Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS19290

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
4,361,171	+				+0.4
4,361,172	-				+1.1
4,361,419	-		PFLU_RS19285	0.34	+1.2
4,361,440	+		PFLU_RS19285	0.37	+0.7
4,361,440	+		PFLU_RS19285	0.37	+0.4
4,361,440	+		PFLU_RS19285	0.37	-1.7
4,361,440	+		PFLU_RS19285	0.37	-0.7
4,361,441	-		PFLU_RS19285	0.37	-2.2
4,361,509	+		PFLU_RS19285	0.45	-2.3
4,361,509	+		PFLU_RS19285	0.45	+0.7
4,361,509	+		PFLU_RS19285	0.45	-1.4
4,361,509	+		PFLU_RS19285	0.45	+0.9
4,361,509	+		PFLU_RS19285	0.45	+3.0
4,361,509	+		PFLU_RS19285	0.45	-0.8
4,361,509	+		PFLU_RS19285	0.45	+1.4
4,361,509	+		PFLU_RS19285	0.45	-2.2
4,361,510	-		PFLU_RS19285	0.46	+1.0
4,361,510	-		PFLU_RS19285	0.46	+2.3
4,361,511	+		PFLU_RS19285	0.46	-0.2
4,361,511	+		PFLU_RS19285	0.46	-0.1
4,361,512	-		PFLU_RS19285	0.46	-2.2
4,361,560	+		PFLU_RS19285	0.52	+0.6
4,361,560	+		PFLU_RS19285	0.52	-0.3
4,361,560	+		PFLU_RS19285	0.52	+1.7
4,361,560	+		PFLU_RS19285	0.52	+2.1
4,361,561	-		PFLU_RS19285	0.52	-0.8
4,361,561	-		PFLU_RS19285	0.52	+0.9
4,361,561	-		PFLU_RS19285	0.52	+1.3
4,361,561	-		PFLU_RS19285	0.52	+0.8
4,361,564	-		PFLU_RS19285	0.52	+0.5
4,361,605	+		PFLU_RS19285	0.57	+1.2
4,361,605	+		PFLU_RS19285	0.57	-0.7
4,361,605	+		PFLU_RS19285	0.57	+2.1
4,361,606	-		PFLU_RS19285	0.57	-2.9
4,361,768	-		PFLU_RS19285	0.77	+1.3
4,362,064	+				-0.1
4,362,076	-		PFLU_RS19290	0.10	+1.3
4,362,379	+		PFLU_RS19290	0.45	-1.3
4,362,379	+		PFLU_RS19290	0.45	-0.5
4,362,386	-		PFLU_RS19290	0.46	+2.0
4,362,472	+		PFLU_RS19290	0.55	+0.3
4,362,472	+		PFLU_RS19290	0.55	-0.2
4,362,472	+		PFLU_RS19290	0.55	+2.7
4,362,472	+		PFLU_RS19290	0.55	+1.0
4,362,472	+		PFLU_RS19290	0.55	-0.3
4,362,472	+		PFLU_RS19290	0.55	-1.8
4,362,472	+		PFLU_RS19290	0.55	+0.3
4,362,472	+		PFLU_RS19290	0.55	-0.4
4,362,472	+		PFLU_RS19290	0.55	-0.8
4,362,473	-		PFLU_RS19290	0.56	-0.8
4,362,473	-		PFLU_RS19290	0.56	+1.5
4,362,473	-		PFLU_RS19290	0.56	-0.1
4,362,473	-		PFLU_RS19290	0.56	+2.1
4,362,473	-		PFLU_RS19290	0.56	-0.2
4,362,573	+		PFLU_RS19290	0.67	+0.2
4,362,573	+		PFLU_RS19290	0.67	-1.9
4,362,573	+		PFLU_RS19290	0.67	+2.5
4,362,573	+		PFLU_RS19290	0.67	-0.5
4,362,573	+		PFLU_RS19290	0.67	-2.0
4,362,574	-		PFLU_RS19290	0.67	+1.2
4,362,574	-		PFLU_RS19290	0.67	-0.4
4,362,574	-		PFLU_RS19290	0.67	-0.9
4,362,574	-		PFLU_RS19290	0.67	+0.0
4,362,574	-		PFLU_RS19290	0.67	+1.6
4,362,574	-		PFLU_RS19290	0.67	-0.2
4,362,574	-		PFLU_RS19290	0.67	-0.0
4,362,574	-		PFLU_RS19290	0.67	+0.3
4,362,574	-		PFLU_RS19290	0.67	-0.5
4,362,574	-		PFLU_RS19290	0.67	+1.3
4,362,574	-		PFLU_RS19290	0.67	+1.5
4,362,623	-		PFLU_RS19290	0.73	+0.5
4,362,754	+		PFLU_RS19290	0.88	+0.4
4,362,754	+		PFLU_RS19290	0.88	+1.1
4,362,754	+		PFLU_RS19290	0.88	+0.5
4,362,754	+		PFLU_RS19290	0.88	-1.1
4,362,754	+		PFLU_RS19290	0.88	+0.3
4,362,754	+		PFLU_RS19290	0.88	+2.5
4,362,755	-		PFLU_RS19290	0.88	+1.2
4,362,755	-		PFLU_RS19290	0.88	+0.8
4,362,755	-		PFLU_RS19290	0.88	-1.1
4,362,755	-		PFLU_RS19290	0.88	+0.3
4,362,859	+				+1.1
4,362,860	-				-2.0
4,362,860	-				+1.6
4,362,882	+				-1.5
4,362,882	+				+0.5
4,362,882	+				+1.1
4,362,882	+				+0.3
4,362,882	+				-2.0
4,362,882	+				+1.0
4,362,882	+				-1.5
4,362,882	+				-1.3
4,362,882	+				+1.9
4,362,883	-				+0.6
4,362,883	-				+1.7
4,362,883	-				-2.4
4,362,883	-				+0.7
4,362,883	-				+1.6
4,362,883	-				+0.2
4,362,883	-				+0.4
4,362,891	-				+2.7
4,363,087	+		PFLU_RS19295	0.18	-2.5
4,363,088	-		PFLU_RS19295	0.18	-0.6
4,363,088	-		PFLU_RS19295	0.18	-1.7
4,363,088	-		PFLU_RS19295	0.18	+2.0
4,363,088	-		PFLU_RS19295	0.18	+0.5
4,363,245	+		PFLU_RS19295	0.34	-3.5
4,363,245	+		PFLU_RS19295	0.34	+0.2
4,363,357	+		PFLU_RS19295	0.46	+0.1
4,363,358	-		PFLU_RS19295	0.46	+1.2
4,363,358	-		PFLU_RS19295	0.46	+1.1
4,363,443	+		PFLU_RS19295	0.55	-2.9
4,363,444	-		PFLU_RS19295	0.55	+1.0
4,363,576	+		PFLU_RS19295	0.69	+0.2
4,363,576	+		PFLU_RS19295	0.69	+0.6
4,363,577	-		PFLU_RS19295	0.69	+0.9
4,363,577	-		PFLU_RS19295	0.69	+1.1
4,363,577	-		PFLU_RS19295	0.69	+2.3
4,363,577	-		PFLU_RS19295	0.69	-1.1
4,363,577	-		PFLU_RS19295	0.69	-0.5
4,363,579	+		PFLU_RS19295	0.69	+0.2
4,363,579	+		PFLU_RS19295	0.69	-0.6
4,363,579	+		PFLU_RS19295	0.69	+1.1
4,363,579	+		PFLU_RS19295	0.69	+0.0
4,363,579	+		PFLU_RS19295	0.69	+1.4
4,363,580	-		PFLU_RS19295	0.69	-0.2
4,363,580	-		PFLU_RS19295	0.69	-0.3
4,363,580	-		PFLU_RS19295	0.69	-1.5
4,363,580	-		PFLU_RS19295	0.69	-0.2
4,363,580	-		PFLU_RS19295	0.69	-3.0
4,363,580	-		PFLU_RS19295	0.69	-1.5
4,363,580	-		PFLU_RS19295	0.69	+2.0
4,363,795	+				+0.2
4,363,795	+				+1.2
4,363,795	+				-0.6
4,363,796	-				-0.3
4,363,796	-				-0.1
4,363,796	-				-1.3
4,363,796	-				+1.4
4,363,815	-				-0.7
4,363,821	+				+1.2
4,363,821	+				-2.3
4,363,821	+				-0.1
4,363,822	-				+1.8
4,363,822	-				-1.4
4,363,822	-				+0.6
4,363,822	-				+0.7
4,363,826	-				-0.2
4,363,826	-				+1.3
4,363,857	+				+1.6
4,363,858	-				+0.0