Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS00030

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
6,349	-				+0.8
6,408	+		PFLU_RS00025	0.15	+0.9
6,408	+		PFLU_RS00025	0.15	+0.8
6,409	-		PFLU_RS00025	0.15	-1.6
6,409	-		PFLU_RS00025	0.15	-0.4
6,409	-		PFLU_RS00025	0.15	+1.3
6,412	+		PFLU_RS00025	0.16	+1.1
6,412	+		PFLU_RS00025	0.16	-2.2
6,412	+		PFLU_RS00025	0.16	-0.1
6,412	+		PFLU_RS00025	0.16	+0.8
6,412	+		PFLU_RS00025	0.16	+0.0
6,412	+		PFLU_RS00025	0.16	+0.8
6,412	+		PFLU_RS00025	0.16	+2.6
6,412	+		PFLU_RS00025	0.16	-1.1
6,412	+		PFLU_RS00025	0.16	+0.7
6,412	+		PFLU_RS00025	0.16	+1.1
6,412	+		PFLU_RS00025	0.16	+2.0
6,412	+		PFLU_RS00025	0.16	-2.5
6,412	+		PFLU_RS00025	0.16	+1.0
6,412	+		PFLU_RS00025	0.16	-1.5
6,412	+		PFLU_RS00025	0.16	-0.6
6,412	+		PFLU_RS00025	0.16	-0.7
6,412	+		PFLU_RS00025	0.16	+0.9
6,412	+		PFLU_RS00025	0.16	+0.4
6,412	+		PFLU_RS00025	0.16	+2.3
6,412	+		PFLU_RS00025	0.16	-1.3
6,412	+		PFLU_RS00025	0.16	-0.8
6,412	+		PFLU_RS00025	0.16	+1.1
6,413	-		PFLU_RS00025	0.16	-0.6
6,413	-		PFLU_RS00025	0.16	+0.1
6,413	-		PFLU_RS00025	0.16	-1.2
6,413	-		PFLU_RS00025	0.16	+0.7
6,413	-		PFLU_RS00025	0.16	-0.7
6,413	-		PFLU_RS00025	0.16	+0.3
6,413	-		PFLU_RS00025	0.16	-3.7
6,413	-		PFLU_RS00025	0.16	+0.8
6,413	-		PFLU_RS00025	0.16	+1.9
6,413	-		PFLU_RS00025	0.16	-0.7
6,413	-		PFLU_RS00025	0.16	-2.3
6,413	-		PFLU_RS00025	0.16	-0.2
6,413	-		PFLU_RS00025	0.16	+0.5
6,469	-		PFLU_RS00025	0.24	+0.3
6,475	-		PFLU_RS00025	0.24	-1.1
6,475	-		PFLU_RS00025	0.24	-3.1
6,475	-		PFLU_RS00025	0.24	-0.9
6,475	-		PFLU_RS00025	0.24	-0.8
6,475	-		PFLU_RS00025	0.24	-1.2
6,550	+		PFLU_RS00025	0.35	-0.3
6,550	+		PFLU_RS00025	0.35	+0.6
6,550	+		PFLU_RS00025	0.35	-1.9
6,550	+		PFLU_RS00025	0.35	+1.3
6,551	-		PFLU_RS00025	0.35	-0.1
6,551	-		PFLU_RS00025	0.35	-2.2
6,551	-		PFLU_RS00025	0.35	+1.4
6,551	-		PFLU_RS00025	0.35	-1.5
6,551	-		PFLU_RS00025	0.35	+1.1
6,551	-		PFLU_RS00025	0.35	+0.4
6,551	-		PFLU_RS00025	0.35	-0.6
6,551	-		PFLU_RS00025	0.35	-1.1
6,614	+		PFLU_RS00025	0.44	+1.6
6,614	+		PFLU_RS00025	0.44	+0.4
6,614	+		PFLU_RS00025	0.44	-0.7
6,614	+		PFLU_RS00025	0.44	-1.1
6,614	+		PFLU_RS00025	0.44	+0.2
6,614	+		PFLU_RS00025	0.44	+2.4
6,614	+		PFLU_RS00025	0.44	-0.9
6,615	-		PFLU_RS00025	0.44	-2.7
6,615	-		PFLU_RS00025	0.44	-1.5
6,615	-		PFLU_RS00025	0.44	-0.5
6,708	+		PFLU_RS00025	0.57	-0.9
6,708	+		PFLU_RS00025	0.57	-3.1
6,709	-		PFLU_RS00025	0.57	-1.9
6,709	-		PFLU_RS00025	0.57	+1.7
6,709	-		PFLU_RS00025	0.57	-0.3
6,709	-		PFLU_RS00025	0.57	-1.3
6,709	-		PFLU_RS00025	0.57	+0.1
6,737	+		PFLU_RS00025	0.61	+0.7
6,738	-		PFLU_RS00025	0.61	+1.5
6,835	+		PFLU_RS00025	0.74	+0.7
6,835	+		PFLU_RS00025	0.74	+0.5
6,884	+		PFLU_RS00025	0.81	+0.1
6,884	+		PFLU_RS00025	0.81	+0.9
6,885	-		PFLU_RS00025	0.81	+1.3
6,885	-		PFLU_RS00025	0.81	+0.5
6,885	-		PFLU_RS00025	0.81	-1.3
6,885	-		PFLU_RS00025	0.81	-1.5
6,885	-		PFLU_RS00025	0.81	+0.2
7,008	-				+0.8
7,008	-				+0.4
7,045	+				-3.2
7,045	+				-0.5
7,045	+				-0.1
7,046	-				-0.4
7,046	-				+0.3
7,072	-				+1.4
7,172	+				-1.6
7,173	-				+0.9
7,201	+				+0.7
7,201	+				+3.0
7,201	+				+0.1
7,201	+				-0.6
7,201	+				+1.0
7,202	-				-1.3
7,202	-				-2.6
7,202	-				+1.0
7,202	-				+0.2
7,202	-				+0.9
7,211	-				+1.0
7,226	+				-0.2
7,226	+				-0.8
7,361	-				+0.1
7,413	+		PFLU_RS00030	0.11	+0.8
7,413	+		PFLU_RS00030	0.11	+1.3
7,413	+		PFLU_RS00030	0.11	-3.3
7,413	+		PFLU_RS00030	0.11	+2.6
7,413	+		PFLU_RS00030	0.11	-0.1
7,413	+		PFLU_RS00030	0.11	+0.5
7,413	+		PFLU_RS00030	0.11	-0.5
7,413	+		PFLU_RS00030	0.11	-0.1
7,413	+		PFLU_RS00030	0.11	+0.8
7,413	+		PFLU_RS00030	0.11	+0.4
7,414	-		PFLU_RS00030	0.11	+0.2
7,414	-		PFLU_RS00030	0.11	+1.4
7,414	-		PFLU_RS00030	0.11	+0.9
7,414	-		PFLU_RS00030	0.11	-0.4
7,415	+		PFLU_RS00030	0.11	+0.4
7,415	+		PFLU_RS00030	0.11	+1.1
7,415	+		PFLU_RS00030	0.11	+1.7
7,415	+		PFLU_RS00030	0.11	-0.5
7,415	+		PFLU_RS00030	0.11	-0.6
7,415	+		PFLU_RS00030	0.11	+0.4
7,416	-		PFLU_RS00030	0.12	-2.2
7,416	-		PFLU_RS00030	0.12	-0.6
7,522	+		PFLU_RS00030	0.23	-1.1
7,522	+		PFLU_RS00030	0.23	-1.5
7,529	+		PFLU_RS00030	0.24	+1.1
7,529	+		PFLU_RS00030	0.24	+1.4
7,701	+		PFLU_RS00030	0.42	-0.9
7,701	+		PFLU_RS00030	0.42	+0.0
7,701	+		PFLU_RS00030	0.42	-0.1
7,701	+		PFLU_RS00030	0.42	+1.5
7,701	+		PFLU_RS00030	0.42	-3.0
7,702	-		PFLU_RS00030	0.42	-0.1
7,702	-		PFLU_RS00030	0.42	+2.7
7,702	-		PFLU_RS00030	0.42	-1.9
7,702	-		PFLU_RS00030	0.42	+0.6
7,882	+		PFLU_RS00030	0.62	+0.1
7,888	+		PFLU_RS00030	0.62	-2.9
7,889	-		PFLU_RS00030	0.62	-0.3
7,945	+		PFLU_RS00030	0.68	+0.6
8,010	+		PFLU_RS00030	0.75	-1.0
8,010	+		PFLU_RS00030	0.75	+0.4
8,040	+		PFLU_RS00030	0.78	+0.7
8,072	+		PFLU_RS00030	0.82	-0.5
8,072	+		PFLU_RS00030	0.82	+0.2
8,072	+		PFLU_RS00030	0.82	+0.5
8,072	+		PFLU_RS00030	0.82	+1.8
8,078	+		PFLU_RS00030	0.83	+1.7
8,078	+		PFLU_RS00030	0.83	+1.6
8,079	-		PFLU_RS00030	0.83	-0.7
8,142	+		PFLU_RS00030	0.89	-1.8
8,142	+		PFLU_RS00030	0.89	-2.8
8,142	+		PFLU_RS00030	0.89	-2.1
8,142	+		PFLU_RS00030	0.89	-3.2
8,143	-		PFLU_RS00030	0.89	-1.1
8,143	-		PFLU_RS00030	0.89	+0.7
8,143	-		PFLU_RS00030	0.89	+2.4
8,143	-		PFLU_RS00030	0.89	+0.9
8,163	+				-0.7
8,163	+				-2.3
8,163	+				+0.0
8,163	+				-1.9
8,199	+				+0.4
8,199	+				+0.1
8,199	+				-0.0
8,199	+				-2.5
8,199	+				+0.1
8,199	+				+1.0
8,200	-				+1.0
8,200	-				-1.1
8,200	-				-0.2
8,200	-				-1.8
8,200	-				+1.1
8,200	-				-0.9
8,200	-				+1.6
8,211	+				+0.7
8,211	+				+2.0
8,211	+				+0.8
8,212	-				-0.2
8,212	-				+0.1
8,212	-				-3.3
8,212	-				+0.7
8,212	-				-1.6
8,212	-				+0.9
8,212	-				-0.4
8,212	-				-1.3
8,212	-				+1.3
8,212	-				-0.6
8,212	-				-2.4
8,212	-				-2.1
8,215	-				+0.5
8,222	+				-0.8
8,222	+				+1.4
8,223	-				-2.5
8,223	-				-2.1
8,243	+				-2.5
8,243	+				-1.3
8,243	+				-0.9
8,243	+				-1.3
8,243	+				-1.1
8,243	+				+1.2
8,243	+				-1.1
8,243	+				+0.4
8,243	+				-2.3
8,243	+				-1.3
8,243	+				-0.3
8,243	+				-1.8
8,243	+				+1.6
8,243	+				-0.3
8,243	+				-2.0
8,243	+				+0.2
8,244	-				+0.6
8,244	-				-1.4
8,244	-				+0.3
8,244	-				+0.9
8,244	-				+3.6
8,244	-				+0.1
8,244	-				-0.7
8,244	-				+1.3
8,244	-				-1.7
8,244	-				-1.1
8,244	-				-0.8
8,244	-				-3.0
8,244	-				+0.3
8,244	-				+0.7
8,244	-				-1.3
8,244	-				-2.7
8,244	-				-1.2
8,244	-				-1.9
8,244	-				+0.2
8,359	-				-1.2
8,359	-				-1.3
8,391	-				+3.6
8,400	+				-3.3
8,400	+				-0.6
8,400	+				-0.4
8,400	+				+1.5
8,401	-				+0.1
8,401	-				-1.1
8,434	+				+0.1
8,435	-				-0.2
8,680	-		PFLU_RS00035	0.19	-2.0
8,714	+		PFLU_RS00035	0.21	+1.3
8,714	+		PFLU_RS00035	0.21	-2.8
8,714	+		PFLU_RS00035	0.21	+1.4
8,714	+		PFLU_RS00035	0.21	-0.4
8,714	+		PFLU_RS00035	0.21	-1.4
8,715	-		PFLU_RS00035	0.21	-2.0
8,715	-		PFLU_RS00035	0.21	+0.7
8,715	-		PFLU_RS00035	0.21	+2.8
8,715	-		PFLU_RS00035	0.21	+1.5
8,715	-		PFLU_RS00035	0.21	+0.5
8,715	-		PFLU_RS00035	0.21	+1.1
8,715	-		PFLU_RS00035	0.21	-0.5
8,731	+		PFLU_RS00035	0.21	-1.6
8,731	+		PFLU_RS00035	0.21	+0.7
8,731	+		PFLU_RS00035	0.21	+2.2
8,731	+		PFLU_RS00035	0.21	-1.1
8,731	+		PFLU_RS00035	0.21	+1.0
8,732	-		PFLU_RS00035	0.21	+2.0
8,732	-		PFLU_RS00035	0.21	-0.3
8,738	+		PFLU_RS00035	0.22	+0.4
8,738	+		PFLU_RS00035	0.22	-0.2
8,738	+		PFLU_RS00035	0.22	-0.8
8,738	+		PFLU_RS00035	0.22	+0.7
8,738	+		PFLU_RS00035	0.22	+0.8
8,738	+		PFLU_RS00035	0.22	+1.3
8,738	+		PFLU_RS00035	0.22	+3.1
8,739	-		PFLU_RS00035	0.22	-0.4
8,739	-		PFLU_RS00035	0.22	-0.5
8,739	-		PFLU_RS00035	0.22	-1.0
8,739	-		PFLU_RS00035	0.22	-1.5
8,739	-		PFLU_RS00035	0.22	+0.0
8,774	+		PFLU_RS00035	0.23	+1.7
8,774	+		PFLU_RS00035	0.23	-3.3
8,775	-		PFLU_RS00035	0.23	-1.4
8,784	-		PFLU_RS00035	0.24	+0.4
8,836	-		PFLU_RS00035	0.26	+0.0
8,854	+		PFLU_RS00035	0.27	+2.3
8,943	-		PFLU_RS00035	0.31	+0.8
8,964	+		PFLU_RS00035	0.32	+0.4
8,964	+		PFLU_RS00035	0.32	-1.6
8,964	+		PFLU_RS00035	0.32	+0.6
8,964	+		PFLU_RS00035	0.32	-0.7
8,964	+		PFLU_RS00035	0.32	-1.4
8,964	+		PFLU_RS00035	0.32	-0.7
8,965	-		PFLU_RS00035	0.32	-0.3
8,965	-		PFLU_RS00035	0.32	-1.1
8,965	-		PFLU_RS00035	0.32	+1.4
8,965	-		PFLU_RS00035	0.32	+1.7
8,974	+		PFLU_RS00035	0.32	-0.2
8,974	+		PFLU_RS00035	0.32	+0.8
8,975	-		PFLU_RS00035	0.32	+0.6
8,989	+		PFLU_RS00035	0.33	-0.0
8,989	+		PFLU_RS00035	0.33	+0.6
8,989	+		PFLU_RS00035	0.33	-0.7
8,990	-		PFLU_RS00035	0.33	+0.7
8,990	-		PFLU_RS00035	0.33	-0.2
8,990	-		PFLU_RS00035	0.33	-2.5
9,222	+		PFLU_RS00035	0.43	-0.2
9,234	+		PFLU_RS00035	0.43	+1.2