,092,863	+		PFLU_RS22625	0.68	+0.8
5,092,864	-		PFLU_RS22625	0.68	-0.0
5,092,864	-		PFLU_RS22625	0.68	-0.1
5,092,938	+		PFLU_RS22625	0.75	-1.3
5,092,938	+		PFLU_RS22625	0.75	-2.8
5,092,938	+		PFLU_RS22625	0.75	+0.1
5,092,938	+		PFLU_RS22625	0.75	+0.2
5,092,939	-		PFLU_RS22625	0.75	+0.5
5,092,939	-		PFLU_RS22625	0.75	+0.1
5,092,968	+		PFLU_RS22625	0.78	+0.2
5,093,009	-		PFLU_RS22625	0.82	-1.5
5,093,106	+				-1.4
5,093,182	+				-1.4
5,093,182	+				-1.4
5,093,183	-				+0.8
5,093,183	-				+0.7
5,093,237	+				-0.9
5,093,237	+				-1.4
5,093,237	+				+1.4
5,093,237	+				-2.5
5,093,237	+				+0.7
5,093,238	-				-2.2
5,093,238	-				-1.9
5,093,238	-				+1.4
5,093,238	-				-2.2
5,093,238	-				+0.7
5,093,281	+				+0.0
5,093,282	-				+0.6
5,093,282	-				+1.1
5,093,290	+				+0.0
5,093,426	+				-2.3
5,093,426	+				-2.5
5,093,427	-				-3.8
5,093,427	-				-2.8
5,093,427	-				-1.3
5,093,434	+				-0.5
5,093,434	+				-1.1
5,093,434	+				-0.3
5,093,435	-				-1.3
5,093,435	-				-2.0
5,093,435	-				-2.5
5,093,435	-				-1.8
5,093,450	+				-1.3
5,093,450	+				-0.9
5,093,450	+				-2.4
5,093,450	+				+0.8
5,093,496	-				-2.9
5,093,836	+		PFLU_RS22630	0.23	-2.7
5,093,836	+		PFLU_RS22630	0.23	-0.8
5,093,836	+		PFLU_RS22630	0.23	-2.7
5,093,837	-		PFLU_RS22630	0.23	-0.6
5,093,837	-		PFLU_RS22630	0.23	-1.4
5,093,837	-		PFLU_RS22630	0.23	-1.5
5,093,837	-		PFLU_RS22630	0.23	-1.1
5,093,915	-		PFLU_RS22630	0.26	-1.5
5,094,010	+		PFLU_RS22630	0.30	-2.1
5,094,010	+		PFLU_RS22630	0.30	+1.1
5,094,010	+		PFLU_RS22630	0.30	-2.3
5,094,010	+		PFLU_RS22630	0.30	-0.3
5,094,010	+		PFLU_RS22630	0.30	-1.4
5,094,010	+		PFLU_RS22630	0.30	+0.1
5,094,011	-		PFLU_RS22630	0.30	-2.3
5,094,011	-		PFLU_RS22630	0.30	+1.0
5,094,011	-		PFLU_RS22630	0.30	+0.1
5,094,011	-		PFLU_RS22630	0.30	-1.4
5,094,011	-		PFLU_RS22630	0.30	-1.2
5,094,011	-		PFLU_RS22630	0.30	-2.6
5,094,011	-		PFLU_RS22630	0.30	-1.0
5,094,011	-		PFLU_RS22630	0.30	-1.7
5,094,065	+		PFLU_RS22630	0.33	-1.3
5,094,086	-		PFLU_RS22630	0.34	-2.2
5,094,086	-		PFLU_RS22630	0.34	-1.4
5,094,086	-		PFLU_RS22630	0.34	-3.2
5,094,419	+		PFLU_RS22630	0.48	-2.1
5,094,419	+		PFLU_RS22630	0.48	+0.2
5,094,419	+		PFLU_RS22630	0.48	-2.9
5,094,420	-		PFLU_RS22630	0.48	-2.7
5,094,625	+		PFLU_RS22630	0.56	-0.4
5,094,626	-		PFLU_RS22630	0.56	-0.4
5,094,626	-		PFLU_RS22630	0.56	-2.5
5,094,626	-		PFLU_RS22630	0.56	-2.0
5,094,650	+		PFLU_RS22630	0.57	+0.1
5,094,650	+		PFLU_RS22630	0.57	-1.4
5,094,651	-		PFLU_RS22630	0.57	-1.8
5,094,651	-		PFLU_RS22630	0.57	-3.3
5,094,651	-		PFLU_RS22630	0.57	-2.5
5,094,688	+		PFLU_RS22630	0.59	-2.0
5,094,688	+		PFLU_RS22630	0.59	-3.3
5,094,688	+		PFLU_RS22630	0.59	+0.9
5,094,688	+		PFLU_RS22630	0.59	-0.0
5,094,688	+		PFLU_RS22630	0.59	-0.2
5,094,688	+		PFLU_RS22630	0.59	-3.0
5,094,688	+		PFLU_RS22630	0.59	-0.2
5,094,688	+		PFLU_RS22630	0.59	-2.6
5,094,689	-		PFLU_RS22630	0.59	-2.0
5,094,689	-		PFLU_RS22630	0.59	-3.3
5,094,689	-		PFLU_RS22630	0.59	-1.6
5,094,689	-		PFLU_RS22630	0.59	-1.1
5,094,689	-		PFLU_RS22630	0.59	+0.2
5,094,689	-		PFLU_RS22630	0.59	-3.5
5,094,689	-		PFLU_RS22630	0.59	-2.8
5,094,689	-		PFLU_RS22630	0.59	-0.8
5,094,742	+		PFLU_RS22630	0.61	-1.1
5,094,742	+		PFLU_RS22630	0.61	-2.7
5,094,742	+		PFLU_RS22630	0.61	-2.8
5,094,742	+		PFLU_RS22630	0.61	-2.7
5,094,742	+		PFLU_RS22630	0.61	-2.2
5,094,742	+		PFLU_RS22630	0.61	-1.2
5,094,742	+		PFLU_RS22630	0.61	-2.0
5,094,743	-		PFLU_RS22630	0.61	-2.4
5,094,743	-		PFLU_RS22630	0.61	-1.8
5,094,743	-		PFLU_RS22630	0.61	-2.2
5,094,743	-		PFLU_RS22630	0.61	-2.6
5,094,743	-		PFLU_RS22630	0.61	-0.9
5,094,743	-		PFLU_RS22630	0.61	-3.4
5,094,874	+		PFLU_RS22630	0.67	-2.2
5,094,874	+		PFLU_RS22630	0.67	-3.0
5,094,874	+		PFLU_RS22630	0.67	-3.0
5,094,874	+		PFLU_RS22630	0.67	+0.5
5,094,874	+		PFLU_RS22630	0.67	-0.5
5,094,874	+		PFLU_RS22630	0.67	+3.7
5,094,875	-		PFLU_RS22630	0.67	-2.4
5,094,875	-		PFLU_RS22630	0.67	-2.4
5,094,875	-		PFLU_RS22630	0.67	+1.0
5,094,875	-		PFLU_RS22630	0.67	-2.7
5,094,875	-		PFLU_RS22630	0.67	+0.8
5,094,875	-		PFLU_RS22630	0.67	+0.4
5,094,875	-		PFLU_RS22630	0.67	-1.2
5,094,875	-		PFLU_RS22630	0.67	-3.0
5,094,875	-		PFLU_RS22630	0.67	-4.0
5,094,875	-		PFLU_RS22630	0.67	-1.3
5,094,941	+		PFLU_RS22630	0.70	+0.2
5,094,941	+		PFLU_RS22630	0.70	-2.0
5,094,941	+		PFLU_RS22630	0.70	-1.6
5,094,942	-		PFLU_RS22630	0.70	+0.1
5,094,942	-		PFLU_RS22630	0.70	-3.1
5,094,942	-		PFLU_RS22630	0.70	-1.3
5,094,942	-		PFLU_RS22630	0.70	-1.0
5,094,942	-		PFLU_RS22630	0.70	-1.5
5,094,942	-		PFLU_RS22630	0.70	+0.1
5,094,942	-		PFLU_RS22630	0.70	-2.0
5,094,951	+		PFLU_RS22630	0.70	-2.4
5,094,951	+		PFLU_RS22630	0.70	-0.2
5,094,951	+		PFLU_RS22630	0.70	-2.0
5,094,951	+		PFLU_RS22630	0.70	-1.6
5,094,951	+		PFLU_RS22630	0.70	-0.6
5,094,952	-		PFLU_RS22630	0.70	-2.8
5,094,952	-		PFLU_RS22630	0.70	-2.4
5,094,952	-		PFLU_RS22630	0.70	-3.0
5,094,952	-		PFLU_RS22630	0.70	-0.3
5,094,952	-		PFLU_RS22630	0.70	-2.4
5,094,955	+		PFLU_RS22630	0.70	-2.2
5,094,955	+		PFLU_RS22630	0.70	-3.2
5,094,955	+		PFLU_RS22630	0.70	-1.4
5,094,955	+		PFLU_RS22630	0.70	-3.2
5,094,956	-		PFLU_RS22630	0.70	+0.1
5,094,956	-		PFLU_RS22630	0.70	-2.7
5,094,956	-		PFLU_RS22630	0.70	-2.0
5,094,956	-		PFLU_RS22630	0.70	-0.9
5,094,956	-		PFLU_RS22630	0.70	-1.6
5,094,984	+		PFLU_RS22630	0.71	-0.5
5,094,985	-		PFLU_RS22630	0.71	-0.2
5,095,104	+		PFLU_RS22630	0.76	-0.6
5,095,104	+		PFLU_RS22630	0.76	-3.7
5,095,105	-		PFLU_RS22630	0.76	-1.0
5,095,105	-		PFLU_RS22630	0.76	-1.1
5,095,130	+		PFLU_RS22630	0.77	-1.4
5,095,130	+		PFLU_RS22630	0.77	-3.1
5,095,130	+		PFLU_RS22630	0.77	-1.8
5,095,130	+		PFLU_RS22630	0.77	-1.9
5,095,131	-		PFLU_RS22630	0.78	-0.5
5,095,131	-		PFLU_RS22630	0.78	-1.7
5,095,131	-		PFLU_RS22630	0.78	-3.3
5,095,131	-		PFLU_RS22630	0.78	-0.2
5,095,131	-		PFLU_RS22630	0.78	-3.3
5,095,131	-		PFLU_RS22630	0.78	-1.7
5,095,551	+				+0.2
5,095,551	+				-0.4
5,095,571	+				-1.5
5,095,572	-				-2.6
5,095,617	+				-2.3
5,095,617	+				-0.6
5,095,617	+				-2.8
5,095,617	+				+0.8
5,095,617	+				-3.3
5,095,617	+				-1.1
5,095,617	+				-1.7
5,095,617	+				+1.0
5,095,617	+				-2.4
5,095,618	-				+1.1
5,095,618	-				-0.8
5,095,618	-				-2.4
5,095,618	-				+1.7
5,095,638	-				-0.7
5,095,650	+				-1.4
5,095,650	+				-0.3
5,095,650	+				-1.9
5,095,650	+				+0.2
5,095,650	+				-3.2
5,095,650	+				-1.2
5,095,650	+				-0.2
5,095,650	+				-1.4
5,095,650	+				-1.2
5,095,651	-				-1.1
5,095,651	-				-2.4
5,095,651	-				-2.6
5,095,651	-				-1.7
5,095,651	-				-0.9
5,095,651	-				-1.2
5,095,651	-				-2.3
5,095,651	-				-2.4
5,095,651	-				-1.7
5,095,654	+				-0.7
5,095,654	+				-0.5
5,095,654	+				-2.1
5,095,654	+				-1.7
5,095,654	+				+1.2
5,095,654	+				-1.0
5,095,654	+				-2.0
5,095,654	+				-1.8
5,095,654	+				+0.7
5,095,655	-				-2.7
5,095,655	-				-0.5
5,095,655	-				-2.1
5,095,655	-				-1.0
5,095,655	-				-2.3
5,095,655	-				-2.5
5,095,655	-				+1.6
5,095,655	-				-2.8
5,095,655	-				-1.4
5,095,655	-				+0.1
5,095,655	-				-0.0
5,095,659	+				+0.0
5,095,659	+				-2.0
5,095,660	-				-3.1
5,095,660	-				-1.8
5,095,660	-				-3.2
5,095,660	-				-0.3
5,095,718	-				+1.3
5,095,757	+				-2.4
5,095,799	+				-0.2
5,095,799	+				-0.2
5,095,799	+				-0.7
5,095,800	-				-3.1
5,095,800	-				+0.1
5,095,800	-				+3.8
5,095,800	-				+0.9
5,095,804	+				-3.4
5,095,805	-				+1.8
5,095,826	+				+0.1
5,095,864	-				+0.9
5,095,864	-				+0.5
5,095,864	-				-1.2
5,095,932	+		PFLU_RS22635	0.11	+0.6
5,095,932	+		PFLU_RS22635	0.11	-2.2
5,095,933	-		PFLU_RS22635	0.11	-0.5
5,095,957	+		PFLU_RS22635	0.14	-2.2
5,095,958	-		PFLU_RS22635	0.14	-3.2
5,095,958	-		PFLU_RS22635	0.14	+0.2
5,095,958	-		PFLU_RS22635	0.14	-0.2
5,095,975	-		PFLU_RS22635	0.16	+0.8
5,095,991	+		PFLU_RS22635	0.18	+2.5
5,095,991	+		PFLU_RS22635	0.18	+1.0
5,095,991	+		PFLU_RS22635	0.18	-2.1
5,095,991	+		PFLU_RS22635	0.18	+0.0
5,095,991	+		PFLU_RS22635	0.18	+1.2
5,095,991	+		PFLU_RS22635	0.18	-1.5
5,095,991	+		PFLU_RS22635	0.18	+1.0
5,095,991	+		PFLU_RS22635	0.18	-0.5
5,095,992	-		PFLU_RS22635	0.18	+0.2
5,095,992	-		PFLU_RS22635	0.18	-0.9
5,095,992	-		PFLU_RS22635	0.18	-0.4
5,095,992	-		PFLU_RS22635	0.18	-2.8
5,095,992	-		PFLU_RS22635	0.18	+0.8
5,095,992	-		PFLU_RS22635	0.18	+0.7
5,096,161	+		PFLU_RS22635	0.39	-0.5
5,096,161	+		PFLU_RS22635	0.39	-0.0
5,096,161	+		PFLU_RS22635	0.39	+0.2
5,096,161	+		PFLU_RS22635	0.39	+1.1
5,096,161	+		PFLU_RS22635	0.39	-1.2
5,096,162	-		PFLU_RS22635	0.39	+1.0
5,096,162	-		PFLU_RS22635	0.39	-1.5
5,096,193	+		PFLU_RS22635	0.43	-0.8
5,096,193	+		PFLU_RS22635	0.43	-2.6
5,096,193	+		PFLU_RS22635	0.43	-3.6
5,096,194	-		PFLU_RS22635	0.43	+0.8
5,096,203	+		PFLU_RS22635	0.44	+1.9
5,096,203	+		PFLU_RS22635	0.44	-0.8
5,096,203	+		PFLU_RS22635	0.44	-1.0
5,096,203	+		PFLU_RS22635	0.44	-2.0
5,096,203	+		PFLU_RS22635	0.44	+0.7
5,096,203	+		PFLU_RS22635	0.44	-1.9
5,096,203	+		PFLU_RS22635	0.44	-1.0
5,096,203	+		PFLU_RS22635	0.44	-1.1
5,096,203	+		PFLU_RS22635	0.44	-2.3
5,096,203	+		PFLU_RS22635	0.44	-1.2
5,096,203	+		PFLU_RS22635	0.44	+0.7
5,096,204	-		PFLU_RS22635	0.44	-0.0
5,096,204	-		PFLU_RS22635	0.44	-2.0
5,096,204	-		PFLU_RS22635	0.44	-1.9
5,096,204	-		PFLU_RS22635	0.44	-3.4
5,096,204	-		PFLU_RS22635	0.44	-3.1
5,096,204	-		PFLU_RS22635	0.44	+2.8
5,096,204	-		PFLU_RS22635	0.44	-1.4
5,096,204	-		PFLU_RS22635	0.44	-2.1
5,096,204	-		PFLU_RS22635	0.44	-0.0
5,096,204	-		PFLU_RS22635	0.44	-0.8
5,096,204	-		PFLU_RS22635	0.44	-1.7
5,096,204	-		PFLU_RS22635	0.44	-0.3
5,096,205	+		PFLU_RS22635	0.44	-2.0
5,096,205	+		PFLU_RS22635	0.44	-1.0
5,096,205	+		PFLU_RS22635	0.44	+0.0
5,096,205	+		PFLU_RS22635	0.44	-1.2
5,096,205	+		PFLU_RS22635	0.44	-1.4
5,096,205	+		PFLU_RS22635	0.44	+1.2
5,096,205	+		PFLU_RS22635	0.44	+1.1
5,096,206	-		PFLU_RS22635	0.44	-2.4
5,096,206	-		PFLU_RS22635	0.44	-1.8
5,096,206	-		PFLU_RS22635	0.44	-0.6
5,096,206	-		PFLU_RS22635	0.44	-0.2
5,096,215	-		PFLU_RS22635	0.45	+0.6
5,096,266	+		PFLU_RS22635	0.52	+0.2
5,096,266	+		PFLU_RS22635	0.52	-0.8
5,096,266	+		PFLU_RS22635	0.52	-1.3
5,096,267	-		PFLU_RS22635	0.52	+2.6
5,096,267	-		PFLU_RS22635	0.52	+1.2
5,096,267	-		PFLU_RS22635	0.52	-0.4
5,096,269	+		PFLU_RS22635	0.52	-0.5
5,096,269	+		PFLU_RS22635	0.52	-0.3
5,096,269	+		PFLU_RS22635	0.52	-1.2
5,096,269	+		PFLU_RS22635	0.52	-3.1
5,096,269	+		PFLU_RS22635	0.52	-0.2
5,096,269	+		PFLU_RS22635	0.52	+0.8
5,096,270	-		PFLU_RS22635	0.52	+0.2
5,096,270	-		PFLU_RS22635	0.52	-1.3
5,096,270	-		PFLU_RS22635	0.52	-2.4
5,096,270	-		PFLU_RS22635	0.52	-0.4
5,096,270	-		PFLU_RS22635	0.52	+1.9
5,096,330	+		PFLU_RS22635	0.59	-2.8
5,096,330	+		PFLU_RS22635	0.59	+0.2
5,096,330	+		PFLU_RS22635	0.59	-1.4
5,096,331	-		PFLU_RS22635	0.60	-2.6
5,096,331	-		PFLU_RS22635	0.60	+0.0
5,096,331	-		PFLU_RS22635	0.60	-0.5
5,096,332	+		PFLU_RS22635	0.60	-1.9
5,096,332	+		PFLU_RS22635	0.60	-2.0
5,096,332	+		PFLU_RS22635	0.60	-1.9
5,096,332	+		PFLU_RS22635	0.60	-0.1
5,096,332	+		PFLU_RS22635	0.60	+0.2
5,096,332	+		PFLU_RS22635	0.60	-3.6
5,096,332	+		PFLU_RS22635	0.60	-0.7
5,096,332	+		PFLU_RS22635	0.60	-1.5
5,096,332	+		PFLU_RS22635	0.60	-1.7
5,096,332	+		PFLU_RS22635	0.60	-1.6
5,096,332	+		PFLU_RS22635	0.60	-1.0
5,096,332	+		PFLU_RS22635	0.60	-2.1
5,096,332	+		PFLU_RS22635	0.60	-1.8
5,096,332	+		PFLU_RS22635	0.60	+0.6
5,096,332	+		PFLU_RS22635	0.60	-1.4
5,096,332	+		PFLU_RS22635	0.60	+0.4
5,096,332	+		PFLU_RS22635	0.60	-1.7
5,096,332	+		PFLU_RS22635	0.60	+2.0
5,096,332	+		PFLU_RS22635	0.60	-1.9
5,096,332	+		PFLU_RS22635	0.60	-2.4
5,096,332	+		PFLU_RS22635	0.60	-0.0
5,096,332	+		PFLU_RS22635	0.60	+1.9
5,096,333	-		PFLU_RS22635	0.60	-0.5
5,096,333	-		PFLU_RS22635	0.60	-2.5
5,096,333	-		PFLU_RS22635	0.60	-1.5
5,096,333	-		PFLU_RS22635	0.60	-2.1
5,096,333	-		PFLU_RS22635	0.60	-1.3
5,096,333	-		PFLU_RS22635	0.60	-2.0
5,096,333	-		PFLU_RS22635	0.60	+0.8
5,096,333	-		PFLU_RS22635	0.60	-0.8
5,096,333	-		PFLU_RS22635	0.60	+0.6
5,096,333	-		PFLU_RS22635	0.60	-0.0
5,096,333	-		PFLU_RS22635	0.60	-2.5
5,096,333	-		PFLU_RS22635	0.60	-1.5
5,096,333	-		PFLU_RS22635	0.60	-0.6
5,096,333	-		PFLU_RS22635	0.60	+1.6
5,096,333	-		PFLU_RS22635	0.60	+0.4
5,096,333	-		PFLU_RS22635	0.60	-1.8
5,096,333	-		PFLU_RS22635	0.60	-2.4
5,096,333	-		PFLU_RS22635	0.60	-0.2
5,096,333	-		PFLU_RS22635	0.60	-1.5
5,096,333	-		PFLU_RS22635	0.60	-0.9
5,096,369	-		PFLU_RS22635	0.64	-3.1
5,096,369	-		PFLU_RS22635	0.64	+1.0
5,096,515	+		PFLU_RS22635	0.82	-0.9
5,096,515	+		PFLU_RS22635	0.82	-1.7
5,096,571	+		PFLU_RS22635	0.89	-0.4
5,096,572	-		PFLU_RS22635	0.89	-1.4
5,096,659	+				-0.4
5,096,659	+				-1.7
5,096,660	-				-0.2
5,096,660	-				+2.0
5,096,660	-				+1.6
5,096,660	-				+0.3
5,096,660	-				-0.3