Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS13540

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
3,065,065	+		PFLU_RS13525	0.79	-0.4
3,065,065	+		PFLU_RS13525	0.79	+1.3
3,065,297	+				-0.8
3,065,297	+				-0.0
3,065,297	+				+0.1
3,065,298	-				-3.0
3,065,303	+				+1.8
3,065,304	-				-2.4
3,065,358	+		PFLU_RS13530	0.20	+0.4
3,065,358	+		PFLU_RS13530	0.20	-1.0
3,065,359	-		PFLU_RS13530	0.20	-2.0
3,065,498	-		PFLU_RS13530	0.73	+0.3
3,065,513	-		PFLU_RS13530	0.79	+1.3
3,065,513	-		PFLU_RS13530	0.79	+1.5
3,065,513	-		PFLU_RS13530	0.79	+1.1
3,065,575	+				+1.3
3,065,575	+				+1.8
3,065,576	-				-1.4
3,065,579	+				-1.4
3,065,579	+				+0.0
3,065,580	-				-3.0
3,065,580	-				+0.2
3,065,634	+				+1.7
3,065,635	-				-0.4
3,065,635	-				-1.9
3,065,635	-				+1.2
3,065,635	-				-0.9
3,065,635	-				-2.2
3,065,696	-		PFLU_RS13535	0.16	+0.5
3,065,702	-		PFLU_RS13535	0.18	-0.0
3,065,816	+		PFLU_RS13535	0.47	+0.6
3,065,816	+		PFLU_RS13535	0.47	-0.4
3,065,816	+		PFLU_RS13535	0.47	-1.0
3,065,816	+		PFLU_RS13535	0.47	-0.6
3,065,816	+		PFLU_RS13535	0.47	-0.9
3,065,816	+		PFLU_RS13535	0.47	+0.3
3,065,816	+		PFLU_RS13535	0.47	+1.3
3,065,816	+		PFLU_RS13535	0.47	-0.8
3,065,817	-		PFLU_RS13535	0.48	-1.9
3,065,817	-		PFLU_RS13535	0.48	-0.6
3,065,817	-		PFLU_RS13535	0.48	+0.7
3,065,817	-		PFLU_RS13535	0.48	+1.5
3,065,839	-		PFLU_RS13535	0.53	+1.1
3,065,839	-		PFLU_RS13535	0.53	+0.4
3,065,987	+				-2.9
3,065,987	+				+0.6
3,065,987	+				+2.5
3,065,987	+				+4.3
3,065,987	+				-1.4
3,065,987	+				-1.7
3,065,987	+				+0.5
3,065,988	-				+1.9
3,065,988	-				+1.4
3,065,988	-				-1.9
3,065,988	-				+1.6
3,066,053	+				-2.7
3,066,053	+				-1.7
3,066,053	+				+1.1
3,066,053	+				-0.8
3,066,053	+				-0.1
3,066,053	+				+1.2
3,066,053	+				-0.0
3,066,053	+				-0.6
3,066,054	-				+0.6
3,066,054	-				-3.0
3,066,054	-				-0.3
3,066,054	-				-0.9
3,066,054	-				-2.0
3,066,054	-				+2.0
3,066,054	-				-0.6
3,066,054	-				+0.2
3,066,056	+				-0.0
3,066,056	+				+0.8
3,066,056	+				+1.0
3,066,056	+				+1.7
3,066,056	+				-1.3
3,066,056	+				-0.3
3,066,057	-				+0.5
3,066,057	-				+1.8
3,066,057	-				-0.2
3,066,057	-				-2.4
3,066,057	-				+1.3
3,066,057	-				+1.3
3,066,057	-				-0.5
3,066,057	-				-0.3
3,066,095	+				-0.6
3,066,096	-				-1.4
3,066,104	+				-0.0
3,066,105	-				-0.6
3,066,566	+		PFLU_RS13540	0.41	-0.6
3,066,566	+		PFLU_RS13540	0.41	-0.0
3,066,566	+		PFLU_RS13540	0.41	+1.0
3,066,566	+		PFLU_RS13540	0.41	-0.0
3,066,567	-		PFLU_RS13540	0.41	-1.0
3,066,567	-		PFLU_RS13540	0.41	+1.0
3,066,599	+		PFLU_RS13540	0.44	-1.0
3,066,704	+		PFLU_RS13540	0.52	-0.0
3,066,791	+		PFLU_RS13540	0.59	-0.6
3,066,792	-		PFLU_RS13540	0.59	-0.6
3,066,792	-		PFLU_RS13540	0.59	-1.6
3,066,792	-		PFLU_RS13540	0.59	-1.4
3,066,947	+		PFLU_RS13540	0.71	-1.4
3,066,947	+		PFLU_RS13540	0.71	-0.0
3,066,947	+		PFLU_RS13540	0.71	+1.0
3,066,947	+		PFLU_RS13540	0.71	+1.0
3,066,947	+		PFLU_RS13540	0.71	+1.0
3,066,948	-		PFLU_RS13540	0.71	-0.6
3,066,948	-		PFLU_RS13540	0.71	-0.0
3,067,311	+				-0.6
3,067,311	+				+2.8
3,067,311	+				-0.0
3,067,312	-				-0.0
3,067,312	-				-2.2
3,067,312	-				-2.2
3,067,376	+				+0.2
3,067,378	+				+1.0
3,067,378	+				+1.1
3,067,378	+				+1.8
3,067,378	+				-0.4
3,067,378	+				-1.6
3,067,378	+				+0.8
3,067,378	+				+0.3
3,067,378	+				+1.0
3,067,379	-				-1.4
3,067,379	-				-1.5
3,067,379	-				+1.5
3,067,379	-				+1.5
3,067,379	-				+0.2
3,067,379	-				+0.7
3,067,426	-				+1.0
3,067,433	-				-0.9
3,067,433	-				+0.3
3,067,507	+				-0.0
3,067,507	+				-0.2
3,067,507	+				-0.3
3,067,507	+				-3.0
3,067,507	+				-0.3
3,067,507	+				+1.0
3,067,508	-				-2.9
3,067,508	-				-1.0
3,067,516	+				-0.0
3,067,517	-				-0.8
3,067,517	-				-1.0
3,067,517	-				+1.3
3,067,517	-				-0.9
3,067,534	+				+3.8
3,067,534	+				+0.7
3,067,535	-				+0.7
3,067,535	-				-2.7
3,067,593	+		PFLU_RS13545	0.15	+1.5
3,067,593	+		PFLU_RS13545	0.15	-1.0
3,067,593	+		PFLU_RS13545	0.15	+0.2
3,067,593	+		PFLU_RS13545	0.15	-2.2
3,067,593	+		PFLU_RS13545	0.15	-1.0
3,067,593	+		PFLU_RS13545	0.15	+1.4
3,067,593	+		PFLU_RS13545	0.15	+0.1
3,067,593	+		PFLU_RS13545	0.15	-1.5
3,067,593	+		PFLU_RS13545	0.15	+0.3
3,067,593	+		PFLU_RS13545	0.15	+1.8
3,067,593	+		PFLU_RS13545	0.15	+1.4
3,067,593	+		PFLU_RS13545	0.15	-0.9
3,067,593	+		PFLU_RS13545	0.15	-0.4
3,067,593	+		PFLU_RS13545	0.15	-0.6
3,067,593	+		PFLU_RS13545	0.15	-0.4
3,067,593	+		PFLU_RS13545	0.15	+1.0
3,067,594	-		PFLU_RS13545	0.16	-2.4
3,067,594	-		PFLU_RS13545	0.16	-1.2
3,067,594	-		PFLU_RS13545	0.16	-0.7
3,067,594	-		PFLU_RS13545	0.16	+2.4
3,067,594	-		PFLU_RS13545	0.16	-0.9
3,067,594	-		PFLU_RS13545	0.16	-0.7
3,067,594	-		PFLU_RS13545	0.16	+0.7
3,067,594	-		PFLU_RS13545	0.16	-0.6
3,067,594	-		PFLU_RS13545	0.16	+0.9
3,067,715	-		PFLU_RS13545	0.37	+0.5
3,067,715	-		PFLU_RS13545	0.37	+1.9
3,067,963	+		PFLU_RS13545	0.81	+0.3
3,068,009	-		PFLU_RS13545	0.89	+0.4
3,068,075	+				+0.1
3,068,082	+				+0.4
3,068,083	-				+2.0
3,068,083	-				+0.7
3,068,112	+				-0.4
3,068,168	+				+1.3
3,068,169	-				+0.4