Strain Fitness in Pseudomonas sp. S08-1 around OH686_05830

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
1,176,090	+		OH686_05820	0.69	-0.4
1,176,090	+		OH686_05820	0.69	-2.4
1,176,091	-		OH686_05820	0.69	-0.8
1,176,174	+		OH686_05820	0.81	+0.1
1,176,174	+		OH686_05820	0.81	+1.5
1,176,175	-		OH686_05820	0.81	+1.7
1,176,175	-		OH686_05820	0.81	-2.5
1,176,175	-		OH686_05820	0.81	+0.5
1,176,231	+		OH686_05820	0.89	-3.7
1,176,231	+		OH686_05820	0.89	-0.4
1,176,231	+		OH686_05820	0.89	+0.3
1,176,232	-		OH686_05820	0.90	+0.4
1,176,232	-		OH686_05820	0.90	-0.8
1,176,232	-		OH686_05820	0.90	-1.3
1,176,232	-		OH686_05820	0.90	-0.6
1,176,232	-		OH686_05820	0.90	-0.0
1,176,232	-		OH686_05820	0.90	-1.4
1,176,232	-		OH686_05820	0.90	+0.1
1,176,696	+		OH686_05825	0.37	-0.0
1,176,696	+		OH686_05825	0.37	-0.1
1,176,696	+		OH686_05825	0.37	+0.4
1,176,696	+		OH686_05825	0.37	-0.5
1,176,696	+		OH686_05825	0.37	-0.1
1,176,696	+		OH686_05825	0.37	-0.2
1,176,697	-		OH686_05825	0.37	-1.5
1,176,697	-		OH686_05825	0.37	+0.2
1,176,697	-		OH686_05825	0.37	-1.1
1,176,697	-		OH686_05825	0.37	+0.3
1,176,713	+		OH686_05825	0.41	+0.1
1,176,713	+		OH686_05825	0.41	+0.4
1,176,713	+		OH686_05825	0.41	-2.7
1,176,713	+		OH686_05825	0.41	+1.7
1,176,713	+		OH686_05825	0.41	-2.4
1,176,713	+		OH686_05825	0.41	+0.5
1,176,714	-		OH686_05825	0.41	-1.6
1,176,714	-		OH686_05825	0.41	-2.4
1,176,714	-		OH686_05825	0.41	-0.2
1,176,714	-		OH686_05825	0.41	+0.6
1,176,714	-		OH686_05825	0.41	-1.7
1,176,714	-		OH686_05825	0.41	-1.2
1,176,714	-		OH686_05825	0.41	+0.3
1,176,714	-		OH686_05825	0.41	-0.4
1,176,803	+		OH686_05825	0.61	+1.4
1,176,804	-		OH686_05825	0.62	-0.1
1,176,804	-		OH686_05825	0.62	+1.2
1,176,804	-		OH686_05825	0.62	-0.1
1,176,804	-		OH686_05825	0.62	+2.2
1,176,864	+		OH686_05825	0.75	+1.1
1,176,865	-		OH686_05825	0.76	-2.1
1,176,865	-		OH686_05825	0.76	-1.9
1,176,865	-		OH686_05825	0.76	+0.6
1,177,016	+				+0.9
1,177,017	-				+0.8
1,177,230	+		OH686_05830	0.21	-0.1
1,177,230	+		OH686_05830	0.21	-2.0
1,177,231	-		OH686_05830	0.21	-0.4
1,177,231	-		OH686_05830	0.21	+0.8
1,177,231	-		OH686_05830	0.21	-1.4
1,177,434	+		OH686_05830	0.45	+1.0
1,177,434	+		OH686_05830	0.45	+0.5
1,177,615	+		OH686_05830	0.67	-1.3
1,177,616	-		OH686_05830	0.67	+0.3
1,178,286	+		OH686_05835	0.70	-0.0
1,178,287	-		OH686_05835	0.70	-0.9
1,178,287	-		OH686_05835	0.70	-0.6
1,178,287	-		OH686_05835	0.70	-1.9
1,178,337	+		OH686_05835	0.79	+0.8
1,178,337	+		OH686_05835	0.79	-2.4
1,178,337	+		OH686_05835	0.79	-0.0
1,178,338	-		OH686_05835	0.79	-1.1
1,178,455	+				-0.6
1,178,455	+				-2.9
1,178,455	+				-1.5
1,178,455	+				+1.5
1,178,455	+				-0.6
1,178,455	+				-0.2
1,178,455	+				-0.8
1,178,455	+				+1.4
1,178,455	+				-2.0
1,178,455	+				-1.2
1,178,455	+				+0.5
1,178,455	+				+2.0
1,178,455	+				+1.0
1,178,455	+				+0.9
1,178,455	+				-2.7
1,178,455	+				-0.3
1,178,455	+				-0.5
1,178,455	+				+1.5
1,178,455	+				-0.7
1,178,455	+				+0.8
1,178,455	+				+0.2
1,178,455	+				-1.7
1,178,455	+				+0.6
1,178,455	+				+3.1
1,178,455	+				+1.0
1,178,456	-				-2.1
1,178,456	-				-1.2
1,178,456	-				+3.0
1,178,456	-				-1.7
1,178,456	-				-0.3
1,178,456	-				+0.1
1,178,456	-				-0.4
1,178,456	-				-1.2
1,178,456	-				+0.5
1,178,456	-				-1.2
1,178,456	-				+1.4
1,178,456	-				-1.4
1,178,456	-				+0.7
1,178,456	-				+1.1
1,178,456	-				-2.0
1,178,456	-				-0.4
1,178,456	-				+0.2
1,178,456	-				+0.6
1,178,456	-				+2.6
1,178,456	-				-0.3
1,178,456	-				+0.4
1,178,456	-				+0.3
1,178,456	-				+0.4
1,178,456	-				-0.4
1,178,456	-				-0.5
1,178,456	-				-0.9
1,178,457	+				+0.9
1,178,457	+				+0.6
1,178,457	+				+1.3
1,178,457	+				+0.7
1,178,457	+				+0.5
1,178,457	+				+0.4
1,178,457	+				-2.0
1,178,457	+				+2.8
1,178,457	+				-2.9
1,178,457	+				+1.0
1,178,457	+				+0.7
1,178,457	+				+0.3
1,178,457	+				+0.4
1,178,457	+				+0.8
1,178,457	+				-2.3
1,178,457	+				+1.5
1,178,458	-				+1.4
1,178,458	-				-1.2
1,178,458	-				+3.3
1,178,458	-				+0.1
1,178,458	-				-0.1
1,178,458	-				+1.0
1,178,458	-				-0.3
1,178,458	-				+0.4
1,178,458	-				-1.2
1,178,458	-				+0.4
1,178,458	-				-2.7
1,178,518	+				+0.1
1,178,519	-				-0.9
1,178,589	+				-0.5
1,178,589	+				-0.3
1,178,589	+				-0.9
1,178,589	+				-1.7
1,178,589	+				+1.9
1,178,589	+				-0.6
1,178,589	+				-0.7
1,178,590	-				+0.8
1,178,590	-				+0.9
1,178,590	-				-3.1
1,178,590	-				-1.9
1,178,590	-				-2.3
1,178,590	-				+1.0
1,178,590	-				+0.5
1,178,590	-				+0.2
1,178,758	+		OH686_05840	0.81	+0.4
1,178,758	+		OH686_05840	0.81	-1.0
1,178,758	+		OH686_05840	0.81	-0.9
1,178,759	-		OH686_05840	0.81	+0.8
1,178,799	+				+0.6
1,178,799	+				-2.0
1,178,799	+				+1.4
1,178,799	+				-0.0
1,178,799	+				+0.7
1,178,800	-				-2.0
1,178,800	-				+1.5
1,178,800	-				-0.9
1,178,800	-				+0.5
1,178,800	-				+0.9
1,178,800	-				+0.1