Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS22330

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
5,022,012	+		PFLU_RS22320	0.76	+4.5
5,022,012	+		PFLU_RS22320	0.76	-0.3
5,022,013	-		PFLU_RS22320	0.76	-0.5
5,022,013	-		PFLU_RS22320	0.76	+0.7
5,022,051	+		PFLU_RS22320	0.79	+0.8
5,022,051	+		PFLU_RS22320	0.79	+0.2
5,022,051	+		PFLU_RS22320	0.79	-3.0
5,022,051	+		PFLU_RS22320	0.79	-0.8
5,022,051	+		PFLU_RS22320	0.79	-1.5
5,022,051	+		PFLU_RS22320	0.79	-1.9
5,022,051	+		PFLU_RS22320	0.79	+0.9
5,022,051	+		PFLU_RS22320	0.79	-1.8
5,022,051	+		PFLU_RS22320	0.79	-3.3
5,022,052	-		PFLU_RS22320	0.79	+1.5
5,022,052	-		PFLU_RS22320	0.79	+0.5
5,022,052	-		PFLU_RS22320	0.79	-2.5
5,022,052	-		PFLU_RS22320	0.79	-0.9
5,022,052	-		PFLU_RS22320	0.79	-1.4
5,022,052	-		PFLU_RS22320	0.79	-0.2
5,022,052	-		PFLU_RS22320	0.79	-2.9
5,022,052	-		PFLU_RS22320	0.79	+2.3
5,022,108	+		PFLU_RS22320	0.83	+0.9
5,022,108	+		PFLU_RS22320	0.83	+0.2
5,022,108	+		PFLU_RS22320	0.83	-1.2
5,022,108	+		PFLU_RS22320	0.83	+2.5
5,022,109	-		PFLU_RS22320	0.83	-1.1
5,022,109	-		PFLU_RS22320	0.83	-1.0
5,022,109	-		PFLU_RS22320	0.83	+1.9
5,022,109	-		PFLU_RS22320	0.83	-0.1
5,022,109	-		PFLU_RS22320	0.83	+0.7
5,022,109	-		PFLU_RS22320	0.83	+1.6
5,022,186	+		PFLU_RS22320	0.88	-1.8
5,022,186	+		PFLU_RS22320	0.88	-1.7
5,022,187	-		PFLU_RS22320	0.88	-2.3
5,022,187	-		PFLU_RS22320	0.88	+1.3
5,022,187	-		PFLU_RS22320	0.88	-0.6
5,022,282	+				-0.5
5,022,282	+				+2.3
5,022,283	-				-1.8
5,022,283	-				-0.5
5,022,283	-				+0.2
5,022,283	-				+1.2
5,022,283	-				+0.3
5,022,333	-				-1.4
5,022,333	-				-1.0
5,022,503	-		PFLU_RS22325	0.23	-2.5
5,022,535	+		PFLU_RS22325	0.29	+2.6
5,022,535	+		PFLU_RS22325	0.29	+2.3
5,022,535	+		PFLU_RS22325	0.29	-1.2
5,022,535	+		PFLU_RS22325	0.29	+2.7
5,022,535	+		PFLU_RS22325	0.29	+3.4
5,022,535	+		PFLU_RS22325	0.29	-1.9
5,022,535	+		PFLU_RS22325	0.29	+1.8
5,022,536	-		PFLU_RS22325	0.29	-0.4
5,022,536	-		PFLU_RS22325	0.29	-0.8
5,022,536	-		PFLU_RS22325	0.29	+0.3
5,022,536	-		PFLU_RS22325	0.29	-0.5
5,022,536	-		PFLU_RS22325	0.29	+1.4
5,022,536	-		PFLU_RS22325	0.29	+0.5
5,022,536	-		PFLU_RS22325	0.29	+0.1
5,022,536	-		PFLU_RS22325	0.29	+2.3
5,022,536	-		PFLU_RS22325	0.29	-0.6
5,022,536	-		PFLU_RS22325	0.29	-2.2
5,022,536	-		PFLU_RS22325	0.29	-2.0
5,022,536	-		PFLU_RS22325	0.29	-1.0
5,022,536	-		PFLU_RS22325	0.29	+2.1
5,022,536	-		PFLU_RS22325	0.29	-1.2
5,022,536	-		PFLU_RS22325	0.29	-1.5
5,022,536	-		PFLU_RS22325	0.29	-1.5
5,022,536	-		PFLU_RS22325	0.29	-0.1
5,022,536	-		PFLU_RS22325	0.29	-1.2
5,022,536	-		PFLU_RS22325	0.29	+1.8
5,022,554	+		PFLU_RS22325	0.32	+1.5
5,022,554	+		PFLU_RS22325	0.32	-2.6
5,022,554	+		PFLU_RS22325	0.32	+1.7
5,022,555	-		PFLU_RS22325	0.32	-0.0
5,022,555	-		PFLU_RS22325	0.32	+0.4
5,022,555	-		PFLU_RS22325	0.32	+1.1
5,022,704	-		PFLU_RS22325	0.56	+0.9
5,022,733	+		PFLU_RS22325	0.61	-1.0
5,022,733	+		PFLU_RS22325	0.61	-2.1
5,022,733	+		PFLU_RS22325	0.61	+0.1
5,022,733	+		PFLU_RS22325	0.61	-3.0
5,022,733	+		PFLU_RS22325	0.61	-1.2
5,022,733	+		PFLU_RS22325	0.61	-0.9
5,022,733	+		PFLU_RS22325	0.61	-1.1
5,022,734	-		PFLU_RS22325	0.61	+1.3
5,022,734	-		PFLU_RS22325	0.61	+1.8
5,022,734	-		PFLU_RS22325	0.61	-1.2
5,022,734	-		PFLU_RS22325	0.61	-1.0
5,022,857	-		PFLU_RS22325	0.81	+2.9
5,022,929	-				+1.7
5,022,929	-				-1.2
5,023,038	+		PFLU_RS22330	0.32	-1.2
5,023,178	-				-0.1
5,023,178	-				-0.8
5,023,187	+				+0.4
5,023,187	+				-1.8
5,023,187	+				+3.5
5,023,187	+				+0.7
5,023,187	+				-0.5
5,023,187	+				+0.1
5,023,187	+				-0.8
5,023,188	-				+0.8
5,023,188	-				+1.3
5,023,201	+				-0.1
5,023,317	+		PFLU_RS22335	0.16	-0.2
5,023,318	-		PFLU_RS22335	0.16	+0.9
5,023,318	-		PFLU_RS22335	0.16	-2.3
5,023,779	+		PFLU_RS22335	0.64	-2.2
5,023,779	+		PFLU_RS22335	0.64	+0.5
5,023,779	+		PFLU_RS22335	0.64	+0.1
5,023,779	+		PFLU_RS22335	0.64	-1.9
5,023,779	+		PFLU_RS22335	0.64	-0.2
5,023,779	+		PFLU_RS22335	0.64	-1.4
5,023,779	+		PFLU_RS22335	0.64	+0.8
5,023,779	+		PFLU_RS22335	0.64	+2.6
5,023,779	+		PFLU_RS22335	0.64	-0.8
5,023,779	+		PFLU_RS22335	0.64	+0.2
5,023,780	-		PFLU_RS22335	0.64	-3.3
5,023,780	-		PFLU_RS22335	0.64	-1.1
5,023,780	-		PFLU_RS22335	0.64	+2.0
5,023,780	-		PFLU_RS22335	0.64	+0.3
5,023,780	-		PFLU_RS22335	0.64	-2.0
5,023,780	-		PFLU_RS22335	0.64	-2.6
5,023,780	-		PFLU_RS22335	0.64	+1.4
5,023,783	+		PFLU_RS22335	0.65	-2.0
5,023,783	+		PFLU_RS22335	0.65	+1.3
5,023,783	+		PFLU_RS22335	0.65	+0.6
5,023,783	+		PFLU_RS22335	0.65	+4.5
5,023,783	+		PFLU_RS22335	0.65	+0.2
5,023,783	+		PFLU_RS22335	0.65	-1.5
5,023,783	+		PFLU_RS22335	0.65	+1.8
5,023,783	+		PFLU_RS22335	0.65	-1.2
5,023,784	-		PFLU_RS22335	0.65	+2.0
5,023,784	-		PFLU_RS22335	0.65	+0.1
5,023,784	-		PFLU_RS22335	0.65	-1.9
5,023,784	-		PFLU_RS22335	0.65	-1.7
5,023,784	-		PFLU_RS22335	0.65	-1.9
5,023,784	-		PFLU_RS22335	0.65	-2.7
5,023,784	-		PFLU_RS22335	0.65	+0.1
5,023,784	-		PFLU_RS22335	0.65	-0.6
5,023,784	-		PFLU_RS22335	0.65	+1.5
5,023,784	-		PFLU_RS22335	0.65	-2.0
5,023,784	-		PFLU_RS22335	0.65	-0.2
5,023,784	-		PFLU_RS22335	0.65	+1.2
5,023,784	-		PFLU_RS22335	0.65	+0.2
5,023,784	-		PFLU_RS22335	0.65	-2.3
5,023,941	+		PFLU_RS22335	0.81	-0.1
5,023,941	+		PFLU_RS22335	0.81	-1.7
5,023,942	-		PFLU_RS22335	0.81	-1.0
5,023,942	-		PFLU_RS22335	0.81	-1.0
5,023,947	+		PFLU_RS22335	0.82	-2.7
5,023,947	+		PFLU_RS22335	0.82	+1.3
5,023,947	+		PFLU_RS22335	0.82	+1.7
5,023,948	-		PFLU_RS22335	0.82	+2.2
5,023,948	-		PFLU_RS22335	0.82	-1.5
5,023,948	-		PFLU_RS22335	0.82	-2.0
5,024,024	-				-1.2
5,024,024	-				-1.9
5,024,030	+				-1.9
5,024,059	-				+0.2
5,024,059	-				+1.1
5,024,059	-				+2.2
5,024,059	-				+1.5
5,024,064	+				+1.1
5,024,064	+				+1.9
5,024,064	+				+1.0
5,024,064	+				+0.5
5,024,065	-				+0.5
5,024,065	-				-1.4
5,024,065	-				+1.1
5,024,065	-				+0.5
5,024,065	-				-2.1
5,024,065	-				+1.1
5,024,066	+				+1.2
5,024,066	+				-0.8
5,024,066	+				+1.4
5,024,066	+				+2.8
5,024,066	+				-1.8
5,024,066	+				+0.5
5,024,066	+				-2.1
5,024,066	+				-1.0
5,024,066	+				+0.7
5,024,066	+				+0.7
5,024,066	+				-1.9
5,024,067	-				+2.4
5,024,067	-				-1.0
5,024,067	-				-1.9
5,024,067	-				+0.6
5,024,067	-				-2.2
5,024,067	-				+1.5
5,024,067	-				-2.4
5,024,067	-				+2.3
5,024,067	-				+0.6
5,024,067	-				+0.3
5,024,067	-				+1.8
5,024,067	-				-3.3
5,024,067	-				+1.6
5,024,067	-				+0.6
5,024,067	-				-0.4
5,024,067	-				+2.4
5,024,154	-				+0.3
5,024,154	-				+1.7
5,024,154	-				-1.9
5,024,154	-				-1.5