Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS27920 and ABIE40_RS27925 are separated by 13 nucleotides ABIE40_RS27925 and ABIE40_RS27930 are separated by 82 nucleotides ABIE40_RS27930 and ABIE40_RS27935 are separated by 358 nucleotides ABIE40_RS27935 and ABIE40_RS27940 are separated by 240 nucleotides
ABIE40_RS27920: ABIE40_RS27920 - SDR family oxidoreductase, at 295,551 to 296,261
_RS27920
ABIE40_RS27925: ABIE40_RS27925 - 4-oxalocrotonate tautomerase family protein, at 296,275 to 296,499
_RS27925
ABIE40_RS27930: ABIE40_RS27930 - nuclear transport factor 2 family protein, at 296,582 to 296,848
_RS27930
ABIE40_RS27935: ABIE40_RS27935 - hypothetical protein, at 297,207 to 297,458
_RS27935
ABIE40_RS27940: ABIE40_RS27940 - Crp/Fnr family transcriptional regulator, at 297,699 to 298,442
_RS27940
Position (kb) 296
297 Strain fitness (log2 ratio) -2
-1
0
1 at 295.825 kb on - strand, within ABIE40_RS27920 at 295.839 kb on + strand, within ABIE40_RS27920 at 296.043 kb on + strand, within ABIE40_RS27920 at 296.190 kb on + strand, within ABIE40_RS27920 at 296.190 kb on + strand, within ABIE40_RS27920 at 296.246 kb on + strand at 296.359 kb on + strand, within ABIE40_RS27925 at 296.359 kb on + strand, within ABIE40_RS27925 at 296.359 kb on + strand, within ABIE40_RS27925 at 296.359 kb on + strand, within ABIE40_RS27925 at 296.359 kb on + strand, within ABIE40_RS27925 at 296.360 kb on + strand, within ABIE40_RS27925 at 296.360 kb on - strand, within ABIE40_RS27925 at 296.360 kb on - strand, within ABIE40_RS27925 at 296.360 kb on - strand, within ABIE40_RS27925 at 296.360 kb on - strand, within ABIE40_RS27925 at 296.360 kb on - strand, within ABIE40_RS27925 at 296.484 kb on + strand at 296.484 kb on + strand at 296.484 kb on + strand at 296.484 kb on + strand at 296.485 kb on - strand at 296.541 kb on + strand at 296.541 kb on + strand at 296.542 kb on - strand at 296.542 kb on - strand at 296.542 kb on - strand at 296.542 kb on - strand at 296.603 kb on - strand at 296.746 kb on + strand, within ABIE40_RS27930 at 296.747 kb on - strand, within ABIE40_RS27930 at 296.835 kb on - strand at 296.991 kb on + strand at 296.991 kb on + strand at 296.991 kb on + strand at 296.991 kb on + strand at 296.992 kb on - strand at 297.019 kb on - strand at 297.153 kb on - strand at 297.153 kb on - strand at 297.297 kb on + strand, within ABIE40_RS27935 at 297.363 kb on - strand, within ABIE40_RS27935 at 297.363 kb on - strand, within ABIE40_RS27935 at 297.416 kb on + strand, within ABIE40_RS27935
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 295,825 - ABIE40_RS27920 0.39 +0.1 295,839 + ABIE40_RS27920 0.41 -0.4 296,043 + ABIE40_RS27920 0.69 -0.5 296,190 + ABIE40_RS27920 0.90 +1.6 296,190 + ABIE40_RS27920 0.90 -0.4 296,246 + -0.9 296,359 + ABIE40_RS27925 0.37 -1.1 296,359 + ABIE40_RS27925 0.37 +0.4 296,359 + ABIE40_RS27925 0.37 +0.3 296,359 + ABIE40_RS27925 0.37 +0.4 296,359 + ABIE40_RS27925 0.37 -1.7 296,360 + ABIE40_RS27925 0.38 +0.5 296,360 - ABIE40_RS27925 0.38 +0.6 296,360 - ABIE40_RS27925 0.38 -1.4 296,360 - ABIE40_RS27925 0.38 +1.2 296,360 - ABIE40_RS27925 0.38 +0.6 296,360 - ABIE40_RS27925 0.38 +0.8 296,484 + -0.1 296,484 + +0.9 296,484 + -1.1 296,484 + +1.0 296,485 - +0.7 296,541 + -0.2 296,541 + +1.5 296,542 - -0.2 296,542 - -1.7 296,542 - -1.2 296,542 - +0.7 296,603 - -2.0 296,746 + ABIE40_RS27930 0.61 -2.7 296,747 - ABIE40_RS27930 0.62 -0.3 296,835 - +0.5 296,991 + -0.7 296,991 + -0.9 296,991 + +0.2 296,991 + -0.8 296,992 - +0.3 297,019 - -1.0 297,153 - -0.8 297,153 - -0.5 297,297 + ABIE40_RS27935 0.36 +0.4 297,363 - ABIE40_RS27935 0.62 +1.1 297,363 - ABIE40_RS27935 0.62 -0.9 297,416 + ABIE40_RS27935 0.83 +1.3
Or see this region's nucleotide sequence