Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_20770 and OH686_20775 are separated by 105 nucleotides OH686_20775 and OH686_20780 are separated by 28 nucleotides OH686_20780 and OH686_20785 are separated by 192 nucleotides OH686_20785 and OH686_20790 are separated by 1 nucleotides
OH686_20770: OH686_20770 - hypothetical protein, at 4,249,072 to 4,249,509
_20770
OH686_20775: OH686_20775 - Two-component transcriptional response regulator, LuxR family, at 4,249,615 to 4,250,292
_20775
OH686_20780: OH686_20780 - hypothetical protein, at 4,250,321 to 4,250,746
_20780
OH686_20785: OH686_20785 - YciL protein, at 4,250,939 to 4,251,238
_20785
OH686_20790: OH686_20790 - intracellular septation protein A, at 4,251,240 to 4,251,869
_20790
Position (kb)
4250
4251 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4249.560 kb on - strand at 4249.560 kb on - strand at 4249.594 kb on + strand at 4249.595 kb on - strand at 4249.625 kb on + strand at 4249.625 kb on + strand at 4249.625 kb on + strand at 4249.625 kb on + strand at 4249.626 kb on - strand at 4249.626 kb on - strand at 4249.626 kb on - strand at 4249.628 kb on + strand at 4249.628 kb on + strand at 4249.628 kb on + strand at 4249.628 kb on + strand at 4249.628 kb on + strand at 4249.628 kb on + strand at 4249.628 kb on + strand at 4249.628 kb on + strand at 4249.628 kb on + strand at 4249.628 kb on + strand at 4249.629 kb on - strand at 4249.629 kb on - strand at 4249.629 kb on - strand at 4249.629 kb on - strand at 4249.629 kb on - strand at 4249.631 kb on + strand at 4249.731 kb on - strand, within OH686_20775 at 4249.731 kb on - strand, within OH686_20775 at 4249.731 kb on - strand, within OH686_20775 at 4249.886 kb on + strand, within OH686_20775 at 4249.886 kb on + strand, within OH686_20775 at 4249.886 kb on + strand, within OH686_20775 at 4249.886 kb on + strand, within OH686_20775 at 4249.886 kb on + strand, within OH686_20775 at 4249.887 kb on - strand, within OH686_20775 at 4249.887 kb on - strand, within OH686_20775 at 4249.997 kb on + strand, within OH686_20775 at 4249.997 kb on + strand, within OH686_20775 at 4249.997 kb on + strand, within OH686_20775 at 4249.997 kb on + strand, within OH686_20775 at 4249.997 kb on + strand, within OH686_20775 at 4249.997 kb on + strand, within OH686_20775 at 4249.997 kb on + strand, within OH686_20775 at 4249.998 kb on - strand, within OH686_20775 at 4249.998 kb on - strand, within OH686_20775 at 4249.998 kb on - strand, within OH686_20775 at 4250.377 kb on + strand, within OH686_20780 at 4250.378 kb on - strand, within OH686_20780 at 4250.727 kb on + strand at 4250.727 kb on + strand at 4250.727 kb on + strand at 4250.728 kb on - strand at 4250.728 kb on - strand at 4250.728 kb on - strand at 4250.728 kb on - strand at 4250.728 kb on - strand at 4250.768 kb on + strand at 4250.768 kb on + strand at 4250.768 kb on + strand at 4250.768 kb on + strand at 4250.768 kb on + strand at 4250.768 kb on + strand at 4250.768 kb on + strand at 4250.768 kb on + strand at 4250.768 kb on + strand at 4250.769 kb on - strand at 4250.769 kb on - strand at 4250.769 kb on - strand at 4250.769 kb on - strand at 4250.769 kb on - strand at 4250.769 kb on - strand at 4250.769 kb on - strand at 4250.769 kb on - strand at 4250.769 kb on - strand at 4250.769 kb on - strand at 4250.769 kb on - strand at 4250.769 kb on - strand at 4250.769 kb on - strand at 4250.805 kb on + strand at 4250.805 kb on + strand at 4250.806 kb on - strand at 4250.820 kb on + strand at 4250.820 kb on + strand at 4250.820 kb on + strand at 4250.821 kb on - strand at 4250.821 kb on - strand at 4250.821 kb on - strand at 4250.821 kb on - strand at 4250.821 kb on - strand at 4250.860 kb on + strand at 4250.860 kb on + strand at 4250.861 kb on - strand at 4250.869 kb on + strand at 4250.869 kb on + strand at 4250.869 kb on + strand at 4250.869 kb on + strand at 4250.869 kb on + strand at 4250.869 kb on + strand at 4250.870 kb on - strand at 4250.870 kb on - strand at 4250.924 kb on + strand at 4250.924 kb on + strand at 4250.924 kb on + strand at 4250.924 kb on + strand at 4250.924 kb on + strand at 4250.925 kb on - strand at 4250.982 kb on + strand, within OH686_20785 at 4250.983 kb on - strand, within OH686_20785 at 4251.231 kb on + strand at 4251.231 kb on + strand at 4251.231 kb on + strand at 4251.231 kb on + strand at 4251.231 kb on + strand at 4251.232 kb on - strand at 4251.232 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 4,249,560 - -0.4 4,249,560 - +0.2 4,249,594 + +0.7 4,249,595 - -0.8 4,249,625 + +1.9 4,249,625 + +1.4 4,249,625 + +1.6 4,249,625 + -0.8 4,249,626 - +1.6 4,249,626 - -2.7 4,249,626 - +1.3 4,249,628 + +2.2 4,249,628 + +0.4 4,249,628 + +0.7 4,249,628 + -0.6 4,249,628 + -3.6 4,249,628 + +0.5 4,249,628 + +0.3 4,249,628 + +0.7 4,249,628 + +0.1 4,249,628 + +0.1 4,249,629 - -0.4 4,249,629 - +1.0 4,249,629 - -0.9 4,249,629 - -0.4 4,249,629 - -0.2 4,249,631 + +1.1 4,249,731 - OH686_20775 0.17 +1.0 4,249,731 - OH686_20775 0.17 -2.3 4,249,731 - OH686_20775 0.17 +2.0 4,249,886 + OH686_20775 0.40 +0.5 4,249,886 + OH686_20775 0.40 +0.0 4,249,886 + OH686_20775 0.40 -0.4 4,249,886 + OH686_20775 0.40 +0.8 4,249,886 + OH686_20775 0.40 -2.2 4,249,887 - OH686_20775 0.40 -1.5 4,249,887 - OH686_20775 0.40 +0.0 4,249,997 + OH686_20775 0.56 +0.6 4,249,997 + OH686_20775 0.56 +0.6 4,249,997 + OH686_20775 0.56 -0.5 4,249,997 + OH686_20775 0.56 +1.4 4,249,997 + OH686_20775 0.56 -0.3 4,249,997 + OH686_20775 0.56 +1.3 4,249,997 + OH686_20775 0.56 +0.3 4,249,998 - OH686_20775 0.56 +2.4 4,249,998 - OH686_20775 0.56 -1.6 4,249,998 - OH686_20775 0.56 -1.2 4,250,377 + OH686_20780 0.13 -1.0 4,250,378 - OH686_20780 0.13 +0.1 4,250,727 + +0.2 4,250,727 + +0.7 4,250,727 + -2.3 4,250,728 - +1.7 4,250,728 - -0.0 4,250,728 - -0.4 4,250,728 - +1.4 4,250,728 - +0.0 4,250,768 + -1.0 4,250,768 + +1.6 4,250,768 + -1.1 4,250,768 + +0.1 4,250,768 + -0.7 4,250,768 + +1.3 4,250,768 + +0.9 4,250,768 + +0.9 4,250,768 + -0.2 4,250,769 - -0.8 4,250,769 - -1.5 4,250,769 - -0.9 4,250,769 - -0.9 4,250,769 - +0.7 4,250,769 - -1.8 4,250,769 - +0.3 4,250,769 - +1.2 4,250,769 - +1.0 4,250,769 - -1.5 4,250,769 - -1.3 4,250,769 - +0.8 4,250,769 - +1.2 4,250,805 + -1.1 4,250,805 + -0.8 4,250,806 - -0.2 4,250,820 + -1.1 4,250,820 + -1.3 4,250,820 + -0.0 4,250,821 - -0.0 4,250,821 - +1.3 4,250,821 - +0.4 4,250,821 - +0.8 4,250,821 - +1.3 4,250,860 + -0.5 4,250,860 + -0.4 4,250,861 - +0.9 4,250,869 + -0.3 4,250,869 + +1.5 4,250,869 + +0.2 4,250,869 + -1.0 4,250,869 + +1.0 4,250,869 + -0.3 4,250,870 - +1.4 4,250,870 - +0.4 4,250,924 + +0.2 4,250,924 + -0.1 4,250,924 + -1.0 4,250,924 + -0.4 4,250,924 + +0.1 4,250,925 - +0.8 4,250,982 + OH686_20785 0.14 +0.2 4,250,983 - OH686_20785 0.15 -1.4 4,251,231 + -0.1 4,251,231 + +1.1 4,251,231 + +0.2 4,251,231 + +1.1 4,251,231 + +1.3 4,251,232 - -0.6 4,251,232 - -0.8
Or see this region's nucleotide sequence