Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS13565

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
3,069,976	+				-0.5
3,069,977	-				+2.0
3,069,977	-				+1.0
3,070,021	+				-0.4
3,070,176	+		PFLU_RS13560	0.24	-0.0
3,070,176	+		PFLU_RS13560	0.24	+0.7
3,070,316	+		PFLU_RS13560	0.42	-4.6
3,070,316	+		PFLU_RS13560	0.42	+0.6
3,070,316	+		PFLU_RS13560	0.42	-2.0
3,070,316	+		PFLU_RS13560	0.42	-0.8
3,070,316	+		PFLU_RS13560	0.42	-0.3
3,070,317	-		PFLU_RS13560	0.42	+3.4
3,070,317	-		PFLU_RS13560	0.42	+0.7
3,070,317	-		PFLU_RS13560	0.42	+0.8
3,070,317	-		PFLU_RS13560	0.42	+0.6
3,070,317	-		PFLU_RS13560	0.42	-0.9
3,070,317	-		PFLU_RS13560	0.42	+1.1
3,070,412	+		PFLU_RS13560	0.54	+1.4
3,070,413	-		PFLU_RS13560	0.54	+1.8
3,070,413	-		PFLU_RS13560	0.54	-2.4
3,070,472	+		PFLU_RS13560	0.62	+0.9
3,070,473	-		PFLU_RS13560	0.62	-0.2
3,070,563	-		PFLU_RS13560	0.73	+1.5
3,070,750	+				+2.6
3,070,750	+				+2.0
3,070,750	+				+2.1
3,070,750	+				-2.0
3,070,751	-				-0.4
3,070,751	-				+1.6
3,070,751	-				+0.3
3,070,751	-				-0.9
3,070,781	+				-2.0
3,070,781	+				+1.0
3,070,781	+				-0.1
3,070,782	-				-0.6
3,070,782	-				+0.4
3,070,782	-				-1.8
3,070,784	+				+0.2
3,070,785	-				-1.1
3,070,785	-				-1.5
3,070,819	-				-0.6
3,070,895	-				+2.7
3,070,903	+				-0.7
3,070,903	+				+0.1
3,070,903	+				+0.7
3,070,903	+				+1.6
3,070,904	-				-3.0
3,070,904	-				-0.4
3,070,904	-				+0.5
3,070,904	-				-3.3
3,070,936	+				+1.0
3,070,936	+				+0.7
3,070,936	+				-0.6
3,070,936	+				-0.1
3,070,936	+				+1.5
3,070,995	+				-3.2
3,071,233	-		PFLU_RS13565	0.39	+0.5
3,071,233	-		PFLU_RS13565	0.39	-1.4
3,071,233	-		PFLU_RS13565	0.39	+1.5
3,071,234	+		PFLU_RS13565	0.39	-1.0
3,071,234	+		PFLU_RS13565	0.39	+1.6
3,071,234	+		PFLU_RS13565	0.39	-3.4
3,071,235	-		PFLU_RS13565	0.39	-1.2
3,071,235	-		PFLU_RS13565	0.39	-0.1
3,071,235	-		PFLU_RS13565	0.39	-0.3
3,071,235	-		PFLU_RS13565	0.39	+0.4
3,071,235	-		PFLU_RS13565	0.39	-1.3
3,071,235	-		PFLU_RS13565	0.39	+1.7
3,071,235	-		PFLU_RS13565	0.39	-1.0
3,071,235	-		PFLU_RS13565	0.39	-1.0
3,071,235	-		PFLU_RS13565	0.39	-1.5
3,071,282	+		PFLU_RS13565	0.46	+0.5
3,071,282	+		PFLU_RS13565	0.46	+3.9
3,071,283	-		PFLU_RS13565	0.46	-0.1
3,071,283	-		PFLU_RS13565	0.46	-0.3
3,071,283	-		PFLU_RS13565	0.46	+0.5
3,071,283	-		PFLU_RS13565	0.46	+1.6
3,071,283	-		PFLU_RS13565	0.46	-0.6
3,071,283	-		PFLU_RS13565	0.46	-0.9
3,071,283	-		PFLU_RS13565	0.46	-1.4
3,071,283	-		PFLU_RS13565	0.46	+0.5
3,071,283	-		PFLU_RS13565	0.46	+1.1
3,071,283	-		PFLU_RS13565	0.46	+0.2
3,071,283	-		PFLU_RS13565	0.46	-1.0
3,071,283	-		PFLU_RS13565	0.46	+1.1
3,071,364	+		PFLU_RS13565	0.57	-3.0
3,071,384	+		PFLU_RS13565	0.60	-0.8
3,071,384	+		PFLU_RS13565	0.60	-0.5
3,071,384	+		PFLU_RS13565	0.60	-1.3
3,071,384	+		PFLU_RS13565	0.60	-1.0
3,071,384	+		PFLU_RS13565	0.60	+0.1
3,071,385	-		PFLU_RS13565	0.60	+1.4
3,071,385	-		PFLU_RS13565	0.60	+0.1
3,071,385	-		PFLU_RS13565	0.60	-1.6
3,071,390	+		PFLU_RS13565	0.61	+1.2
3,071,390	+		PFLU_RS13565	0.61	-0.8
3,071,390	+		PFLU_RS13565	0.61	-0.4
3,071,390	+		PFLU_RS13565	0.61	-2.7
3,071,391	-		PFLU_RS13565	0.61	+1.6
3,071,391	-		PFLU_RS13565	0.61	-0.7
3,071,391	-		PFLU_RS13565	0.61	-1.8
3,071,391	-		PFLU_RS13565	0.61	-1.3
3,071,394	+		PFLU_RS13565	0.61	+1.0
3,071,394	+		PFLU_RS13565	0.61	+0.5
3,071,394	+		PFLU_RS13565	0.61	+0.1
3,071,395	-		PFLU_RS13565	0.62	-0.2
3,071,395	-		PFLU_RS13565	0.62	+0.5
3,071,395	-		PFLU_RS13565	0.62	-1.4
3,071,410	-		PFLU_RS13565	0.64	+1.4
3,071,410	-		PFLU_RS13565	0.64	+0.9
3,071,417	+		PFLU_RS13565	0.65	-0.4
3,071,417	+		PFLU_RS13565	0.65	+0.6
3,071,418	-		PFLU_RS13565	0.65	-0.3
3,071,418	-		PFLU_RS13565	0.65	+0.6
3,071,418	-		PFLU_RS13565	0.65	-0.3
3,071,418	-		PFLU_RS13565	0.65	+0.8
3,071,418	-		PFLU_RS13565	0.65	+1.1
3,071,418	-		PFLU_RS13565	0.65	-0.0
3,071,418	-		PFLU_RS13565	0.65	+2.1
3,071,418	-		PFLU_RS13565	0.65	+0.1
3,071,418	-		PFLU_RS13565	0.65	-0.4
3,071,426	+		PFLU_RS13565	0.66	+0.8
3,071,426	+		PFLU_RS13565	0.66	+0.7
3,071,426	+		PFLU_RS13565	0.66	+0.9
3,071,427	-		PFLU_RS13565	0.66	+2.0
3,071,471	-		PFLU_RS13565	0.72	-3.1
3,071,599	+				+1.3
3,071,650	+				+3.6
3,071,651	-				-1.1
3,071,651	-				+0.3
3,071,651	-				+2.2
3,071,651	-				-0.6
3,071,651	-				-1.0
3,071,784	-				-2.9
3,071,790	+				+1.7
3,071,790	+				-3.3
3,071,790	+				+2.4
3,071,790	+				+0.8
3,071,791	-				+3.6
3,071,791	-				-0.4
3,071,795	+				-2.0
3,071,795	+				+0.7
3,071,867	-				-2.5
3,071,867	-				-0.5
3,072,036	+		PFLU_RS13570	0.24	+0.7
3,072,037	-		PFLU_RS13570	0.24	+1.3
3,072,037	-		PFLU_RS13570	0.24	+1.7
3,072,099	+		PFLU_RS13570	0.31	-0.6
3,072,239	+		PFLU_RS13570	0.46	-2.2
3,072,239	+		PFLU_RS13570	0.46	-0.5
3,072,239	+		PFLU_RS13570	0.46	+1.7
3,072,239	+		PFLU_RS13570	0.46	+0.4
3,072,240	-		PFLU_RS13570	0.46	-1.6
3,072,240	-		PFLU_RS13570	0.46	+0.6
3,072,240	-		PFLU_RS13570	0.46	-1.7
3,072,288	+		PFLU_RS13570	0.51	-2.8
3,072,288	+		PFLU_RS13570	0.51	+0.1
3,072,289	-		PFLU_RS13570	0.51	-0.4
3,072,481	-		PFLU_RS13570	0.72	-0.5
3,072,504	+		PFLU_RS13570	0.75	+0.8
3,072,504	+		PFLU_RS13570	0.75	-1.2
3,072,504	+		PFLU_RS13570	0.75	-0.5
3,072,504	+		PFLU_RS13570	0.75	-0.3
3,072,504	+		PFLU_RS13570	0.75	+1.3
3,072,504	+		PFLU_RS13570	0.75	+0.1
3,072,504	+		PFLU_RS13570	0.75	-0.1
3,072,504	+		PFLU_RS13570	0.75	+2.7
3,072,504	+		PFLU_RS13570	0.75	+0.7
3,072,504	+		PFLU_RS13570	0.75	-0.4
3,072,504	+		PFLU_RS13570	0.75	+1.8
3,072,504	+		PFLU_RS13570	0.75	+0.1
3,072,504	+		PFLU_RS13570	0.75	-2.8
3,072,505	-		PFLU_RS13570	0.75	-0.7
3,072,505	-		PFLU_RS13570	0.75	+2.2
3,072,505	-		PFLU_RS13570	0.75	+2.1
3,072,505	-		PFLU_RS13570	0.75	+0.1
3,072,505	-		PFLU_RS13570	0.75	-0.4
3,072,505	-		PFLU_RS13570	0.75	+0.3
3,072,505	-		PFLU_RS13570	0.75	+1.7
3,072,605	+		PFLU_RS13570	0.86	-1.0
3,072,606	-		PFLU_RS13570	0.86	-0.4
3,072,606	-		PFLU_RS13570	0.86	-0.7
3,072,606	-		PFLU_RS13570	0.86	+1.8