Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS17710

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
4,019,472	+		PFLU_RS17700	0.73	-0.6
4,019,472	+		PFLU_RS17700	0.73	+1.3
4,019,472	+		PFLU_RS17700	0.73	+0.9
4,019,472	+		PFLU_RS17700	0.73	+0.5
4,019,473	-		PFLU_RS17700	0.73	-1.6
4,019,475	-		PFLU_RS17700	0.73	+0.4
4,019,503	-		PFLU_RS17700	0.80	-0.6
4,019,503	-		PFLU_RS17700	0.80	-0.2
4,019,577	-				+1.7
4,019,743	+				+1.2
4,019,743	+				-0.7
4,019,791	-				+0.3
4,019,791	-				-1.1
4,019,944	+		PFLU_RS17705	0.33	-1.2
4,019,945	-		PFLU_RS17705	0.33	-0.8
4,020,169	+		PFLU_RS17705	0.77	-2.1
4,020,170	-		PFLU_RS17705	0.77	-0.1
4,020,220	+		PFLU_RS17705	0.87	-0.7
4,020,220	+		PFLU_RS17705	0.87	-1.7
4,020,220	+		PFLU_RS17705	0.87	-1.3
4,020,220	+		PFLU_RS17705	0.87	-2.9
4,020,220	+		PFLU_RS17705	0.87	+1.3
4,020,221	-		PFLU_RS17705	0.87	-0.8
4,020,221	-		PFLU_RS17705	0.87	-0.0
4,020,221	-		PFLU_RS17705	0.87	-2.1
4,020,221	-		PFLU_RS17705	0.87	+0.3
4,020,221	-		PFLU_RS17705	0.87	-0.6
4,020,221	-		PFLU_RS17705	0.87	+0.5
4,020,221	-		PFLU_RS17705	0.87	+1.0
4,020,339	+				-2.4
4,020,339	+				-1.9
4,020,339	+				+2.0
4,020,339	+				-1.5
4,020,339	+				-0.3
4,020,340	-				+0.4
4,020,340	-				+0.1
4,020,340	-				-0.4
4,020,340	-				+1.1
4,020,340	-				-0.5
4,020,340	-				-1.1
4,020,340	-				-2.7
4,020,340	-				+0.0
4,020,340	-				-1.8
4,020,432	+		PFLU_RS17710	0.15	-2.1
4,020,433	-		PFLU_RS17710	0.16	+1.0
4,020,433	-		PFLU_RS17710	0.16	+0.1
4,020,433	-		PFLU_RS17710	0.16	-1.2
4,020,433	-		PFLU_RS17710	0.16	+1.5
4,020,433	-		PFLU_RS17710	0.16	+0.3
4,020,433	-		PFLU_RS17710	0.16	+0.8
4,020,436	+		PFLU_RS17710	0.16	-1.1
4,020,436	+		PFLU_RS17710	0.16	-3.9
4,020,436	+		PFLU_RS17710	0.16	+0.1
4,020,436	+		PFLU_RS17710	0.16	-0.3
4,020,436	+		PFLU_RS17710	0.16	+0.9
4,020,436	+		PFLU_RS17710	0.16	-0.7
4,020,437	-		PFLU_RS17710	0.16	+0.6
4,020,437	-		PFLU_RS17710	0.16	-1.9
4,020,437	-		PFLU_RS17710	0.16	-0.4
4,020,437	-		PFLU_RS17710	0.16	-0.4
4,020,437	-		PFLU_RS17710	0.16	-1.9
4,020,437	-		PFLU_RS17710	0.16	+0.6
4,020,437	-		PFLU_RS17710	0.16	+1.9
4,020,437	-		PFLU_RS17710	0.16	-0.4
4,020,437	-		PFLU_RS17710	0.16	-0.9
4,020,437	-		PFLU_RS17710	0.16	+1.2
4,020,651	-		PFLU_RS17710	0.38	-0.5
4,020,946	+		PFLU_RS17710	0.70	+0.7
4,020,946	+		PFLU_RS17710	0.70	+1.4
4,020,946	+		PFLU_RS17710	0.70	-0.9
4,020,946	+		PFLU_RS17710	0.70	+0.7
4,020,946	+		PFLU_RS17710	0.70	-0.5
4,020,946	+		PFLU_RS17710	0.70	+0.4
4,020,946	+		PFLU_RS17710	0.70	+3.6
4,020,946	+		PFLU_RS17710	0.70	-0.0
4,020,947	-		PFLU_RS17710	0.70	+0.6
4,020,947	-		PFLU_RS17710	0.70	-0.2
4,020,947	-		PFLU_RS17710	0.70	+0.5
4,020,947	-		PFLU_RS17710	0.70	-1.1
4,021,264	+				-0.1
4,021,264	+				-0.4
4,021,264	+				-0.7
4,021,264	+				+2.0
4,021,265	-				+0.3
4,021,265	-				-2.5
4,021,534	-				-0.0
4,021,576	+				+0.3
4,021,576	+				+0.6
4,021,576	+				+1.4
4,021,577	-				-2.1
4,021,577	-				-1.7
4,021,577	-				+0.3
4,021,647	+		PFLU_RS17715	0.13	+1.0
4,021,647	+		PFLU_RS17715	0.13	+0.4
4,021,647	+		PFLU_RS17715	0.13	-0.3
4,021,647	+		PFLU_RS17715	0.13	-0.5
4,021,647	+		PFLU_RS17715	0.13	-1.5
4,021,647	+		PFLU_RS17715	0.13	+1.4
4,021,648	-		PFLU_RS17715	0.13	-1.3
4,021,648	-		PFLU_RS17715	0.13	-0.3
4,021,648	-		PFLU_RS17715	0.13	+2.5
4,021,648	-		PFLU_RS17715	0.13	-1.9
4,021,651	+		PFLU_RS17715	0.13	-1.3
4,021,651	+		PFLU_RS17715	0.13	-0.7
4,021,651	+		PFLU_RS17715	0.13	+0.7
4,021,651	+		PFLU_RS17715	0.13	+1.0
4,021,651	+		PFLU_RS17715	0.13	+1.0
4,021,651	+		PFLU_RS17715	0.13	-0.4
4,021,651	+		PFLU_RS17715	0.13	+2.6
4,021,651	+		PFLU_RS17715	0.13	-2.5
4,021,651	+		PFLU_RS17715	0.13	+0.7
4,021,651	+		PFLU_RS17715	0.13	-0.7
4,021,651	+		PFLU_RS17715	0.13	+1.0
4,021,651	+		PFLU_RS17715	0.13	+1.6
4,021,652	-		PFLU_RS17715	0.13	-0.4
4,021,652	-		PFLU_RS17715	0.13	+0.4
4,021,652	-		PFLU_RS17715	0.13	+0.1
4,021,652	-		PFLU_RS17715	0.13	+0.1
4,021,652	-		PFLU_RS17715	0.13	+1.9
4,021,652	-		PFLU_RS17715	0.13	-0.4
4,021,652	-		PFLU_RS17715	0.13	+1.3
4,021,754	-		PFLU_RS17715	0.17	+0.6
4,021,912	+		PFLU_RS17715	0.24	-2.6
4,021,913	-		PFLU_RS17715	0.24	-0.1
4,021,969	+		PFLU_RS17715	0.26	-1.8
4,021,986	+		PFLU_RS17715	0.27	+0.9
4,021,986	+		PFLU_RS17715	0.27	-0.9
4,021,986	+		PFLU_RS17715	0.27	-1.1
4,021,986	+		PFLU_RS17715	0.27	+0.0
4,021,987	-		PFLU_RS17715	0.27	+1.1
4,021,987	-		PFLU_RS17715	0.27	-0.7
4,021,987	-		PFLU_RS17715	0.27	+0.8
4,021,987	-		PFLU_RS17715	0.27	-3.3
4,021,990	+		PFLU_RS17715	0.27	+2.2
4,021,991	-		PFLU_RS17715	0.27	+0.7
4,021,991	-		PFLU_RS17715	0.27	+0.7
4,021,991	-		PFLU_RS17715	0.27	-2.1
4,021,991	-		PFLU_RS17715	0.27	+0.0
4,022,002	+		PFLU_RS17715	0.27	-2.1
4,022,002	+		PFLU_RS17715	0.27	+0.9
4,022,002	+		PFLU_RS17715	0.27	-1.1
4,022,009	-		PFLU_RS17715	0.27	-1.0
4,022,038	+		PFLU_RS17715	0.29	-0.1
4,022,038	+		PFLU_RS17715	0.29	+3.5
4,022,039	-		PFLU_RS17715	0.29	-0.4
4,022,039	-		PFLU_RS17715	0.29	+1.0
4,022,039	-		PFLU_RS17715	0.29	+0.3
4,022,039	-		PFLU_RS17715	0.29	-0.1
4,022,231	+		PFLU_RS17715	0.36	-1.4
4,022,231	+		PFLU_RS17715	0.36	-0.7
4,022,232	-		PFLU_RS17715	0.37	+1.3
4,022,232	-		PFLU_RS17715	0.37	+0.1
4,022,232	-		PFLU_RS17715	0.37	+0.7
4,022,232	-		PFLU_RS17715	0.37	+0.9