Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS05660

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
1,276,304	+				+0.1
1,276,391	+				-0.1
1,276,391	+				+1.7
1,276,391	+				+1.4
1,276,403	+				+0.7
1,276,403	+				+1.9
1,276,403	+				+2.0
1,276,403	+				-1.7
1,276,403	+				+2.2
1,276,404	-				+0.7
1,276,404	-				+0.7
1,276,404	-				-0.0
1,276,404	-				+1.2
1,276,404	-				-0.1
1,276,404	-				+1.0
1,276,420	+				-0.0
1,276,420	+				+1.4
1,276,420	+				+0.7
1,276,420	+				+1.2
1,276,420	+				-0.3
1,276,420	+				-0.3
1,276,421	-				-2.3
1,276,421	-				-0.5
1,276,421	-				+0.8
1,276,421	-				+0.5
1,276,421	-				+0.1
1,276,600	-		PFLU_RS05655	0.27	-1.1
1,276,953	+		PFLU_RS05655	0.74	-2.0
1,276,954	-		PFLU_RS05655	0.74	-0.8
1,276,954	-		PFLU_RS05655	0.74	-1.0
1,276,981	-		PFLU_RS05655	0.77	-0.5
1,276,981	-		PFLU_RS05655	0.77	+1.8
1,277,097	+				+1.6
1,277,098	-				+0.7
1,277,174	+				+1.0
1,277,175	-				+1.2
1,277,175	-				-2.2
1,277,219	+				+0.4
1,277,219	+				-1.2
1,277,219	+				-0.8
1,277,219	+				-1.4
1,277,219	+				+1.0
1,277,219	+				-0.1
1,277,219	+				-1.7
1,277,219	+				-0.6
1,277,220	-				-0.4
1,277,220	-				-0.2
1,277,220	-				+1.9
1,277,237	+				-0.1
1,277,238	-				+0.4
1,277,300	+				+0.9
1,277,301	-				-1.0
1,277,414	+		PFLU_RS05660	0.12	-0.1
1,277,414	+		PFLU_RS05660	0.12	+0.2
1,277,415	-		PFLU_RS05660	0.12	+1.2
1,277,415	-		PFLU_RS05660	0.12	-0.2
1,277,576	-		PFLU_RS05660	0.23	-1.5
1,277,576	-		PFLU_RS05660	0.23	-1.3
1,277,576	-		PFLU_RS05660	0.23	-0.8
1,277,576	-		PFLU_RS05660	0.23	-0.3
1,277,636	-		PFLU_RS05660	0.27	+0.8
1,277,672	+		PFLU_RS05660	0.29	-1.2
1,277,685	-		PFLU_RS05660	0.30	-1.7
1,277,720	+		PFLU_RS05660	0.32	+2.2
1,277,720	+		PFLU_RS05660	0.32	-1.9
1,277,720	+		PFLU_RS05660	0.32	-1.2
1,277,721	-		PFLU_RS05660	0.32	+0.2
1,277,721	-		PFLU_RS05660	0.32	+1.0
1,277,756	+		PFLU_RS05660	0.35	-1.6
1,277,757	-		PFLU_RS05660	0.35	+0.3
1,277,809	+		PFLU_RS05660	0.38	-1.0
1,277,810	-		PFLU_RS05660	0.38	-1.5
1,277,810	-		PFLU_RS05660	0.38	-0.1
1,277,830	+		PFLU_RS05660	0.39	-0.6
1,277,954	+		PFLU_RS05660	0.48	+1.5
1,277,954	+		PFLU_RS05660	0.48	-0.4
1,277,954	+		PFLU_RS05660	0.48	-1.0
1,277,954	+		PFLU_RS05660	0.48	-0.8
1,277,955	-		PFLU_RS05660	0.48	-0.8
1,277,955	-		PFLU_RS05660	0.48	+1.4
1,277,955	-		PFLU_RS05660	0.48	-2.0
1,277,955	-		PFLU_RS05660	0.48	-1.5
1,278,051	+		PFLU_RS05660	0.54	-0.1
1,278,051	+		PFLU_RS05660	0.54	+0.3
1,278,051	+		PFLU_RS05660	0.54	+0.2
1,278,052	-		PFLU_RS05660	0.54	-2.7
1,278,052	-		PFLU_RS05660	0.54	-0.3
1,278,059	+		PFLU_RS05660	0.55	-0.8
1,278,060	-		PFLU_RS05660	0.55	-1.6
1,278,103	+		PFLU_RS05660	0.58	-0.6
1,278,182	+		PFLU_RS05660	0.63	+0.3
1,278,326	+		PFLU_RS05660	0.72	-0.3
1,278,326	+		PFLU_RS05660	0.72	-1.8
1,278,326	+		PFLU_RS05660	0.72	+0.1
1,278,326	+		PFLU_RS05660	0.72	-1.3
1,278,326	+		PFLU_RS05660	0.72	-0.2
1,278,326	+		PFLU_RS05660	0.72	-1.8
1,278,326	+		PFLU_RS05660	0.72	-1.0
1,278,326	+		PFLU_RS05660	0.72	+0.2
1,278,327	-		PFLU_RS05660	0.72	-2.0
1,278,327	-		PFLU_RS05660	0.72	+2.0
1,278,327	-		PFLU_RS05660	0.72	-0.0
1,278,327	-		PFLU_RS05660	0.72	+0.2
1,278,327	-		PFLU_RS05660	0.72	-1.9
1,278,362	+		PFLU_RS05660	0.75	-1.5
1,278,362	+		PFLU_RS05660	0.75	-2.1
1,278,362	+		PFLU_RS05660	0.75	+0.1
1,278,362	+		PFLU_RS05660	0.75	-2.9
1,278,362	+		PFLU_RS05660	0.75	-0.7
1,278,362	+		PFLU_RS05660	0.75	-0.8
1,278,362	+		PFLU_RS05660	0.75	-1.0
1,278,362	+		PFLU_RS05660	0.75	-3.2
1,278,362	+		PFLU_RS05660	0.75	+1.3
1,278,362	+		PFLU_RS05660	0.75	+1.4
1,278,362	+		PFLU_RS05660	0.75	-1.9
1,278,362	+		PFLU_RS05660	0.75	-1.0
1,278,362	+		PFLU_RS05660	0.75	+1.9
1,278,362	+		PFLU_RS05660	0.75	-0.5
1,278,362	+		PFLU_RS05660	0.75	+0.2
1,278,363	-		PFLU_RS05660	0.75	+1.4
1,278,363	-		PFLU_RS05660	0.75	-2.5
1,278,363	-		PFLU_RS05660	0.75	+0.6
1,278,363	-		PFLU_RS05660	0.75	+0.2
1,278,363	-		PFLU_RS05660	0.75	-2.3
1,278,363	-		PFLU_RS05660	0.75	-0.4
1,278,363	-		PFLU_RS05660	0.75	-0.6
1,278,363	-		PFLU_RS05660	0.75	-3.4
1,278,363	-		PFLU_RS05660	0.75	-2.2
1,278,363	-		PFLU_RS05660	0.75	-1.5
1,278,363	-		PFLU_RS05660	0.75	-2.3
1,278,363	-		PFLU_RS05660	0.75	-0.4
1,278,363	-		PFLU_RS05660	0.75	-1.8
1,278,363	-		PFLU_RS05660	0.75	+0.8
1,278,363	-		PFLU_RS05660	0.75	+1.8
1,278,363	-		PFLU_RS05660	0.75	+0.2
1,278,363	-		PFLU_RS05660	0.75	-1.2
1,278,437	+		PFLU_RS05660	0.80	-1.3
1,278,438	-		PFLU_RS05660	0.80	-3.2
1,278,438	-		PFLU_RS05660	0.80	+1.0
1,278,438	-		PFLU_RS05660	0.80	-0.7
1,278,438	-		PFLU_RS05660	0.80	-1.3
1,278,469	+		PFLU_RS05660	0.82	-2.2
1,278,469	+		PFLU_RS05660	0.82	+0.6
1,278,470	-		PFLU_RS05660	0.82	+2.0
1,278,470	-		PFLU_RS05660	0.82	+1.0
1,278,470	-		PFLU_RS05660	0.82	+0.2
1,278,470	-		PFLU_RS05660	0.82	-0.8
1,278,615	-				-0.3
1,278,716	+				-2.9
1,278,716	+				+0.1
1,278,716	+				-2.4
1,278,716	+				-0.2
1,278,716	+				+0.8
1,278,716	+				+2.0
1,278,717	-				-2.6
1,278,717	-				-0.5
1,278,717	-				-2.9
1,278,717	-				-2.9
1,278,717	-				+0.1
1,278,717	-				-0.8
1,278,717	-				-1.0
1,278,717	-				-0.8
1,278,717	-				-0.8
1,278,717	-				-2.1
1,278,717	-				+3.1
1,278,723	+				-1.8
1,278,723	+				-2.3
1,278,724	-				-2.3
1,278,724	-				-1.5
1,278,754	-				+0.2
1,278,754	-				-0.1
1,278,764	+				+0.3
1,278,764	+				+1.6
1,278,772	+				+0.4
1,278,772	+				+1.8
1,278,772	+				-3.1
1,278,772	+				+2.1
1,278,772	+				-2.6
1,278,772	+				-2.0
1,278,773	-				-1.5
1,278,773	-				-1.4
1,278,773	-				+0.7
1,278,773	-				+1.4
1,278,773	-				+0.3
1,278,773	-				-0.8
1,278,773	-				-0.8
1,278,773	-				+1.4
1,278,773	-				+1.1
1,278,773	-				+0.5
1,278,831	+				-2.0
1,278,831	+				-0.0
1,278,831	+				-1.5
1,278,832	-				-2.9
1,278,874	+				+0.1
1,278,874	+				-2.9
1,278,874	+				-1.1
1,278,874	+				+1.1
1,278,874	+				-2.4
1,278,874	+				+0.1
1,278,874	+				+0.4
1,278,874	-				-2.3
1,278,875	-				-1.1
1,278,875	-				-1.9
1,278,875	-				-3.5
1,278,875	-				-2.9
1,278,875	-				-0.5
1,278,875	-				-2.9
1,278,875	-				-2.2
1,278,875	-				-4.1
1,278,875	-				-3.6
1,278,875	-				-3.2
1,278,875	-				-1.6
1,278,875	-				-3.6
1,278,876	+				-1.3
1,278,876	+				-0.5
1,278,876	+				-2.3
1,278,876	+				-1.1
1,278,876	+				-2.6
1,278,876	+				-0.6
1,278,877	-				-3.5
1,278,877	-				+1.3
1,278,877	-				+1.0
1,278,877	-				-0.9
1,278,877	-				-3.2
1,278,877	-				-0.7
1,278,877	-				+1.0
1,278,877	-				-0.1
1,278,877	-				-2.8
1,278,920	+		PFLU_RS05665	0.11	-0.7
1,278,920	+		PFLU_RS05665	0.11	-1.7
1,278,977	+		PFLU_RS05665	0.18	+0.2
1,278,977	+		PFLU_RS05665	0.18	+0.7
1,278,977	+		PFLU_RS05665	0.18	+2.3
1,278,977	+		PFLU_RS05665	0.18	-1.3
1,278,977	+		PFLU_RS05665	0.18	-2.7
1,278,977	+		PFLU_RS05665	0.18	-0.2
1,278,977	+		PFLU_RS05665	0.18	-0.6
1,278,977	+		PFLU_RS05665	0.18	-0.5
1,278,978	-		PFLU_RS05665	0.18	-2.8
1,278,978	-		PFLU_RS05665	0.18	+0.4
1,278,978	-		PFLU_RS05665	0.18	-3.0
1,278,978	-		PFLU_RS05665	0.18	-1.4
1,278,999	+		PFLU_RS05665	0.21	+0.2
1,279,000	-		PFLU_RS05665	0.21	-0.7
1,279,186	+		PFLU_RS05665	0.42	-1.5
1,279,186	+		PFLU_RS05665	0.42	-0.4
1,279,187	-		PFLU_RS05665	0.42	-1.2
1,279,259	+		PFLU_RS05665	0.51	-1.0
1,279,259	+		PFLU_RS05665	0.51	+1.7
1,279,329	-		PFLU_RS05665	0.59	-1.9
1,279,350	-		PFLU_RS05665	0.61	+3.2
1,279,350	-		PFLU_RS05665	0.61	-2.3
1,279,350	-		PFLU_RS05665	0.61	-0.1
1,279,358	+		PFLU_RS05665	0.62	+0.9
1,279,358	+		PFLU_RS05665	0.62	+3.0
1,279,358	+		PFLU_RS05665	0.62	-1.2
1,279,358	+		PFLU_RS05665	0.62	-1.5
1,279,359	-		PFLU_RS05665	0.62	-2.8
1,279,359	-		PFLU_RS05665	0.62	-3.0
1,279,359	-		PFLU_RS05665	0.62	+0.7
1,279,359	-		PFLU_RS05665	0.62	-0.9
1,279,359	-		PFLU_RS05665	0.62	+0.3
1,279,404	+		PFLU_RS05665	0.68	+0.1
1,279,406	+		PFLU_RS05665	0.68	-0.1
1,279,406	+		PFLU_RS05665	0.68	+0.2
1,279,406	+		PFLU_RS05665	0.68	-2.1
1,279,406	+		PFLU_RS05665	0.68	+2.0
1,279,406	+		PFLU_RS05665	0.68	-0.4
1,279,406	+		PFLU_RS05665	0.68	-1.1
1,279,406	+		PFLU_RS05665	0.68	-0.2
1,279,406	+		PFLU_RS05665	0.68	+0.4
1,279,406	+		PFLU_RS05665	0.68	-0.8
1,279,406	+		PFLU_RS05665	0.68	-1.7
1,279,406	+		PFLU_RS05665	0.68	-2.2
1,279,406	+		PFLU_RS05665	0.68	-0.7
1,279,406	+		PFLU_RS05665	0.68	-4.0
1,279,406	+		PFLU_RS05665	0.68	+2.8
1,279,406	+		PFLU_RS05665	0.68	+1.2
1,279,406	+		PFLU_RS05665	0.68	-2.3
1,279,406	+		PFLU_RS05665	0.68	-2.1
1,279,406	+		PFLU_RS05665	0.68	+0.5
1,279,406	+		PFLU_RS05665	0.68	-2.3
1,279,406	+		PFLU_RS05665	0.68	-2.5
1,279,406	+		PFLU_RS05665	0.68	-2.3
1,279,406	+		PFLU_RS05665	0.68	-1.0
1,279,406	+		PFLU_RS05665	0.68	-0.7
1,279,406	+		PFLU_RS05665	0.68	+1.4
1,279,406	+		PFLU_RS05665	0.68	+2.6
1,279,407	-		PFLU_RS05665	0.68	-1.8
1,279,407	-		PFLU_RS05665	0.68	+1.7
1,279,407	-		PFLU_RS05665	0.68	-0.5
1,279,407	-		PFLU_RS05665	0.68	-2.8
1,279,407	-		PFLU_RS05665	0.68	-1.5
1,279,407	-		PFLU_RS05665	0.68	+2.0
1,279,407	-		PFLU_RS05665	0.68	-1.0
1,279,407	-		PFLU_RS05665	0.68	+0.4
1,279,407	-		PFLU_RS05665	0.68	-1.6
1,279,407	-		PFLU_RS05665	0.68	+1.6
1,279,407	-		PFLU_RS05665	0.68	-1.2
1,279,407	-		PFLU_RS05665	0.68	-1.7
1,279,407	-		PFLU_RS05665	0.68	-1.7
1,279,407	-		PFLU_RS05665	0.68	-1.6
1,279,407	-		PFLU_RS05665	0.68	-2.2
1,279,407	-		PFLU_RS05665	0.68	-1.7
1,279,407	-		PFLU_RS05665	0.68	-2.1
1,279,407	-		PFLU_RS05665	0.68	-1.8
1,279,407	-		PFLU_RS05665	0.68	-1.0
1,279,443	+		PFLU_RS05665	0.72	-1.0
1,279,502	+		PFLU_RS05665	0.79	+0.8
1,279,502	+		PFLU_RS05665	0.79	+1.4
1,279,536	+		PFLU_RS05665	0.83	+1.0
1,279,537	-		PFLU_RS05665	0.83	-1.6
1,279,537	-		PFLU_RS05665	0.83	-2.3
1,279,537	-		PFLU_RS05665	0.83	-2.2