Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS20660

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
4,652,449	+		PFLU_RS20655	0.70	-0.9
4,652,449	+		PFLU_RS20655	0.70	+1.8
4,652,449	+		PFLU_RS20655	0.70	-2.2
4,652,450	-		PFLU_RS20655	0.70	+1.9
4,652,515	+		PFLU_RS20655	0.73	-0.6
4,652,515	+		PFLU_RS20655	0.73	+1.1
4,652,516	-		PFLU_RS20655	0.73	+1.0
4,652,516	-		PFLU_RS20655	0.73	+0.8
4,652,596	+		PFLU_RS20655	0.77	-1.2
4,652,596	+		PFLU_RS20655	0.77	-0.6
4,652,596	+		PFLU_RS20655	0.77	+0.9
4,652,596	+		PFLU_RS20655	0.77	+0.7
4,652,597	-		PFLU_RS20655	0.77	+1.8
4,652,597	-		PFLU_RS20655	0.77	+1.4
4,652,597	-		PFLU_RS20655	0.77	-2.3
4,652,597	-		PFLU_RS20655	0.77	+1.9
4,652,621	-		PFLU_RS20655	0.79	+1.9
4,652,621	-		PFLU_RS20655	0.79	+0.3
4,652,621	-		PFLU_RS20655	0.79	-0.4
4,652,738	+		PFLU_RS20655	0.84	+0.1
4,652,755	+		PFLU_RS20655	0.85	+0.6
4,652,755	+		PFLU_RS20655	0.85	-0.6
4,652,755	+		PFLU_RS20655	0.85	+0.1
4,652,755	+		PFLU_RS20655	0.85	+0.3
4,652,755	+		PFLU_RS20655	0.85	+1.2
4,652,755	+		PFLU_RS20655	0.85	-1.5
4,652,755	+		PFLU_RS20655	0.85	-0.7
4,652,755	+		PFLU_RS20655	0.85	+1.4
4,652,755	+		PFLU_RS20655	0.85	-1.2
4,652,755	+		PFLU_RS20655	0.85	-2.3
4,652,756	-		PFLU_RS20655	0.85	+2.3
4,652,756	-		PFLU_RS20655	0.85	+0.1
4,652,756	-		PFLU_RS20655	0.85	-0.2
4,652,756	-		PFLU_RS20655	0.85	+1.4
4,652,756	-		PFLU_RS20655	0.85	+1.8
4,652,770	+		PFLU_RS20655	0.86	+0.9
4,652,770	+		PFLU_RS20655	0.86	+1.2
4,652,770	+		PFLU_RS20655	0.86	-1.8
4,652,770	+		PFLU_RS20655	0.86	-1.1
4,652,773	+		PFLU_RS20655	0.86	-0.9
4,652,773	+		PFLU_RS20655	0.86	+1.2
4,652,773	+		PFLU_RS20655	0.86	+1.4
4,652,774	-		PFLU_RS20655	0.86	+0.3
4,652,774	-		PFLU_RS20655	0.86	-0.1
4,652,774	-		PFLU_RS20655	0.86	+0.9
4,652,774	-		PFLU_RS20655	0.86	-1.4
4,652,774	-		PFLU_RS20655	0.86	+0.7
4,652,774	-		PFLU_RS20655	0.86	-1.5
4,652,779	+		PFLU_RS20655	0.86	-0.7
4,652,779	+		PFLU_RS20655	0.86	+0.1
4,652,780	-		PFLU_RS20655	0.86	+1.2
4,652,780	-		PFLU_RS20655	0.86	-0.5
4,652,782	+		PFLU_RS20655	0.87	-0.0
4,652,782	+		PFLU_RS20655	0.87	+2.2
4,652,783	-		PFLU_RS20655	0.87	+0.1
4,652,783	-		PFLU_RS20655	0.87	+1.2
4,652,783	-		PFLU_RS20655	0.87	+0.9
4,652,783	-		PFLU_RS20655	0.87	+1.2
4,652,783	-		PFLU_RS20655	0.87	+0.4
4,652,794	+		PFLU_RS20655	0.87	+2.4
4,652,837	-		PFLU_RS20655	0.89	-1.5
4,653,053	+				-0.8
4,653,053	+				-0.4
4,653,053	+				-0.4
4,653,053	+				-1.8
4,653,053	+				+1.1
4,653,053	+				-0.9
4,653,053	+				+1.0
4,653,053	+				+4.5
4,653,053	+				+0.4
4,653,053	+				-2.4
4,653,053	+				-3.1
4,653,053	+				+2.2
4,653,053	+				-1.4
4,653,053	+				+1.0
4,653,053	+				+0.6
4,653,053	+				+4.6
4,653,053	+				-4.0
4,653,054	-				-0.7
4,653,054	-				+0.7
4,653,054	-				+0.3
4,653,054	-				+1.4
4,653,054	-				+1.2
4,653,054	-				-1.1
4,653,054	-				-1.4
4,653,054	-				+1.3
4,653,054	-				-3.1
4,653,054	-				-0.8
4,653,058	+				-1.5
4,653,058	+				-0.2
4,653,058	+				-1.9
4,653,059	-				+0.3
4,653,059	-				-1.6
4,653,059	-				-1.4
4,653,059	-				-1.0
4,653,059	-				+1.5
4,653,059	-				-1.4
4,653,059	-				-0.9
4,653,059	-				-1.2
4,653,067	+				-3.3
4,653,067	+				+0.8
4,653,067	+				+2.1
4,653,068	-				-1.0
4,653,068	-				-1.9
4,653,068	-				-1.5
4,653,068	-				-0.1
4,653,068	-				+0.4
4,653,068	-				-2.1
4,653,068	-				-0.7
4,653,083	+				-1.1
4,653,083	+				-2.9
4,653,084	-				-1.8
4,653,103	+				-1.7
4,653,103	+				+1.1
4,653,104	-				-1.6
4,653,104	-				+0.8
4,653,104	-				+1.1
4,653,104	-				+0.1
4,653,154	-				+0.2
4,653,159	+				+1.3
4,653,159	+				-0.3
4,653,159	+				+1.5
4,653,160	-				-1.2
4,653,160	-				+1.1
4,653,229	+				+0.7
4,653,229	+				+0.2
4,653,229	+				+0.6
4,653,229	+				+0.3
4,653,229	+				-0.7
4,653,229	+				-1.6
4,653,230	-				-0.3
4,653,230	-				-2.6
4,653,230	-				+1.4
4,653,236	-				+3.5
4,653,249	+				-2.2
4,653,309	+				+0.1
4,653,309	+				+0.5
4,653,309	+				+1.5
4,653,310	-				+0.7
4,653,310	-				+0.9
4,653,310	-				+0.3
4,653,310	-				+2.3
4,653,311	+				-1.5
4,653,311	+				-0.7
4,653,311	+				-1.4
4,653,311	+				+0.1
4,653,311	+				+2.1
4,653,311	+				-0.9
4,653,312	-				+0.6
4,653,312	-				-1.5
4,653,312	-				-1.2
4,653,312	-				+0.8
4,653,312	-				+0.1
4,653,314	+				-0.0
4,653,314	+				+0.9
4,653,314	+				-1.5
4,653,314	+				+1.3
4,653,314	+				-0.1
4,653,314	+				-0.7
4,653,314	+				-1.4
4,653,314	+				-0.4
4,653,314	+				+0.2
4,653,314	+				+0.1
4,653,314	+				+0.0
4,653,314	+				+1.9
4,653,314	+				-1.8
4,653,314	+				-2.5
4,653,314	+				-0.1
4,653,314	+				+1.1
4,653,314	+				+1.0
4,653,314	+				-0.4
4,653,314	+				+0.9
4,653,314	+				+0.1
4,653,314	+				-0.5
4,653,314	+				+0.2
4,653,314	+				+3.3
4,653,315	-				-2.8
4,653,315	-				-0.9
4,653,315	-				-0.9
4,653,315	-				-0.7
4,653,315	-				-2.8
4,653,315	-				+0.1
4,653,315	-				-2.5
4,653,315	-				+1.2
4,653,315	-				+0.1
4,653,315	-				-2.1
4,653,315	-				+1.4
4,653,315	-				+1.5
4,653,315	-				+0.9
4,653,315	-				+0.4
4,653,315	-				+0.2
4,653,315	-				-2.2
4,653,315	-				+0.6
4,653,315	-				+1.3
4,653,315	-				+0.1
4,653,315	-				+1.7
4,653,338	+				+0.0
4,653,339	-				-1.6
4,653,339	-				-3.2
4,653,381	+				+0.8
4,653,382	-				+0.7
4,653,438	+				-0.5
4,653,438	+				+0.4
4,653,438	+				-1.8
4,653,439	-				-0.6
4,653,508	+				-1.2
4,653,508	+				-1.9
4,653,509	-				+1.1
4,653,595	+		PFLU_RS20660	0.17	+0.6
4,653,595	+		PFLU_RS20660	0.17	-0.0
4,653,595	+		PFLU_RS20660	0.17	-1.7
4,653,622	+		PFLU_RS20660	0.19	-0.5
4,653,622	+		PFLU_RS20660	0.19	-1.4
4,653,695	+		PFLU_RS20660	0.25	-3.2
4,653,695	+		PFLU_RS20660	0.25	-1.2
4,653,695	+		PFLU_RS20660	0.25	-2.6
4,653,695	+		PFLU_RS20660	0.25	-1.5
4,653,695	+		PFLU_RS20660	0.25	-2.2
4,653,695	+		PFLU_RS20660	0.25	-1.5
4,653,695	+		PFLU_RS20660	0.25	-1.1
4,653,695	+		PFLU_RS20660	0.25	-0.9
4,653,696	-		PFLU_RS20660	0.25	+0.3
4,653,696	-		PFLU_RS20660	0.25	-1.0
4,653,696	-		PFLU_RS20660	0.25	-0.4
4,653,696	-		PFLU_RS20660	0.25	-1.6
4,653,696	-		PFLU_RS20660	0.25	-1.7
4,653,696	-		PFLU_RS20660	0.25	-2.0
4,653,841	+		PFLU_RS20660	0.37	-3.8
4,653,850	+		PFLU_RS20660	0.38	-0.9
4,653,850	+		PFLU_RS20660	0.38	-1.4
4,653,851	-		PFLU_RS20660	0.38	-1.3
4,653,851	-		PFLU_RS20660	0.38	-2.1
4,653,851	-		PFLU_RS20660	0.38	-1.4
4,653,851	-		PFLU_RS20660	0.38	-0.6
4,653,851	-		PFLU_RS20660	0.38	-3.5
4,653,851	-		PFLU_RS20660	0.38	+0.3
4,653,851	-		PFLU_RS20660	0.38	-3.1
4,654,249	+		PFLU_RS20660	0.71	-1.9
4,654,249	+		PFLU_RS20660	0.71	+2.0
4,654,250	-		PFLU_RS20660	0.71	+1.6
4,654,250	-		PFLU_RS20660	0.71	+1.2
4,654,250	-		PFLU_RS20660	0.71	-3.2
4,654,450	+		PFLU_RS20660	0.88	-1.9
4,654,450	+		PFLU_RS20660	0.88	-0.7
4,654,451	-		PFLU_RS20660	0.88	-0.7
4,654,451	-		PFLU_RS20660	0.88	-1.7
4,654,451	-		PFLU_RS20660	0.88	+1.4
4,654,504	+				-0.9
4,654,504	+				-2.8
4,654,504	+				-1.2
4,654,504	+				-0.5
4,654,504	+				-1.1
4,654,504	+				-0.9
4,654,504	+				-1.7
4,654,504	+				-0.4
4,654,504	+				-1.7
4,654,504	+				-1.2
4,654,504	+				+0.6
4,654,504	+				-1.1
4,654,504	+				-1.8
4,654,504	+				-2.1
4,654,505	-				-0.7
4,654,505	-				-3.0
4,654,505	-				+1.1
4,654,505	-				-3.5
4,654,505	-				-0.9
4,654,524	+				-1.5
4,654,524	+				-2.0
4,654,524	+				-0.1
4,654,525	-				-2.1
4,654,525	-				-1.9
4,654,525	-				-0.4
4,654,591	+				-0.5
4,654,591	+				+0.4
4,654,591	+				+0.1
4,654,591	+				-0.6
4,654,592	-				+0.1
4,654,592	-				-0.6
4,654,592	-				+1.2
4,654,592	-				+0.1
4,654,592	-				+1.5
4,654,592	-				-1.6
4,654,592	-				-0.7
4,654,592	-				+2.3
4,654,592	-				+0.6
4,654,862	-				+1.2
4,655,110	+				+1.2
4,655,111	-				-2.4
4,655,111	-				+0.5
4,655,111	-				+2.1
4,655,122	+				+0.9
4,655,122	+				-2.1
4,655,122	+				-2.5
4,655,122	+				+1.5
4,655,122	+				-0.4
4,655,122	+				+1.5
4,655,122	+				+0.4
4,655,123	-				-0.6
4,655,123	-				+0.2
4,655,123	-				+1.0
4,655,123	-				+0.9
4,655,123	-				-1.9
4,655,128	+				-0.4
4,655,128	+				+0.6
4,655,128	+				+1.0
4,655,128	+				-1.3
4,655,128	+				+1.9
4,655,128	+				+2.3
4,655,128	+				+2.8
4,655,128	+				-1.5
4,655,129	-				+0.1
4,655,129	-				-3.2
4,655,129	-				+1.8
4,655,216	+		PFLU_RS20670	0.10	+1.2
4,655,216	+		PFLU_RS20670	0.10	-2.1
4,655,216	+		PFLU_RS20670	0.10	+1.1
4,655,216	+		PFLU_RS20670	0.10	+0.9
4,655,217	-		PFLU_RS20670	0.10	+0.3
4,655,264	+		PFLU_RS20670	0.16	-0.9
4,655,347	+		PFLU_RS20670	0.25	-1.2
4,655,347	+		PFLU_RS20670	0.25	+1.2
4,655,347	+		PFLU_RS20670	0.25	-1.8
4,655,443	+		PFLU_RS20670	0.36	-1.5
4,655,443	+		PFLU_RS20670	0.36	+0.1
4,655,443	+		PFLU_RS20670	0.36	+0.4
4,655,443	+		PFLU_RS20670	0.36	-1.5
4,655,443	+		PFLU_RS20670	0.36	+2.6
4,655,443	+		PFLU_RS20670	0.36	-2.7
4,655,443	+		PFLU_RS20670	0.36	+1.5
4,655,443	+		PFLU_RS20670	0.36	+1.4
4,655,443	+		PFLU_RS20670	0.36	+2.1
4,655,444	-		PFLU_RS20670	0.36	+0.5
4,655,444	-		PFLU_RS20670	0.36	-0.5
4,655,444	-		PFLU_RS20670	0.36	-0.6
4,655,444	-		PFLU_RS20670	0.36	+0.7
4,655,444	-		PFLU_RS20670	0.36	-0.1
4,655,444	-		PFLU_RS20670	0.36	-0.4
4,655,444	-		PFLU_RS20670	0.36	+0.5