Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS14155

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
3,165,068	+				+0.6
3,165,068	+				-0.7
3,165,069	-				-0.3
3,165,069	-				-1.0
3,165,069	-				-1.7
3,165,069	-				-0.4
3,165,097	+				-1.4
3,165,226	+		PFLU_RS14150	0.17	+0.2
3,165,226	+		PFLU_RS14150	0.17	-0.1
3,165,226	+		PFLU_RS14150	0.17	-0.5
3,165,226	+		PFLU_RS14150	0.17	+0.8
3,165,226	+		PFLU_RS14150	0.17	-1.9
3,165,226	+		PFLU_RS14150	0.17	-0.6
3,165,226	+		PFLU_RS14150	0.17	-2.1
3,165,226	+		PFLU_RS14150	0.17	+5.0
3,165,227	-		PFLU_RS14150	0.17	-3.5
3,165,227	-		PFLU_RS14150	0.17	+0.5
3,165,227	-		PFLU_RS14150	0.17	+0.2
3,165,227	-		PFLU_RS14150	0.17	-0.7
3,165,227	-		PFLU_RS14150	0.17	+0.2
3,165,227	-		PFLU_RS14150	0.17	-1.1
3,165,227	-		PFLU_RS14150	0.17	+0.3
3,165,227	-		PFLU_RS14150	0.17	+0.9
3,165,246	+		PFLU_RS14150	0.20	+0.9
3,165,247	-		PFLU_RS14150	0.20	-0.3
3,165,247	-		PFLU_RS14150	0.20	+0.3
3,165,247	-		PFLU_RS14150	0.20	-0.2
3,165,247	-		PFLU_RS14150	0.20	+0.4
3,165,247	-		PFLU_RS14150	0.20	+2.0
3,165,247	-		PFLU_RS14150	0.20	-1.5
3,165,247	-		PFLU_RS14150	0.20	-0.4
3,165,247	-		PFLU_RS14150	0.20	+1.3
3,165,247	-		PFLU_RS14150	0.20	-2.2
3,165,250	+		PFLU_RS14150	0.20	+1.5
3,165,251	-		PFLU_RS14150	0.21	-1.1
3,165,280	+		PFLU_RS14150	0.25	-1.7
3,165,281	-		PFLU_RS14150	0.25	-0.1
3,165,281	-		PFLU_RS14150	0.25	+1.6
3,165,281	-		PFLU_RS14150	0.25	-3.1
3,165,281	-		PFLU_RS14150	0.25	-0.8
3,165,401	-		PFLU_RS14150	0.42	+0.4
3,165,489	+		PFLU_RS14150	0.54	-2.1
3,165,490	-		PFLU_RS14150	0.54	-0.2
3,165,490	-		PFLU_RS14150	0.54	-2.1
3,165,490	-		PFLU_RS14150	0.54	+1.2
3,165,490	-		PFLU_RS14150	0.54	-1.1
3,165,512	-		PFLU_RS14150	0.57	+0.6
3,165,512	-		PFLU_RS14150	0.57	+1.1
3,165,523	+		PFLU_RS14150	0.59	+0.7
3,165,523	+		PFLU_RS14150	0.59	-2.7
3,165,523	+		PFLU_RS14150	0.59	-0.5
3,165,524	-		PFLU_RS14150	0.59	+0.8
3,165,524	-		PFLU_RS14150	0.59	+1.6
3,165,524	-		PFLU_RS14150	0.59	-0.1
3,165,575	+		PFLU_RS14150	0.66	+0.6
3,165,575	+		PFLU_RS14150	0.66	+1.7
3,165,575	+		PFLU_RS14150	0.66	+1.3
3,165,576	-		PFLU_RS14150	0.66	-2.5
3,165,576	-		PFLU_RS14150	0.66	-3.4
3,165,576	-		PFLU_RS14150	0.66	+2.5
3,165,576	-		PFLU_RS14150	0.66	+0.1
3,165,625	+		PFLU_RS14150	0.73	-1.5
3,165,626	-		PFLU_RS14150	0.73	+1.1
3,165,626	-		PFLU_RS14150	0.73	-1.1
3,165,665	+		PFLU_RS14150	0.79	-0.4
3,165,665	+		PFLU_RS14150	0.79	-0.5
3,165,665	+		PFLU_RS14150	0.79	-0.8
3,165,665	+		PFLU_RS14150	0.79	-2.0
3,165,665	+		PFLU_RS14150	0.79	-1.6
3,165,666	-		PFLU_RS14150	0.79	-0.1
3,165,684	+		PFLU_RS14150	0.81	+0.2
3,165,729	+		PFLU_RS14150	0.88	-1.0
3,165,729	+		PFLU_RS14150	0.88	-1.7
3,165,729	+		PFLU_RS14150	0.88	+0.5
3,165,729	+		PFLU_RS14150	0.88	+0.3
3,165,730	-		PFLU_RS14150	0.88	-0.7
3,165,836	+				-0.8
3,165,873	+				+0.8
3,165,873	+				+0.5
3,165,895	-				-1.4
3,165,905	-				+0.3
3,165,905	-				+0.9
3,165,950	+				-0.1
3,165,950	+				+0.3
3,165,951	-				+1.0
3,165,971	+				-1.1
3,165,971	+				-2.4
3,165,972	-				-1.2
3,165,972	-				-1.4
3,165,972	-				-2.1
3,165,983	+				+0.8
3,165,984	-				+1.4
3,166,010	+				+1.5
3,166,011	-				+1.2
3,166,011	-				-0.4
3,166,018	+				-0.0
3,166,058	-				+2.4
3,166,065	-				+0.5
3,166,153	+		PFLU_RS14155	0.43	+0.9
3,166,154	-		PFLU_RS14155	0.43	-1.0
3,166,154	-		PFLU_RS14155	0.43	-1.1
3,166,230	-		PFLU_RS14155	0.80	-2.1
3,166,255	+				+0.1
3,166,255	+				-0.9
3,166,255	+				-1.7
3,166,255	+				-1.5
3,166,255	+				+0.3
3,166,256	-				-0.1
3,166,256	-				-0.4
3,166,256	-				+0.4
3,166,301	-				+0.1
3,166,301	-				-0.6
3,166,301	-				-0.2
3,166,301	-				+0.3
3,166,328	-				+2.9
3,166,329	+				+0.3
3,166,329	+				-0.2
3,166,329	+				-2.9
3,166,329	+				-0.1
3,166,329	+				+1.1
3,166,329	+				-0.5
3,166,329	+				+1.7
3,166,329	+				+4.4
3,166,330	-				+0.5
3,166,330	-				+0.9
3,166,330	-				-1.7
3,166,330	-				-0.7
3,166,330	-				-0.7
3,166,330	-				+1.5
3,166,330	-				-1.4
3,166,330	-				-1.8
3,166,330	-				-1.1
3,166,330	-				+2.1
3,166,357	-				-2.4
3,166,430	+				-0.1
3,166,430	+				-0.3
3,166,431	-				-0.7
3,166,431	-				-1.4
3,166,431	-				+0.9
3,166,440	+				-0.4
3,166,440	+				-0.8
3,166,441	-				-2.0
3,166,441	-				+0.6
3,166,480	-				+2.1
3,166,533	+				+0.8
3,166,539	-				+0.8
3,166,539	-				+0.6
3,166,539	-				+0.5
3,166,670	+				-0.1
3,166,670	+				-0.4
3,166,670	+				+0.1
3,166,670	+				-0.2
3,166,671	-				-1.1
3,166,671	-				+1.8
3,166,671	-				+1.6
3,166,671	-				-1.1
3,166,671	-				-0.7
3,166,671	-				+0.6
3,166,671	-				+0.6
3,166,688	+				+0.1
3,166,688	+				+0.8
3,166,688	+				-3.1
3,166,688	+				+1.6
3,166,688	+				-0.2
3,166,689	-				-1.1
3,166,689	-				-0.7
3,166,689	-				+0.9
3,166,689	-				-0.1
3,166,689	-				+2.4
3,166,689	-				-0.6
3,166,689	-				+0.8
3,166,689	-				-1.1
3,166,689	-				-0.1
3,166,689	-				-2.2
3,166,689	-				+0.3
3,166,689	-				+2.3
3,166,793	-				-1.2
3,166,943	+		PFLU_RS14160	0.22	-0.9
3,166,943	+		PFLU_RS14160	0.22	+1.1
3,166,943	+		PFLU_RS14160	0.22	+0.1
3,166,943	+		PFLU_RS14160	0.22	+0.3
3,166,944	-		PFLU_RS14160	0.22	+2.3
3,167,008	+		PFLU_RS14160	0.27	+0.0
3,167,008	+		PFLU_RS14160	0.27	+1.6
3,167,009	-		PFLU_RS14160	0.27	-2.4