Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS29525 and ABIE40_RS29530 are separated by 787 nucleotides ABIE40_RS29530 and ABIE40_RS29535 overlap by 74 nucleotides ABIE40_RS29535 and ABIE40_RS29540 are separated by 73 nucleotides
ABIE40_RS29525: ABIE40_RS29525 - DNA ligase D, at 596,677 to 599,340
_RS29525
ABIE40_RS29530: ABIE40_RS29530 - hypothetical protein, at 600,128 to 600,865
_RS29530
ABIE40_RS29535: ABIE40_RS29535 - cupin domain-containing protein, at 600,792 to 601,145
_RS29535
ABIE40_RS29540: ABIE40_RS29540 - hypothetical protein, at 601,219 to 601,554
_RS29540
Position (kb) 600
601 Strain fitness (log2 ratio) -2
-1
0
1
2 at 599.201 kb on + strand at 599.201 kb on + strand at 599.201 kb on + strand at 599.202 kb on - strand at 599.202 kb on - strand at 599.202 kb on - strand at 599.202 kb on - strand at 599.202 kb on - strand at 599.202 kb on - strand at 599.522 kb on + strand at 599.523 kb on - strand at 599.523 kb on - strand at 599.523 kb on - strand at 599.523 kb on - strand at 599.653 kb on + strand at 599.673 kb on + strand at 599.673 kb on + strand at 599.673 kb on + strand at 599.673 kb on + strand at 599.674 kb on - strand at 599.733 kb on + strand at 599.733 kb on + strand at 599.733 kb on + strand at 599.734 kb on - strand at 599.841 kb on + strand at 599.887 kb on - strand at 599.887 kb on - strand at 599.887 kb on - strand at 599.946 kb on + strand at 599.947 kb on - strand at 599.947 kb on - strand at 599.947 kb on - strand at 599.947 kb on - strand at 600.011 kb on + strand at 600.011 kb on + strand at 600.011 kb on + strand at 600.011 kb on + strand at 600.011 kb on + strand at 600.012 kb on - strand at 600.012 kb on - strand at 600.047 kb on + strand at 600.059 kb on - strand at 600.084 kb on + strand at 600.084 kb on + strand at 600.099 kb on + strand at 600.099 kb on + strand at 600.099 kb on + strand at 600.244 kb on + strand, within ABIE40_RS29530 at 600.245 kb on - strand, within ABIE40_RS29530 at 600.321 kb on + strand, within ABIE40_RS29530 at 600.321 kb on + strand, within ABIE40_RS29530 at 600.322 kb on - strand, within ABIE40_RS29530 at 600.472 kb on + strand, within ABIE40_RS29530 at 600.543 kb on - strand, within ABIE40_RS29530 at 600.543 kb on - strand, within ABIE40_RS29530 at 600.577 kb on + strand, within ABIE40_RS29530 at 600.598 kb on + strand, within ABIE40_RS29530 at 600.598 kb on + strand, within ABIE40_RS29530 at 600.598 kb on + strand, within ABIE40_RS29530 at 600.657 kb on + strand, within ABIE40_RS29530 at 600.658 kb on - strand, within ABIE40_RS29530 at 600.658 kb on - strand, within ABIE40_RS29530 at 600.736 kb on - strand, within ABIE40_RS29530 at 600.832 kb on + strand at 600.832 kb on + strand at 600.832 kb on + strand at 600.832 kb on + strand at 600.832 kb on + strand at 600.832 kb on + strand at 600.833 kb on - strand at 600.833 kb on - strand at 600.884 kb on + strand, within ABIE40_RS29535 at 600.885 kb on - strand, within ABIE40_RS29535 at 600.892 kb on + strand, within ABIE40_RS29535 at 600.892 kb on + strand, within ABIE40_RS29535 at 600.892 kb on + strand, within ABIE40_RS29535 at 600.892 kb on + strand, within ABIE40_RS29535 at 600.892 kb on + strand, within ABIE40_RS29535 at 600.893 kb on - strand, within ABIE40_RS29535 at 600.893 kb on - strand, within ABIE40_RS29535 at 600.893 kb on - strand, within ABIE40_RS29535 at 601.025 kb on - strand, within ABIE40_RS29535 at 601.076 kb on - strand, within ABIE40_RS29535 at 601.147 kb on + strand at 601.148 kb on - strand at 601.148 kb on - strand at 601.148 kb on - strand at 601.175 kb on - strand at 601.207 kb on - strand at 601.218 kb on + strand at 601.219 kb on - strand at 601.302 kb on - strand, within ABIE40_RS29540 at 601.397 kb on - strand, within ABIE40_RS29540 at 601.512 kb on + strand, within ABIE40_RS29540 at 601.512 kb on + strand, within ABIE40_RS29540 at 601.512 kb on + strand, within ABIE40_RS29540 at 601.512 kb on + strand, within ABIE40_RS29540 at 601.513 kb on - strand, within ABIE40_RS29540 at 601.525 kb on + strand at 601.573 kb on + strand at 601.573 kb on + strand at 601.574 kb on - strand at 601.574 kb on - strand at 601.574 kb on - strand at 601.575 kb on + strand at 601.623 kb on + strand at 601.677 kb on + strand at 601.678 kb on - strand at 601.683 kb on + strand at 601.684 kb on - strand at 601.684 kb on - strand at 601.756 kb on - strand at 601.838 kb on + strand at 601.838 kb on + strand at 601.838 kb on + strand at 601.838 kb on + strand at 601.838 kb on + strand at 601.846 kb on + strand at 601.846 kb on + strand at 601.846 kb on + strand at 601.847 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 599,201 + +0.6 599,201 + -0.1 599,201 + -1.5 599,202 - -0.9 599,202 - +0.2 599,202 - -2.4 599,202 - +0.7 599,202 - +1.1 599,202 - +0.0 599,522 + +0.9 599,523 - +0.1 599,523 - -1.3 599,523 - +0.0 599,523 - +1.1 599,653 + -0.9 599,673 + -0.3 599,673 + -0.2 599,673 + +0.5 599,673 + +0.5 599,674 - +0.2 599,733 + -0.1 599,733 + -0.9 599,733 + +0.3 599,734 - -1.5 599,841 + +0.6 599,887 - -0.0 599,887 - -0.6 599,887 - +0.0 599,946 + -0.3 599,947 - -0.8 599,947 - +0.3 599,947 - -0.1 599,947 - -1.6 600,011 + +0.3 600,011 + +1.5 600,011 + +2.4 600,011 + +1.7 600,011 + -0.4 600,012 - +0.3 600,012 - +0.0 600,047 + -0.4 600,059 - +0.4 600,084 + +0.1 600,084 + -0.2 600,099 + +0.9 600,099 + +0.1 600,099 + +0.5 600,244 + ABIE40_RS29530 0.16 +0.5 600,245 - ABIE40_RS29530 0.16 +1.0 600,321 + ABIE40_RS29530 0.26 -0.9 600,321 + ABIE40_RS29530 0.26 +0.7 600,322 - ABIE40_RS29530 0.26 +0.1 600,472 + ABIE40_RS29530 0.47 +0.4 600,543 - ABIE40_RS29530 0.56 +1.3 600,543 - ABIE40_RS29530 0.56 +0.9 600,577 + ABIE40_RS29530 0.61 +0.8 600,598 + ABIE40_RS29530 0.64 -2.5 600,598 + ABIE40_RS29530 0.64 +0.6 600,598 + ABIE40_RS29530 0.64 +1.1 600,657 + ABIE40_RS29530 0.72 -2.1 600,658 - ABIE40_RS29530 0.72 +0.1 600,658 - ABIE40_RS29530 0.72 +0.8 600,736 - ABIE40_RS29530 0.82 +1.0 600,832 + -0.1 600,832 + -1.0 600,832 + -0.4 600,832 + +0.1 600,832 + -1.5 600,832 + -1.0 600,833 - +0.7 600,833 - -0.3 600,884 + ABIE40_RS29535 0.26 -1.2 600,885 - ABIE40_RS29535 0.26 -0.6 600,892 + ABIE40_RS29535 0.28 +1.9 600,892 + ABIE40_RS29535 0.28 +0.3 600,892 + ABIE40_RS29535 0.28 -0.8 600,892 + ABIE40_RS29535 0.28 +1.3 600,892 + ABIE40_RS29535 0.28 +2.4 600,893 - ABIE40_RS29535 0.29 +0.3 600,893 - ABIE40_RS29535 0.29 +0.2 600,893 - ABIE40_RS29535 0.29 -0.7 601,025 - ABIE40_RS29535 0.66 -1.2 601,076 - ABIE40_RS29535 0.80 -0.6 601,147 + +2.4 601,148 - -0.9 601,148 - +0.1 601,148 - -1.6 601,175 - -0.6 601,207 - +0.7 601,218 + +1.8 601,219 - -0.3 601,302 - ABIE40_RS29540 0.25 -0.4 601,397 - ABIE40_RS29540 0.53 +0.3 601,512 + ABIE40_RS29540 0.87 +0.2 601,512 + ABIE40_RS29540 0.87 -0.7 601,512 + ABIE40_RS29540 0.87 +0.5 601,512 + ABIE40_RS29540 0.87 -1.2 601,513 - ABIE40_RS29540 0.88 -1.0 601,525 + -0.3 601,573 + +1.0 601,573 + -0.7 601,574 - -0.3 601,574 - -0.1 601,574 - -1.2 601,575 + +0.3 601,623 + +0.2 601,677 + -1.1 601,678 - -0.4 601,683 + -0.4 601,684 - -0.2 601,684 - -1.0 601,756 - -2.0 601,838 + +0.1 601,838 + +0.3 601,838 + -0.6 601,838 + +0.6 601,838 + -1.4 601,846 + -0.6 601,846 + -0.4 601,846 + +2.1 601,847 - +1.0
Or see this region's nucleotide sequence