Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS14550

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
3,251,549	+		PFLU_RS14535	0.81	-2.2
3,251,549	+		PFLU_RS14535	0.81	+0.9
3,251,589	+				-3.0
3,251,589	+				+0.2
3,251,590	-				-1.3
3,251,590	-				+2.2
3,251,590	-				+1.3
3,251,602	+				+3.6
3,251,602	+				-0.3
3,251,602	+				-1.6
3,251,602	+				+0.6
3,251,602	+				+1.3
3,251,602	+				+1.3
3,251,602	+				+0.5
3,251,602	+				+2.3
3,251,602	+				-1.7
3,251,603	-				+0.5
3,251,603	-				+0.7
3,251,603	-				+0.9
3,251,603	-				+2.6
3,251,603	-				-1.4
3,251,746	+		PFLU_RS14540	0.51	+0.7
3,251,882	+				-0.6
3,251,882	+				-1.3
3,251,882	+				-2.7
3,251,882	+				-0.4
3,251,883	-				+1.1
3,251,883	-				-2.3
3,251,883	-				+0.3
3,251,883	-				-1.7
3,251,883	-				+1.7
3,251,884	+				-2.9
3,251,884	+				-3.4
3,251,884	+				-0.6
3,251,884	+				-0.4
3,251,884	+				-1.4
3,251,884	+				+0.5
3,251,884	+				-0.2
3,251,884	+				-1.9
3,251,884	+				-0.5
3,251,884	+				+0.7
3,251,884	+				+0.1
3,251,884	+				+2.0
3,251,884	+				+1.1
3,251,884	+				-0.4
3,251,884	+				-1.1
3,251,884	+				-0.3
3,251,884	+				-0.5
3,251,884	+				+0.5
3,251,884	+				-0.6
3,251,884	+				-0.8
3,251,884	+				+1.2
3,251,884	+				+0.2
3,251,884	+				-2.3
3,251,885	-				+0.1
3,251,885	-				+0.5
3,251,885	-				-0.9
3,251,885	-				-1.6
3,251,885	-				-0.5
3,251,885	-				-2.1
3,251,885	-				-1.0
3,251,885	-				-0.1
3,251,885	-				-1.1
3,251,885	-				+0.2
3,251,885	-				+1.8
3,251,885	-				+1.0
3,251,885	-				-1.7
3,251,885	-				+1.4
3,251,885	-				+0.3
3,251,885	-				-3.1
3,251,885	-				-0.1
3,251,885	-				+0.4
3,251,885	-				-1.2
3,251,885	-				-1.4
3,251,885	-				+0.7
3,251,947	-				+1.3
3,251,949	-				-1.1
3,251,949	-				-2.6
3,251,963	+				+1.3
3,251,963	+				+1.0
3,251,963	+				-0.2
3,251,963	+				+2.1
3,251,963	+				+1.5
3,251,964	-				+1.4
3,251,964	-				+2.4
3,251,964	-				+0.0
3,251,968	-				-0.5
3,252,026	+				+1.1
3,252,026	+				-2.4
3,252,026	+				-1.1
3,252,026	+				+0.3
3,252,026	+				-1.6
3,252,027	-				+2.0
3,252,027	-				+0.9
3,252,027	-				-0.2
3,252,027	-				-0.7
3,252,027	-				-1.9
3,252,027	-				-1.4
3,252,027	-				+1.4
3,252,093	+		PFLU_RS14545	0.37	-0.4
3,252,183	-		PFLU_RS14545	0.85	-0.3
3,252,212	+				-0.2
3,252,212	+				+0.4
3,252,212	+				+0.5
3,252,213	-				-0.7
3,252,213	-				+2.2
3,252,213	-				+1.5
3,252,213	-				+1.3
3,252,213	-				+0.6
3,252,213	-				-1.5
3,252,213	-				+0.5
3,252,213	-				-0.4
3,252,213	-				-2.6
3,252,213	-				-0.1
3,252,213	-				-1.4
3,252,213	-				+0.9
3,252,213	-				+0.9
3,252,219	+				-0.7
3,252,219	+				-0.4
3,252,219	+				+1.6
3,252,220	-				-0.5
3,252,220	-				+0.6
3,252,244	+				-0.6
3,252,251	-				-1.4
3,252,251	-				+1.2
3,252,280	+				-0.5
3,252,280	+				-2.1
3,252,281	-				-1.4
3,252,315	+				+1.5
3,252,315	+				+1.3
3,252,316	-				-1.2
3,252,316	-				-1.6
3,252,402	+				-2.9
3,252,421	+				+1.7
3,252,421	+				+0.3
3,252,455	+				-0.6
3,252,455	+				+0.5
3,252,455	+				-1.4
3,252,455	+				-0.1
3,252,455	+				+0.5
3,252,455	+				-0.8
3,252,456	-				-3.4
3,252,456	-				-1.7
3,252,456	-				+0.3
3,252,456	-				+0.1
3,252,456	-				-1.4
3,252,456	-				-2.1
3,252,456	-				-0.1
3,252,456	-				-2.1
3,252,456	-				-1.1
3,252,456	-				+0.2
3,252,456	-				-2.4
3,252,456	-				+1.4
3,252,456	-				+0.1
3,252,456	-				+0.3
3,252,456	-				-1.6
3,252,475	+				-0.7
3,252,475	+				+1.4
3,252,476	-				-2.6
3,252,510	+				-1.0
3,252,511	-				-3.2
3,252,511	-				-3.1
3,252,511	-				-2.6
3,252,511	-				-2.9
3,252,520	+				-2.6
3,252,520	+				-3.9
3,252,520	+				-2.4
3,252,520	+				-3.4
3,252,520	+				-2.8
3,252,520	+				-0.7
3,252,520	+				-1.7
3,252,520	+				-3.6
3,252,520	+				-1.7
3,252,520	+				-2.1
3,252,521	-				-3.2
3,252,521	-				-3.9
3,252,521	-				-1.1
3,252,521	-				-1.9
3,252,521	-				-2.7
3,252,521	-				-2.9
3,252,521	-				-3.7
3,252,521	-				-4.1
3,252,521	-				-3.4
3,252,521	-				-3.0
3,252,521	-				-3.1
3,252,521	-				-3.0
3,252,633	-		PFLU_RS14550	0.13	-4.5
3,252,728	+		PFLU_RS14550	0.25	-4.1
3,252,770	+		PFLU_RS14550	0.30	-2.4
3,252,770	+		PFLU_RS14550	0.30	-3.4
3,252,771	-		PFLU_RS14550	0.30	-3.9
3,252,815	+		PFLU_RS14550	0.35	-4.4
3,252,815	+		PFLU_RS14550	0.35	-3.0
3,252,815	+		PFLU_RS14550	0.35	-2.8
3,252,816	-		PFLU_RS14550	0.35	-4.1
3,252,965	+		PFLU_RS14550	0.53	-2.3
3,252,974	+		PFLU_RS14550	0.54	-3.7
3,252,974	+		PFLU_RS14550	0.54	-4.0
3,252,974	+		PFLU_RS14550	0.54	-3.7
3,252,974	+		PFLU_RS14550	0.54	-2.6
3,252,975	-		PFLU_RS14550	0.54	-3.2
3,252,975	-		PFLU_RS14550	0.54	-0.7
3,252,975	-		PFLU_RS14550	0.54	-4.4
3,252,975	-		PFLU_RS14550	0.54	-3.4
3,253,029	-		PFLU_RS14550	0.60	-3.1
3,253,029	-		PFLU_RS14550	0.60	-4.3
3,253,074	+		PFLU_RS14550	0.66	-3.6
3,253,075	-		PFLU_RS14550	0.66	-3.9
3,253,139	+		PFLU_RS14550	0.74	-3.5
3,253,140	-		PFLU_RS14550	0.74	-2.9
3,253,157	-		PFLU_RS14550	0.76	-2.6
3,253,256	+		PFLU_RS14550	0.88	-4.0
3,253,256	+		PFLU_RS14550	0.88	-3.4
3,253,257	-		PFLU_RS14550	0.88	-3.2
3,253,302	-				-3.7
3,253,302	-				-3.2
3,253,326	-				-3.0
3,253,337	+				-1.4
3,253,337	+				-0.4
3,253,337	+				+0.0
3,253,338	-				+1.2
3,253,338	-				+0.9
3,253,355	+				-0.5
3,253,355	+				-0.4
3,253,356	-				-0.7
3,253,429	+				+0.1
3,253,429	+				+0.0
3,253,429	+				+1.3
3,253,429	+				-0.3
3,253,429	+				-0.8
3,253,430	-				+1.7
3,253,430	-				+0.4
3,253,430	-				+0.9
3,253,430	-				-0.8
3,253,430	-				+0.9
3,253,430	-				+1.8
3,253,430	-				-0.7
3,253,473	-				+1.6
3,253,487	+				-0.3
3,253,487	+				-2.1
3,253,487	+				+0.5
3,253,487	+				-1.9
3,253,487	+				+2.3
3,253,487	+				+0.6
3,253,487	+				+1.3
3,253,487	+				+0.0
3,253,487	+				-0.1
3,253,488	-				+1.7
3,253,488	-				-0.4
3,253,488	-				+0.8
3,253,488	-				+1.4
3,253,488	-				+0.3
3,253,488	-				+0.0
3,253,488	-				+1.5
3,253,488	-				-2.8
3,253,488	-				+1.1
3,253,488	-				+1.3
3,253,488	-				-0.3
3,253,488	-				+2.4
3,253,491	+				-0.5
3,253,491	+				+2.8
3,253,491	+				-1.9
3,253,491	+				+1.7
3,253,491	+				+0.8
3,253,492	-				-2.1
3,253,492	-				+1.8
3,253,492	-				-1.4
3,253,492	-				-0.8
3,253,628	+		PFLU_RS14555	0.12	+0.3
3,253,629	-		PFLU_RS14555	0.12	+0.8
3,253,629	-		PFLU_RS14555	0.12	+2.1
3,253,991	+		PFLU_RS14555	0.39	+1.6
3,253,991	+		PFLU_RS14555	0.39	+1.2
3,253,991	+		PFLU_RS14555	0.39	+0.0
3,253,991	+		PFLU_RS14555	0.39	-0.3
3,253,992	-		PFLU_RS14555	0.39	+0.9
3,253,992	-		PFLU_RS14555	0.39	-0.3
3,253,992	-		PFLU_RS14555	0.39	+1.9
3,253,992	-		PFLU_RS14555	0.39	-0.7
3,253,992	-		PFLU_RS14555	0.39	-1.9
3,254,237	+		PFLU_RS14555	0.57	+2.3
3,254,238	-		PFLU_RS14555	0.57	-0.4