Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07650

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
1,699,734	+				-0.4
1,699,734	+				-0.8
1,699,734	+				-3.5
1,699,734	+				+0.8
1,699,734	+				+1.3
1,699,735	-				-1.1
1,699,735	-				-2.1
1,699,744	-				-0.8
1,699,793	+				-0.8
1,699,793	+				+1.4
1,699,794	-				+2.7
1,699,807	+				-1.7
1,699,807	+				+0.7
1,699,807	+				-0.6
1,699,807	+				+0.1
1,699,807	+				-1.7
1,699,807	+				+0.8
1,699,807	+				-2.7
1,699,808	-				+1.8
1,699,808	-				+2.3
1,699,808	-				+2.3
1,699,808	-				-0.8
1,699,813	+				+1.5
1,699,813	+				-0.4
1,699,813	+				-1.1
1,699,813	+				+1.5
1,699,813	+				-1.1
1,699,813	+				-2.4
1,699,813	+				-0.4
1,699,813	+				+0.9
1,699,813	+				-0.0
1,699,813	+				-1.5
1,699,813	+				+0.9
1,699,813	+				+1.0
1,699,813	+				+0.6
1,699,813	+				-0.8
1,699,813	+				+0.2
1,699,813	+				+0.5
1,699,813	+				-2.1
1,699,813	+				-0.3
1,699,813	+				-0.7
1,699,813	+				-0.2
1,699,813	+				-0.4
1,699,813	+				-3.6
1,699,813	+				+2.4
1,699,813	+				+0.6
1,699,813	+				-1.0
1,699,813	+				-3.5
1,699,813	+				+1.2
1,699,813	+				-1.7
1,699,814	-				+2.5
1,699,814	-				+1.7
1,699,814	-				-1.7
1,699,814	-				+1.4
1,699,814	-				-2.5
1,699,814	-				+0.2
1,699,814	-				-1.2
1,699,814	-				-1.2
1,699,814	-				-2.4
1,699,814	-				+1.1
1,699,814	-				-0.2
1,699,814	-				+0.5
1,699,814	-				-2.2
1,699,814	-				+0.1
1,699,814	-				-0.8
1,699,814	-				+1.3
1,699,814	-				-0.6
1,699,814	-				-1.8
1,699,814	-				+1.4
1,699,814	-				-1.1
1,699,913	-		PFLU_RS07645	0.23	-1.7
1,700,048	+		PFLU_RS07645	0.53	+0.0
1,700,148	-		PFLU_RS07645	0.76	-2.6
1,700,148	-		PFLU_RS07645	0.76	-0.5
1,700,148	-		PFLU_RS07645	0.76	-0.0
1,700,183	+		PFLU_RS07645	0.84	+1.2
1,700,183	+		PFLU_RS07645	0.84	+1.1
1,700,183	+		PFLU_RS07645	0.84	-0.8
1,700,183	+		PFLU_RS07645	0.84	-0.2
1,700,183	+		PFLU_RS07645	0.84	-0.2
1,700,184	-		PFLU_RS07645	0.84	+0.5
1,700,184	-		PFLU_RS07645	0.84	-1.7
1,700,184	-		PFLU_RS07645	0.84	-0.2
1,700,263	+				-0.9
1,700,263	+				+1.3
1,700,264	-				+1.6
1,700,264	-				-1.5
1,700,389	+				+1.6
1,700,401	-				+3.0
1,700,406	+				-2.0
1,700,406	+				+0.4
1,700,406	+				+1.4
1,700,407	-				-0.3
1,700,407	-				-0.3
1,700,407	-				-2.6
1,700,501	-				-0.5
1,700,567	+				+1.3
1,700,567	+				-1.0
1,700,600	+				-2.9
1,700,600	+				+0.8
1,700,600	+				+0.6
1,700,601	-				+0.8
1,700,601	-				-0.6
1,700,699	+				+0.9
1,700,699	+				-2.3
1,700,700	-				-0.1
1,700,700	-				-1.8
1,700,700	-				-1.7
1,700,700	-				-3.0
1,700,700	-				-0.2
1,700,700	-				-1.6
1,700,715	+				+0.2
1,700,739	+				-2.1
1,700,739	+				-1.2
1,700,739	+				-2.9
1,700,740	-				-2.4
1,700,740	-				-1.0
1,700,740	-				-3.3
1,700,740	-				-2.6
1,700,740	-				-3.3
1,700,747	+				-2.5
1,700,747	+				-1.4
1,700,748	-				-1.9
1,700,748	-				-3.2
1,700,836	+				-2.7
1,700,837	-				-3.4
1,700,863	+				-3.1
1,701,043	+		PFLU_RS07650	0.14	-3.8
1,701,168	+		PFLU_RS07650	0.20	-2.6
1,701,168	+		PFLU_RS07650	0.20	-3.7
1,701,168	+		PFLU_RS07650	0.20	-3.7
1,701,168	+		PFLU_RS07650	0.20	-2.5
1,701,169	-		PFLU_RS07650	0.20	-3.7
1,701,169	-		PFLU_RS07650	0.20	-2.3
1,701,169	-		PFLU_RS07650	0.20	-3.3
1,701,366	+		PFLU_RS07650	0.29	-3.0
1,701,366	+		PFLU_RS07650	0.29	-2.8
1,701,478	-		PFLU_RS07650	0.35	-4.6
1,701,651	+		PFLU_RS07650	0.43	-2.8
1,701,652	-		PFLU_RS07650	0.43	-2.6
1,701,652	-		PFLU_RS07650	0.43	-3.6
1,701,689	-		PFLU_RS07650	0.45	-3.1
1,701,723	+		PFLU_RS07650	0.46	-2.1
1,701,724	-		PFLU_RS07650	0.46	-3.4
1,701,884	+		PFLU_RS07650	0.54	-3.2
1,701,884	+		PFLU_RS07650	0.54	-1.8
1,701,884	+		PFLU_RS07650	0.54	-3.1
1,701,884	+		PFLU_RS07650	0.54	-3.5
1,701,884	+		PFLU_RS07650	0.54	-4.3
1,701,885	-		PFLU_RS07650	0.54	-2.4
1,701,894	+		PFLU_RS07650	0.54	-0.9
1,701,894	+		PFLU_RS07650	0.54	-3.5
1,701,894	+		PFLU_RS07650	0.54	-3.3
1,701,895	-		PFLU_RS07650	0.54	-3.4
1,702,001	+		PFLU_RS07650	0.59	-3.1
1,702,001	+		PFLU_RS07650	0.59	-3.4
1,702,002	-		PFLU_RS07650	0.59	-0.5
1,702,002	-		PFLU_RS07650	0.59	-3.3
1,702,002	-		PFLU_RS07650	0.59	-3.7
1,702,002	-		PFLU_RS07650	0.59	-2.8
1,702,002	-		PFLU_RS07650	0.59	-0.8
1,702,079	+		PFLU_RS07650	0.63	-3.7
1,702,080	-		PFLU_RS07650	0.63	-3.5
1,702,080	-		PFLU_RS07650	0.63	-3.2
1,702,251	+		PFLU_RS07650	0.71	-1.2
1,702,252	-		PFLU_RS07650	0.71	-1.5
1,702,347	+		PFLU_RS07650	0.75	-3.7
1,702,348	-		PFLU_RS07650	0.75	-3.4
1,702,458	+		PFLU_RS07650	0.80	-0.2
1,702,458	+		PFLU_RS07650	0.80	-1.9
1,702,459	-		PFLU_RS07650	0.80	-2.1
1,702,500	+		PFLU_RS07650	0.82	-3.3
1,702,500	+		PFLU_RS07650	0.82	-0.5
1,702,506	+		PFLU_RS07650	0.83	-3.1
1,702,507	-		PFLU_RS07650	0.83	-2.0
1,702,507	-		PFLU_RS07650	0.83	-3.8
1,702,507	-		PFLU_RS07650	0.83	-2.5
1,702,507	-		PFLU_RS07650	0.83	-2.6
1,702,507	-		PFLU_RS07650	0.83	-0.8
1,702,507	-		PFLU_RS07650	0.83	-2.4
1,702,581	+		PFLU_RS07650	0.86	-1.9
1,702,581	+		PFLU_RS07650	0.86	-2.5
1,702,581	+		PFLU_RS07650	0.86	-3.0
1,702,581	+		PFLU_RS07650	0.86	-0.8
1,702,581	+		PFLU_RS07650	0.86	-3.4
1,702,581	+		PFLU_RS07650	0.86	-2.9
1,702,582	-		PFLU_RS07650	0.86	-0.3
1,702,582	-		PFLU_RS07650	0.86	-3.1
1,702,582	-		PFLU_RS07650	0.86	-2.3
1,702,582	-		PFLU_RS07650	0.86	-2.6
1,702,582	-		PFLU_RS07650	0.86	-4.0
1,702,582	-		PFLU_RS07650	0.86	-1.2
1,702,710	+				-3.3
1,702,710	+				-3.2
1,702,710	+				-3.9
1,702,710	+				-2.5
1,702,710	+				-3.1
1,702,710	+				-1.8
1,702,711	-				-3.3
1,702,711	-				-2.9
1,702,711	-				-2.5
1,702,711	-				-3.2
1,702,711	-				-3.2
1,702,711	-				-3.0
1,702,711	-				-2.7
1,702,752	+				-4.2
1,702,752	+				-1.0
1,702,752	+				-4.0
1,702,752	+				-2.0
1,702,753	-				-3.2
1,702,753	-				-1.8
1,702,753	-				-3.2
1,702,800	+				-3.4
1,702,800	+				-2.2
1,702,800	+				-1.5
1,702,800	+				-1.0
1,702,800	+				-2.3
1,702,800	+				-2.7
1,702,800	+				-2.9
1,702,800	+				-3.6
1,702,800	+				-4.0
1,702,800	+				-3.9
1,702,800	+				-3.4
1,702,801	-				-2.8
1,702,801	-				-3.5
1,702,801	-				-2.8
1,702,801	-				-3.3
1,702,801	-				-2.5
1,702,801	-				-3.6
1,702,821	+				-3.3
1,702,821	+				-4.1
1,702,822	-				-2.7
1,702,822	-				+0.9
1,702,894	+				+1.0
1,702,895	-				-0.2
1,702,905	+				+0.4
1,702,905	+				+0.6
1,702,905	+				+0.2
1,702,906	-				-0.2
1,702,906	-				+0.5
1,702,909	+				-1.7
1,702,909	+				-1.1
1,702,910	-				+0.2
1,702,910	-				-0.3
1,702,910	-				-0.5
1,702,910	-				+0.1
1,703,336	+		PFLU_RS07655	0.36	+2.1
1,703,337	-		PFLU_RS07655	0.36	-2.3
1,703,505	-		PFLU_RS07655	0.51	-3.9
1,703,505	-		PFLU_RS07655	0.51	-1.0
1,703,630	-		PFLU_RS07655	0.61	-1.6
1,703,630	-		PFLU_RS07655	0.61	-0.7
1,703,765	+		PFLU_RS07655	0.73	-3.1
1,703,765	+		PFLU_RS07655	0.73	-0.9
1,703,766	-		PFLU_RS07655	0.73	+1.1