Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS04490

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
1,006,170	-		PFLU_RS04480	0.89	+1.5
1,006,248	+				-0.1
1,006,249	-				+2.6
1,006,249	-				+0.6
1,006,380	+		PFLU_RS04485	0.10	+0.6
1,006,380	+		PFLU_RS04485	0.10	+1.8
1,006,380	+		PFLU_RS04485	0.10	-0.5
1,006,380	+		PFLU_RS04485	0.10	+2.6
1,006,381	-		PFLU_RS04485	0.10	+1.4
1,006,381	-		PFLU_RS04485	0.10	+2.2
1,006,381	-		PFLU_RS04485	0.10	+3.2
1,006,381	-		PFLU_RS04485	0.10	+1.3
1,006,381	-		PFLU_RS04485	0.10	+1.4
1,006,381	-		PFLU_RS04485	0.10	+1.1
1,006,381	-		PFLU_RS04485	0.10	+1.6
1,006,381	-		PFLU_RS04485	0.10	+1.4
1,006,419	+		PFLU_RS04485	0.16	+2.0
1,006,419	+		PFLU_RS04485	0.16	+3.2
1,006,419	+		PFLU_RS04485	0.16	+3.1
1,006,420	-		PFLU_RS04485	0.16	+2.2
1,006,420	-		PFLU_RS04485	0.16	+1.7
1,006,420	-		PFLU_RS04485	0.16	+3.6
1,006,617	+		PFLU_RS04485	0.47	+1.4
1,006,617	+		PFLU_RS04485	0.47	+0.1
1,006,617	+		PFLU_RS04485	0.47	+3.2
1,006,617	+		PFLU_RS04485	0.47	+0.3
1,006,617	+		PFLU_RS04485	0.47	+1.2
1,006,617	+		PFLU_RS04485	0.47	+2.1
1,006,618	-		PFLU_RS04485	0.47	+1.8
1,006,618	-		PFLU_RS04485	0.47	+2.2
1,006,618	-		PFLU_RS04485	0.47	+3.5
1,006,618	-		PFLU_RS04485	0.47	+2.5
1,006,618	-		PFLU_RS04485	0.47	+1.4
1,006,621	+		PFLU_RS04485	0.48	+2.2
1,006,622	-		PFLU_RS04485	0.48	+3.1
1,006,622	-		PFLU_RS04485	0.48	+2.3
1,006,622	-		PFLU_RS04485	0.48	+1.2
1,006,694	+		PFLU_RS04485	0.59	+2.5
1,006,695	-		PFLU_RS04485	0.59	+0.1
1,006,695	-		PFLU_RS04485	0.59	+1.6
1,006,750	+		PFLU_RS04485	0.68	+2.3
1,006,800	+		PFLU_RS04485	0.76	+2.3
1,006,800	+		PFLU_RS04485	0.76	+0.8
1,006,800	+		PFLU_RS04485	0.76	+1.7
1,006,800	+		PFLU_RS04485	0.76	+0.6
1,006,800	+		PFLU_RS04485	0.76	+1.5
1,006,801	-		PFLU_RS04485	0.76	+1.8
1,006,801	-		PFLU_RS04485	0.76	+1.7
1,006,801	-		PFLU_RS04485	0.76	+3.5
1,006,801	-		PFLU_RS04485	0.76	-0.8
1,006,814	+		PFLU_RS04485	0.78	+1.7
1,006,814	+		PFLU_RS04485	0.78	+0.6
1,006,815	-		PFLU_RS04485	0.78	+2.4
1,006,815	-		PFLU_RS04485	0.78	+1.7
1,006,833	+		PFLU_RS04485	0.81	+3.0
1,006,833	+		PFLU_RS04485	0.81	+3.1
1,006,833	+		PFLU_RS04485	0.81	+3.0
1,006,834	-		PFLU_RS04485	0.81	+1.9
1,006,834	-		PFLU_RS04485	0.81	+1.9
1,006,834	-		PFLU_RS04485	0.81	+1.2
1,006,834	-		PFLU_RS04485	0.81	+2.1
1,006,834	-		PFLU_RS04485	0.81	+2.0
1,006,885	+		PFLU_RS04485	0.89	+1.6
1,006,885	+		PFLU_RS04485	0.89	+3.5
1,006,885	+		PFLU_RS04485	0.89	+3.9
1,006,886	-		PFLU_RS04485	0.89	+2.0
1,006,886	-		PFLU_RS04485	0.89	+0.8
1,006,903	+				+0.8
1,006,990	+				+0.8
1,006,991	-				-0.1
1,006,995	+				+0.9
1,006,996	-				+0.2
1,006,996	-				+2.4
1,006,996	-				-0.6
1,007,000	+				+2.1
1,007,001	-				-2.4
1,007,001	-				+3.3
1,007,018	+				+0.4
1,007,018	+				-0.1
1,007,018	+				+4.1
1,007,018	+				+1.3
1,007,019	-				+3.1
1,007,020	+				+1.5
1,007,020	+				+2.1
1,007,020	+				+1.8
1,007,021	-				-0.7
1,007,021	-				-0.6
1,007,028	+				+0.2
1,007,028	+				+1.5
1,007,028	+				+1.5
1,007,028	+				-0.2
1,007,028	+				-0.9
1,007,028	+				+3.2
1,007,028	+				+0.3
1,007,028	+				+1.7
1,007,028	+				+0.6
1,007,028	+				-2.1
1,007,029	-				+0.6
1,007,029	-				-1.9
1,007,029	-				+0.3
1,007,029	-				+1.1
1,007,029	-				+1.1
1,007,029	-				-0.3
1,007,029	-				-1.5
1,007,029	-				+0.0
1,007,029	-				-0.4
1,007,029	-				+2.1
1,007,029	-				-1.0
1,007,031	+				-1.5
1,007,031	+				-0.8
1,007,031	+				-2.1
1,007,031	+				-2.4
1,007,031	+				+0.6
1,007,031	+				-0.4
1,007,031	+				+0.0
1,007,031	+				-0.5
1,007,032	-				-0.7
1,007,032	-				-2.0
1,007,032	-				+0.5
1,007,032	-				+0.8
1,007,032	-				+2.5
1,007,032	-				-2.2
1,007,032	-				+2.4
1,007,036	+				+1.0
1,007,036	+				-0.1
1,007,037	-				-2.2
1,007,044	+				-2.9
1,007,045	-				-1.2
1,007,073	+				-0.3
1,007,073	+				-1.5
1,007,074	-				+1.0
1,007,139	+				+1.9
1,007,173	+				+1.4
1,007,174	-				-1.4
1,007,174	-				+1.8
1,007,174	-				+1.0
1,007,174	-				+3.5
1,007,245	-		PFLU_RS04490	0.23	+1.5
1,007,245	-		PFLU_RS04490	0.23	-1.2
1,007,333	-		PFLU_RS04490	0.38	+1.0
1,007,599	+		PFLU_RS04490	0.86	+1.5
1,007,599	+		PFLU_RS04490	0.86	+0.8
1,007,599	+		PFLU_RS04490	0.86	-2.1
1,007,599	+		PFLU_RS04490	0.86	+2.4
1,007,599	+		PFLU_RS04490	0.86	+1.4
1,007,599	+		PFLU_RS04490	0.86	+0.5
1,007,599	+		PFLU_RS04490	0.86	+1.1
1,007,600	-		PFLU_RS04490	0.86	+1.2
1,007,600	-		PFLU_RS04490	0.86	+1.6
1,007,600	-		PFLU_RS04490	0.86	+1.6
1,007,600	-		PFLU_RS04490	0.86	+1.4
1,007,600	-		PFLU_RS04490	0.86	-0.5
1,007,623	+				+1.0
1,007,623	+				+2.3
1,007,623	+				+3.6
1,007,623	+				-0.2
1,007,623	+				+1.2
1,007,623	+				+0.5
1,007,624	-				+0.7
1,007,624	-				+1.7
1,007,624	-				+2.0
1,007,624	-				+2.0
1,007,624	-				-1.1
1,007,624	-				-0.6
1,007,624	-				+1.2
1,007,624	-				+0.9
1,007,624	-				-2.4
1,007,624	-				+1.1
1,007,624	-				+1.7
1,007,632	+				+2.2
1,007,632	+				+0.6
1,007,633	-				-1.5
1,007,656	+				-0.1
1,007,656	+				+2.6
1,007,656	+				-0.1
1,007,656	+				-0.1
1,007,657	-				+0.4
1,007,657	-				+0.8
1,007,674	+				+1.6
1,007,674	+				-3.3
1,007,674	+				+0.2
1,007,674	+				-1.7
1,007,674	+				-1.1
1,007,674	+				-3.1
1,007,674	+				-0.4
1,007,674	+				+0.3
1,007,674	+				-1.6
1,007,674	+				-0.0
1,007,674	+				-1.9
1,007,674	+				-0.5
1,007,674	+				+0.3
1,007,674	+				+1.3
1,007,674	+				-1.4
1,007,674	+				+2.0
1,007,674	+				+0.9
1,007,674	+				+1.3
1,007,674	+				+1.2
1,007,674	+				-0.3
1,007,674	+				+1.9
1,007,674	+				-0.9
1,007,674	+				+0.8
1,007,674	+				+0.9
1,007,675	-				-0.1
1,007,675	-				-0.1
1,007,675	-				+1.7
1,007,675	-				+0.2
1,007,675	-				+2.5
1,007,675	-				-0.4
1,007,675	-				+0.9
1,007,675	-				-0.2
1,007,675	-				-0.7
1,007,675	-				-0.1
1,007,675	-				+1.4
1,007,675	-				+3.3
1,007,675	-				-1.7
1,007,675	-				+0.3
1,007,675	-				-1.7
1,007,675	-				+1.5
1,007,821	+		PFLU_RS04495	0.30	-1.7
1,007,821	+		PFLU_RS04495	0.30	-2.8
1,007,821	+		PFLU_RS04495	0.30	+1.0
1,007,821	+		PFLU_RS04495	0.30	-0.0
1,007,821	+		PFLU_RS04495	0.30	-0.7
1,007,821	+		PFLU_RS04495	0.30	-1.2
1,007,821	+		PFLU_RS04495	0.30	+0.1
1,007,821	+		PFLU_RS04495	0.30	+2.3
1,007,821	+		PFLU_RS04495	0.30	-1.9
1,007,821	+		PFLU_RS04495	0.30	-2.0
1,007,821	+		PFLU_RS04495	0.30	+0.3
1,007,821	+		PFLU_RS04495	0.30	-0.9
1,007,821	+		PFLU_RS04495	0.30	-1.9
1,007,821	+		PFLU_RS04495	0.30	-1.7
1,007,821	+		PFLU_RS04495	0.30	-0.5
1,007,821	+		PFLU_RS04495	0.30	-0.8
1,007,821	+		PFLU_RS04495	0.30	-1.2
1,007,821	+		PFLU_RS04495	0.30	+0.9
1,007,821	+		PFLU_RS04495	0.30	-0.1
1,007,821	+		PFLU_RS04495	0.30	+0.3
1,007,821	+		PFLU_RS04495	0.30	+0.3
1,007,821	+		PFLU_RS04495	0.30	-0.2
1,007,821	+		PFLU_RS04495	0.30	+0.9
1,007,821	+		PFLU_RS04495	0.30	+0.7
1,007,821	+		PFLU_RS04495	0.30	-1.6
1,007,821	+		PFLU_RS04495	0.30	-1.4
1,007,821	+		PFLU_RS04495	0.30	+0.7
1,007,822	-		PFLU_RS04495	0.30	+1.7
1,007,822	-		PFLU_RS04495	0.30	+1.2
1,007,822	-		PFLU_RS04495	0.30	-0.5
1,007,822	-		PFLU_RS04495	0.30	-2.2
1,007,822	-		PFLU_RS04495	0.30	-0.2
1,007,822	-		PFLU_RS04495	0.30	+0.1
1,007,822	-		PFLU_RS04495	0.30	+1.9
1,007,822	-		PFLU_RS04495	0.30	+0.5
1,007,822	-		PFLU_RS04495	0.30	-1.9
1,007,822	-		PFLU_RS04495	0.30	-0.1
1,007,822	-		PFLU_RS04495	0.30	+1.2
1,007,822	-		PFLU_RS04495	0.30	+0.3
1,007,822	-		PFLU_RS04495	0.30	+0.2
1,007,822	-		PFLU_RS04495	0.30	+1.1
1,007,822	-		PFLU_RS04495	0.30	+1.7
1,007,822	-		PFLU_RS04495	0.30	-3.3
1,007,822	-		PFLU_RS04495	0.30	-0.0
1,007,822	-		PFLU_RS04495	0.30	-0.5
1,007,822	-		PFLU_RS04495	0.30	+0.1
1,007,822	-		PFLU_RS04495	0.30	-0.2
1,007,822	-		PFLU_RS04495	0.30	+1.6
1,007,822	-		PFLU_RS04495	0.30	-2.5
1,007,822	-		PFLU_RS04495	0.30	+2.4
1,007,822	-		PFLU_RS04495	0.30	+1.3
1,007,822	-		PFLU_RS04495	0.30	+3.3
1,007,853	+		PFLU_RS04495	0.37	+0.7
1,007,984	+		PFLU_RS04495	0.65	+2.3
1,007,984	+		PFLU_RS04495	0.65	+0.9
1,007,984	+		PFLU_RS04495	0.65	+1.0
1,007,984	+		PFLU_RS04495	0.65	-0.6
1,007,984	+		PFLU_RS04495	0.65	-0.5
1,007,985	-		PFLU_RS04495	0.65	+2.1
1,007,985	-		PFLU_RS04495	0.65	+0.8
1,007,985	-		PFLU_RS04495	0.65	+1.4
1,007,985	-		PFLU_RS04495	0.65	+1.0
1,007,985	-		PFLU_RS04495	0.65	+0.0
1,008,115	+				+2.7
1,008,116	-				+0.8
1,008,150	+				-1.9
1,008,150	+				-0.7
1,008,150	+				+2.1
1,008,150	+				+0.2
1,008,150	+				+1.0
1,008,150	+				+0.8
1,008,150	+				-2.2
1,008,150	+				+0.3
1,008,150	+				-3.1
1,008,150	+				-1.1
1,008,150	+				+0.2
1,008,151	-				-3.0
1,008,151	-				-2.8
1,008,151	-				+2.2
1,008,151	-				+3.1
1,008,151	-				-0.5
1,008,151	-				+1.0
1,008,151	-				+0.6
1,008,233	-		PFLU_RS04500	0.10	+2.1
1,008,342	+		PFLU_RS04500	0.33	+0.3
1,008,342	+		PFLU_RS04500	0.33	-0.6
1,008,343	-		PFLU_RS04500	0.33	+1.6
1,008,507	+		PFLU_RS04500	0.67	-3.0
1,008,507	+		PFLU_RS04500	0.67	-0.5
1,008,508	-		PFLU_RS04500	0.67	+3.7
1,008,508	-		PFLU_RS04500	0.67	+0.3
1,008,508	-		PFLU_RS04500	0.67	+0.4
1,008,508	-		PFLU_RS04500	0.67	+0.5
1,008,508	-		PFLU_RS04500	0.67	+0.1
1,008,540	+		PFLU_RS04500	0.73	-0.7
1,008,540	+		PFLU_RS04500	0.73	-1.5
1,008,541	-		PFLU_RS04500	0.74	+0.5
1,008,594	+		PFLU_RS04500	0.85	-0.6
1,008,594	+		PFLU_RS04500	0.85	+0.4
1,008,594	+		PFLU_RS04500	0.85	-0.2
1,008,594	+		PFLU_RS04500	0.85	-2.8
1,008,594	+		PFLU_RS04500	0.85	+0.5
1,008,594	+		PFLU_RS04500	0.85	-1.4
1,008,594	+		PFLU_RS04500	0.85	-1.7
1,008,594	+		PFLU_RS04500	0.85	+3.5
1,008,594	+		PFLU_RS04500	0.85	+0.6
1,008,594	+		PFLU_RS04500	0.85	+1.0
1,008,594	+		PFLU_RS04500	0.85	+0.2
1,008,594	+		PFLU_RS04500	0.85	+0.8
1,008,594	+		PFLU_RS04500	0.85	+0.8
1,008,594	+		PFLU_RS04500	0.85	-0.0
1,008,594	+		PFLU_RS04500	0.85	+0.8
1,008,594	+		PFLU_RS04500	0.85	+0.6
1,008,594	+		PFLU_RS04500	0.85	-0.9
1,008,594	+		PFLU_RS04500	0.85	+0.6
1,008,594	+		PFLU_RS04500	0.85	-1.1
1,008,594	+		PFLU_RS04500	0.85	-0.0
1,008,594	+		PFLU_RS04500	0.85	-1.5
1,008,594	+		PFLU_RS04500	0.85	-0.8
1,008,594	+		PFLU_RS04500	0.85	+0.8
1,008,594	+		PFLU_RS04500	0.85	-0.7
1,008,594	+		PFLU_RS04500	0.85	-1.4
1,008,594	+		PFLU_RS04500	0.85	+1.6
1,008,594	+		PFLU_RS04500	0.85	+1.7
1,008,594	+		PFLU_RS04500	0.85	-0.2
1,008,594	+		PFLU_RS04500	0.85	+0.0
1,008,595	-		PFLU_RS04500	0.85	+0.2
1,008,595	-		PFLU_RS04500	0.85	-0.5
1,008,595	-		PFLU_RS04500	0.85	-0.5
1,008,595	-		PFLU_RS04500	0.85	-1.1
1,008,595	-		PFLU_RS04500	0.85	+0.7
1,008,595	-		PFLU_RS04500	0.85	-2.0
1,008,595	-		PFLU_RS04500	0.85	+0.2
1,008,595	-		PFLU_RS04500	0.85	+0.6
1,008,595	-		PFLU_RS04500	0.85	+0.5
1,008,595	-		PFLU_RS04500	0.85	+0.6
1,008,595	-		PFLU_RS04500	0.85	+1.2
1,008,595	-		PFLU_RS04500	0.85	+1.0
1,008,595	-		PFLU_RS04500	0.85	-1.2
1,008,595	-		PFLU_RS04500	0.85	+0.3
1,008,595	-		PFLU_RS04500	0.85	+3.3
1,008,595	-		PFLU_RS04500	0.85	+1.4
1,008,595	-		PFLU_RS04500	0.85	+0.1
1,008,595	-		PFLU_RS04500	0.85	-0.4
1,008,595	-		PFLU_RS04500	0.85	+1.0
1,008,595	-		PFLU_RS04500	0.85	-1.5
1,008,595	-		PFLU_RS04500	0.85	-0.9
1,008,595	-		PFLU_RS04500	0.85	-0.4
1,008,612	+		PFLU_RS04500	0.88	-0.7
1,008,612	+		PFLU_RS04500	0.88	+0.2
1,008,612	+		PFLU_RS04500	0.88	-0.2
1,008,612	+		PFLU_RS04500	0.88	+1.2
1,008,613	-		PFLU_RS04500	0.88	-0.2
1,008,613	-		PFLU_RS04500	0.88	-2.9
1,008,613	-		PFLU_RS04500	0.88	-2.0
1,008,626	+				-0.4
1,008,626	+				+1.4
1,008,626	+				+0.3
1,008,626	+				-1.8
1,008,626	+				+0.6
1,008,626	+				+0.7
1,008,626	+				-0.9
1,008,626	+				+0.0
1,008,627	-				+1.0
1,008,627	-				-0.6
1,008,627	-				+0.0
1,008,627	-				+0.5
1,008,627	-				+3.3
1,008,627	-				-1.5
1,008,627	-				-0.0
1,008,645	-				-0.2