Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_01030 and OH686_01035 are separated by 126 nucleotides OH686_01035 and OH686_01040 overlap by 1 nucleotides OH686_01040 and OH686_01045 are separated by 23 nucleotides
OH686_01030: OH686_01030 - ABC-type siderophore export system, fused ATPase and permease components, at 215,410 to 217,080
_01030
OH686_01035: OH686_01035 - MbtH-like NRPS chaperone, at 217,207 to 217,410
_01035
OH686_01040: OH686_01040 - hypothetical protein, at 217,410 to 218,135
_01040
OH686_01045: OH686_01045 - Polyketide synthase modules-related protein, at 218,159 to 229,021
_01045
Position (kb) 217
218
219 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 217.103 kb on + strand at 217.103 kb on + strand at 217.104 kb on - strand at 217.104 kb on - strand at 217.143 kb on - strand at 217.175 kb on + strand at 217.175 kb on + strand at 217.176 kb on - strand at 217.176 kb on - strand at 217.192 kb on + strand at 217.192 kb on + strand at 217.192 kb on + strand at 217.193 kb on - strand at 217.193 kb on - strand at 217.201 kb on + strand at 217.264 kb on + strand, within OH686_01035 at 217.264 kb on + strand, within OH686_01035 at 217.265 kb on - strand, within OH686_01035 at 217.265 kb on - strand, within OH686_01035 at 217.265 kb on - strand, within OH686_01035 at 217.282 kb on + strand, within OH686_01035 at 217.282 kb on + strand, within OH686_01035 at 217.282 kb on + strand, within OH686_01035 at 217.282 kb on + strand, within OH686_01035 at 217.282 kb on + strand, within OH686_01035 at 217.283 kb on - strand, within OH686_01035 at 217.283 kb on - strand, within OH686_01035 at 217.283 kb on - strand, within OH686_01035 at 217.455 kb on + strand at 217.456 kb on - strand at 217.456 kb on - strand at 217.456 kb on - strand at 217.456 kb on - strand at 217.456 kb on - strand at 217.544 kb on - strand, within OH686_01040 at 217.544 kb on - strand, within OH686_01040 at 217.611 kb on + strand, within OH686_01040 at 218.037 kb on + strand, within OH686_01040 at 218.037 kb on + strand, within OH686_01040 at 218.037 kb on + strand, within OH686_01040 at 218.038 kb on - strand, within OH686_01040 at 218.038 kb on - strand, within OH686_01040 at 218.038 kb on - strand, within OH686_01040 at 218.038 kb on - strand, within OH686_01040 at 218.038 kb on - strand, within OH686_01040 at 218.133 kb on + strand at 218.133 kb on + strand at 218.264 kb on + strand at 218.265 kb on - strand at 218.265 kb on - strand at 218.265 kb on - strand at 218.265 kb on - strand at 218.265 kb on - strand at 218.265 kb on - strand at 218.339 kb on + strand at 218.339 kb on + strand at 218.339 kb on + strand at 218.339 kb on + strand at 218.340 kb on - strand at 218.340 kb on - strand at 218.340 kb on - strand at 218.340 kb on - strand at 218.340 kb on - strand at 218.340 kb on - strand at 218.498 kb on + strand at 218.499 kb on - strand at 218.538 kb on - strand at 218.639 kb on + strand at 218.639 kb on + strand at 218.640 kb on - strand at 218.693 kb on + strand at 218.693 kb on + strand at 218.693 kb on + strand at 218.694 kb on - strand at 218.694 kb on - strand at 218.694 kb on - strand at 218.702 kb on + strand at 218.702 kb on + strand at 218.702 kb on + strand at 218.703 kb on - strand at 218.703 kb on - strand at 218.703 kb on - strand at 218.703 kb on - strand at 218.703 kb on - strand at 218.703 kb on - strand at 218.703 kb on - strand at 218.703 kb on - strand at 218.850 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 217,103 + -2.5 217,103 + +0.8 217,104 - +0.2 217,104 - -0.3 217,143 - -0.5 217,175 + -1.4 217,175 + -0.4 217,176 - -2.2 217,176 - -1.2 217,192 + +0.5 217,192 + -2.3 217,192 + -0.4 217,193 - -0.3 217,193 - -0.6 217,201 + +0.7 217,264 + OH686_01035 0.28 +0.2 217,264 + OH686_01035 0.28 -1.0 217,265 - OH686_01035 0.28 +1.2 217,265 - OH686_01035 0.28 -0.1 217,265 - OH686_01035 0.28 +2.0 217,282 + OH686_01035 0.37 -0.2 217,282 + OH686_01035 0.37 -2.0 217,282 + OH686_01035 0.37 -1.0 217,282 + OH686_01035 0.37 -0.8 217,282 + OH686_01035 0.37 +1.7 217,283 - OH686_01035 0.37 -3.2 217,283 - OH686_01035 0.37 -1.2 217,283 - OH686_01035 0.37 +0.8 217,455 + +0.3 217,456 - +2.1 217,456 - -0.5 217,456 - +1.1 217,456 - +2.2 217,456 - +0.6 217,544 - OH686_01040 0.18 -1.9 217,544 - OH686_01040 0.18 -0.2 217,611 + OH686_01040 0.28 -1.5 218,037 + OH686_01040 0.86 -2.8 218,037 + OH686_01040 0.86 -0.6 218,037 + OH686_01040 0.86 +0.1 218,038 - OH686_01040 0.87 +0.5 218,038 - OH686_01040 0.87 -1.0 218,038 - OH686_01040 0.87 +0.4 218,038 - OH686_01040 0.87 -0.4 218,038 - OH686_01040 0.87 -1.0 218,133 + -0.5 218,133 + -2.1 218,264 + -3.4 218,265 - -0.5 218,265 - -0.8 218,265 - -0.5 218,265 - -1.3 218,265 - -1.4 218,265 - -0.6 218,339 + +0.2 218,339 + +2.9 218,339 + -0.6 218,339 + -1.9 218,340 - +0.9 218,340 - +0.9 218,340 - -1.3 218,340 - +0.9 218,340 - -0.2 218,340 - -1.3 218,498 + +0.3 218,499 - +0.7 218,538 - +0.8 218,639 + -1.2 218,639 + +0.1 218,640 - +1.0 218,693 + +1.1 218,693 + -4.1 218,693 + +0.0 218,694 - +0.8 218,694 - +0.0 218,694 - -0.4 218,702 + -2.6 218,702 + +0.3 218,702 + -0.2 218,703 - -1.4 218,703 - +0.2 218,703 - -0.2 218,703 - -2.2 218,703 - +0.8 218,703 - +0.8 218,703 - -2.2 218,703 - +0.6 218,850 - +0.3
Or see this region's nucleotide sequence