Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS00250

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
48,768	+		PFLU_RS00240	0.76	+0.7
48,950	-		PFLU_RS00240	0.85	+1.0
48,972	+		PFLU_RS00240	0.86	-2.1
48,972	+		PFLU_RS00240	0.86	-0.9
48,972	+		PFLU_RS00240	0.86	+1.3
48,973	-		PFLU_RS00240	0.86	-0.4
48,973	-		PFLU_RS00240	0.86	+0.4
48,973	-		PFLU_RS00240	0.86	-0.8
49,001	+		PFLU_RS00240	0.88	-3.2
49,001	+		PFLU_RS00240	0.88	+0.4
49,002	-		PFLU_RS00240	0.88	-0.5
49,002	-		PFLU_RS00240	0.88	-1.8
49,017	+		PFLU_RS00240	0.88	+1.3
49,018	-		PFLU_RS00240	0.88	-0.1
49,029	+		PFLU_RS00240	0.89	-2.4
49,029	+		PFLU_RS00240	0.89	-2.1
49,029	+		PFLU_RS00240	0.89	+1.8
49,029	+		PFLU_RS00240	0.89	-1.8
49,030	-		PFLU_RS00240	0.89	+1.1
49,030	-		PFLU_RS00240	0.89	-0.2
49,030	-		PFLU_RS00240	0.89	+2.0
49,030	-		PFLU_RS00240	0.89	-2.3
49,032	+		PFLU_RS00240	0.89	+2.1
49,032	+		PFLU_RS00240	0.89	-2.6
49,032	+		PFLU_RS00240	0.89	-2.3
49,033	-		PFLU_RS00240	0.89	-1.2
49,033	-		PFLU_RS00240	0.89	+1.1
49,033	-		PFLU_RS00240	0.89	-3.2
49,033	-		PFLU_RS00240	0.89	-1.7
49,033	-		PFLU_RS00240	0.89	+1.2
49,033	-		PFLU_RS00240	0.89	+1.3
49,033	-		PFLU_RS00240	0.89	+0.7
49,038	+		PFLU_RS00240	0.89	-2.1
49,038	+		PFLU_RS00240	0.89	+1.2
49,038	+		PFLU_RS00240	0.89	+0.8
49,038	+		PFLU_RS00240	0.89	-0.1
49,038	+		PFLU_RS00240	0.89	-3.3
49,038	+		PFLU_RS00240	0.89	+0.1
49,038	+		PFLU_RS00240	0.89	-1.1
49,038	+		PFLU_RS00240	0.89	+1.9
49,038	+		PFLU_RS00240	0.89	+1.0
49,038	+		PFLU_RS00240	0.89	+1.7
49,038	+		PFLU_RS00240	0.89	+1.1
49,038	+		PFLU_RS00240	0.89	-1.4
49,038	+		PFLU_RS00240	0.89	+1.3
49,038	+		PFLU_RS00240	0.89	-1.9
49,038	+		PFLU_RS00240	0.89	+0.4
49,038	+		PFLU_RS00240	0.89	-0.9
49,039	-		PFLU_RS00240	0.90	+2.0
49,039	-		PFLU_RS00240	0.90	-1.3
49,039	-		PFLU_RS00240	0.90	-3.1
49,039	-		PFLU_RS00240	0.90	+3.4
49,039	-		PFLU_RS00240	0.90	-0.4
49,039	-		PFLU_RS00240	0.90	+0.4
49,039	-		PFLU_RS00240	0.90	-1.1
49,039	-		PFLU_RS00240	0.90	-0.4
49,039	-		PFLU_RS00240	0.90	-1.5
49,039	-		PFLU_RS00240	0.90	+0.4
49,039	-		PFLU_RS00240	0.90	-1.1
49,039	-		PFLU_RS00240	0.90	+0.8
49,039	-		PFLU_RS00240	0.90	+1.6
49,039	-		PFLU_RS00240	0.90	+0.3
49,039	-		PFLU_RS00240	0.90	-0.2
49,270	+				+0.4
49,285	+		PFLU_RS00245	0.13	+0.0
49,353	+		PFLU_RS00245	0.37	+2.4
49,353	+		PFLU_RS00245	0.37	+1.4
49,353	+		PFLU_RS00245	0.37	-0.1
49,353	+		PFLU_RS00245	0.37	+0.8
49,353	+		PFLU_RS00245	0.37	-1.0
49,353	+		PFLU_RS00245	0.37	-1.1
49,354	-		PFLU_RS00245	0.38	+0.2
49,354	-		PFLU_RS00245	0.38	-0.3
49,354	-		PFLU_RS00245	0.38	-0.4
49,354	-		PFLU_RS00245	0.38	-0.3
49,384	+		PFLU_RS00245	0.49	-1.7
49,384	+		PFLU_RS00245	0.49	+0.4
49,385	-		PFLU_RS00245	0.49	-0.3
49,444	+		PFLU_RS00245	0.70	+0.3
49,444	+		PFLU_RS00245	0.70	-1.4
49,444	+		PFLU_RS00245	0.70	-0.9
49,445	-		PFLU_RS00245	0.71	-0.2
49,445	-		PFLU_RS00245	0.71	+0.1
49,445	-		PFLU_RS00245	0.71	+1.7
49,445	-		PFLU_RS00245	0.71	+0.7
49,474	+		PFLU_RS00245	0.81	-2.0
49,474	+		PFLU_RS00245	0.81	-0.8
49,474	+		PFLU_RS00245	0.81	+0.6
49,474	+		PFLU_RS00245	0.81	-0.0
49,475	-		PFLU_RS00245	0.82	-1.1
49,523	+				+0.7
49,523	+				+0.8
49,523	+				-2.6
49,524	-				-0.5
49,600	+				+0.7
49,600	+				+0.3
49,600	+				+0.3
49,600	+				-1.6
49,601	-				-0.8
49,729	+		PFLU_RS00250	0.20	+0.1
49,828	+		PFLU_RS00250	0.35	-2.1
49,828	+		PFLU_RS00250	0.35	+0.4
49,828	+		PFLU_RS00250	0.35	+0.3
49,829	-		PFLU_RS00250	0.35	+0.1
49,910	+		PFLU_RS00250	0.47	-0.9
49,944	+		PFLU_RS00250	0.53	-2.6
49,944	+		PFLU_RS00250	0.53	+0.2
49,944	+		PFLU_RS00250	0.53	+0.5
49,944	+		PFLU_RS00250	0.53	-0.9
49,944	+		PFLU_RS00250	0.53	+0.9
49,944	+		PFLU_RS00250	0.53	-0.6
49,944	+		PFLU_RS00250	0.53	-1.5
49,944	+		PFLU_RS00250	0.53	-3.8
49,945	-		PFLU_RS00250	0.53	+0.1
49,945	-		PFLU_RS00250	0.53	-1.3
49,945	-		PFLU_RS00250	0.53	-0.5
49,945	-		PFLU_RS00250	0.53	+1.4
49,945	-		PFLU_RS00250	0.53	+1.0
49,945	-		PFLU_RS00250	0.53	-1.6
49,945	-		PFLU_RS00250	0.53	+1.7
49,945	-		PFLU_RS00250	0.53	+0.9
49,945	-		PFLU_RS00250	0.53	+1.1
49,945	-		PFLU_RS00250	0.53	+1.3
49,945	-		PFLU_RS00250	0.53	-1.5
49,945	-		PFLU_RS00250	0.53	+0.5
49,945	-		PFLU_RS00250	0.53	+1.3
49,961	-		PFLU_RS00250	0.55	-1.4
49,971	+		PFLU_RS00250	0.57	-3.0
49,971	+		PFLU_RS00250	0.57	-1.5
49,971	+		PFLU_RS00250	0.57	-3.1
49,972	-		PFLU_RS00250	0.57	+1.9
49,972	-		PFLU_RS00250	0.57	+0.9
49,972	-		PFLU_RS00250	0.57	+1.6
49,972	-		PFLU_RS00250	0.57	-2.0
49,972	-		PFLU_RS00250	0.57	-0.6
49,972	-		PFLU_RS00250	0.57	+0.8
49,972	-		PFLU_RS00250	0.57	+0.4
49,972	-		PFLU_RS00250	0.57	-1.2
49,972	-		PFLU_RS00250	0.57	-0.8
49,972	-		PFLU_RS00250	0.57	-3.2
49,972	-		PFLU_RS00250	0.57	-2.6
49,972	-		PFLU_RS00250	0.57	+1.1
50,096	-		PFLU_RS00250	0.76	-1.3
50,125	+		PFLU_RS00250	0.80	+0.7
50,125	+		PFLU_RS00250	0.80	+1.7
50,125	+		PFLU_RS00250	0.80	+0.3
50,125	+		PFLU_RS00250	0.80	-1.3
50,125	+		PFLU_RS00250	0.80	-0.2
50,125	+		PFLU_RS00250	0.80	+0.6
50,125	+		PFLU_RS00250	0.80	+0.2
50,126	-		PFLU_RS00250	0.80	-1.4
50,126	-		PFLU_RS00250	0.80	-0.1
50,126	-		PFLU_RS00250	0.80	+1.3
50,126	-		PFLU_RS00250	0.80	+0.3
50,126	-		PFLU_RS00250	0.80	-0.1
50,126	-		PFLU_RS00250	0.80	-0.5
50,126	-		PFLU_RS00250	0.80	-1.2
50,126	-		PFLU_RS00250	0.80	+0.1
50,126	-		PFLU_RS00250	0.80	-2.1
50,126	-		PFLU_RS00250	0.80	+0.8
50,126	-		PFLU_RS00250	0.80	+0.6
50,126	-		PFLU_RS00250	0.80	-0.2
50,126	-		PFLU_RS00250	0.80	-1.3
50,126	-		PFLU_RS00250	0.80	-0.5
50,126	-		PFLU_RS00250	0.80	-1.1
50,126	-		PFLU_RS00250	0.80	+2.0
50,191	+				-1.3
50,226	+				-0.9
50,226	+				+1.1
50,227	-				-1.1
50,227	-				+0.3
50,227	-				-2.8
50,227	-				+1.6
50,362	-				+0.3
50,381	+				+0.7
50,381	+				-0.7
50,381	+				-3.0
50,381	+				-2.9
50,381	+				+1.9
50,381	+				+1.6
50,381	+				-0.9
50,381	+				+1.8
50,382	-				-1.5
50,382	-				-0.6
50,382	-				+0.4
50,382	-				+0.4
50,398	-				+0.8
50,407	-				+1.2
50,410	+				-1.3
50,410	+				-0.4
50,410	+				+0.5
50,411	-				+1.4
50,411	-				+1.6
50,411	-				+0.2
50,411	-				+1.4
50,430	+				+2.4
50,430	+				+0.7
50,431	-				+1.0
50,431	-				+0.8
50,431	-				-0.7
50,431	-				+3.7
50,431	-				-2.8
50,498	+				-2.9
50,498	+				+2.2
50,698	-		PFLU_RS00255	0.22	-3.7
50,709	+		PFLU_RS00255	0.24	-0.8
50,709	+		PFLU_RS00255	0.24	-1.1
50,709	+		PFLU_RS00255	0.24	-0.8
50,709	+		PFLU_RS00255	0.24	+1.5
50,709	+		PFLU_RS00255	0.24	+1.5
50,710	-		PFLU_RS00255	0.24	-2.9
50,710	-		PFLU_RS00255	0.24	-0.2
50,710	-		PFLU_RS00255	0.24	-0.0
50,735	+		PFLU_RS00255	0.27	+2.0
50,735	+		PFLU_RS00255	0.27	-0.9
50,735	+		PFLU_RS00255	0.27	-1.3
50,811	+		PFLU_RS00255	0.37	+0.0
50,811	+		PFLU_RS00255	0.37	+2.4
50,811	+		PFLU_RS00255	0.37	-1.6
50,811	+		PFLU_RS00255	0.37	-1.4
50,812	-		PFLU_RS00255	0.38	+0.6
50,812	-		PFLU_RS00255	0.38	+0.0
50,812	-		PFLU_RS00255	0.38	-2.5
50,812	-		PFLU_RS00255	0.38	+1.9
50,831	+		PFLU_RS00255	0.40	+0.5
50,832	-		PFLU_RS00255	0.40	+1.7
50,832	-		PFLU_RS00255	0.40	+0.3
50,832	-		PFLU_RS00255	0.40	+0.8
50,934	+		PFLU_RS00255	0.54	+0.6
50,934	+		PFLU_RS00255	0.54	-0.9
50,934	+		PFLU_RS00255	0.54	-1.9
50,934	+		PFLU_RS00255	0.54	-0.9
50,934	+		PFLU_RS00255	0.54	+1.8
50,934	+		PFLU_RS00255	0.54	+0.2
50,934	+		PFLU_RS00255	0.54	+3.1
50,935	-		PFLU_RS00255	0.54	+0.9
50,935	-		PFLU_RS00255	0.54	+0.7
50,935	-		PFLU_RS00255	0.54	+0.0
50,942	-		PFLU_RS00255	0.55	+0.5
50,945	+		PFLU_RS00255	0.55	+0.9
50,945	+		PFLU_RS00255	0.55	-1.5
50,945	+		PFLU_RS00255	0.55	-0.3
50,945	+		PFLU_RS00255	0.55	-1.1
50,945	+		PFLU_RS00255	0.55	-0.0
50,946	-		PFLU_RS00255	0.55	+2.5
50,946	-		PFLU_RS00255	0.55	+0.7
50,946	-		PFLU_RS00255	0.55	-2.2
50,946	-		PFLU_RS00255	0.55	-0.2
51,023	+		PFLU_RS00255	0.66	+1.8
51,023	+		PFLU_RS00255	0.66	-3.0
51,023	+		PFLU_RS00255	0.66	+1.1
51,023	+		PFLU_RS00255	0.66	-0.3
51,023	+		PFLU_RS00255	0.66	-0.4
51,023	+		PFLU_RS00255	0.66	+2.2
51,023	+		PFLU_RS00255	0.66	+0.0
51,023	+		PFLU_RS00255	0.66	+1.5
51,023	+		PFLU_RS00255	0.66	-0.8
51,023	+		PFLU_RS00255	0.66	+0.8
51,023	+		PFLU_RS00255	0.66	+0.8
51,024	-		PFLU_RS00255	0.66	+0.9
51,024	-		PFLU_RS00255	0.66	+1.0
51,024	-		PFLU_RS00255	0.66	-0.2
51,024	-		PFLU_RS00255	0.66	-0.8
51,024	-		PFLU_RS00255	0.66	-2.4
51,024	-		PFLU_RS00255	0.66	-0.3
51,024	-		PFLU_RS00255	0.66	+0.3
51,024	-		PFLU_RS00255	0.66	+0.4
51,024	-		PFLU_RS00255	0.66	+0.4
51,024	-		PFLU_RS00255	0.66	-0.8
51,091	+		PFLU_RS00255	0.75	+2.3
51,091	+		PFLU_RS00255	0.75	-0.4
51,091	+		PFLU_RS00255	0.75	-0.1
51,091	+		PFLU_RS00255	0.75	+0.1
51,091	+		PFLU_RS00255	0.75	-0.8
51,092	-		PFLU_RS00255	0.75	+1.9
51,092	-		PFLU_RS00255	0.75	+1.1
51,092	-		PFLU_RS00255	0.75	+0.9