Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS27400 and ABIE40_RS27405 are separated by 556 nucleotides ABIE40_RS27405 and ABIE40_RS27410 are separated by 605 nucleotides
ABIE40_RS27400: ABIE40_RS27400 - PAS domain-containing sensor histidine kinase, at 192,340 to 194,268
_RS27400
ABIE40_RS27405: ABIE40_RS27405 - hypothetical protein, at 194,825 to 195,028
_RS27405
ABIE40_RS27410: ABIE40_RS27410 - response regulator, at 195,634 to 196,062
_RS27410
Position (kb) 194
195
196 Strain fitness (log2 ratio) -2
-1
0
1
2 at 193.941 kb on + strand, within ABIE40_RS27400 at 194.086 kb on - strand at 194.087 kb on + strand at 194.088 kb on - strand at 194.088 kb on - strand at 194.088 kb on - strand at 194.088 kb on - strand at 194.129 kb on + strand at 194.190 kb on + strand at 194.191 kb on - strand at 194.192 kb on + strand at 194.192 kb on + strand at 194.192 kb on + strand at 194.192 kb on + strand at 194.192 kb on + strand at 194.192 kb on + strand at 194.192 kb on + strand at 194.192 kb on + strand at 194.193 kb on - strand at 194.193 kb on - strand at 194.193 kb on - strand at 194.193 kb on - strand at 194.193 kb on - strand at 194.193 kb on - strand at 194.193 kb on - strand at 194.202 kb on - strand at 194.229 kb on + strand at 194.230 kb on - strand at 194.230 kb on - strand at 194.317 kb on + strand at 194.317 kb on + strand at 194.318 kb on - strand at 194.370 kb on - strand at 194.378 kb on + strand at 194.378 kb on + strand at 194.378 kb on + strand at 194.378 kb on + strand at 194.378 kb on + strand at 194.379 kb on - strand at 194.379 kb on - strand at 194.379 kb on - strand at 194.379 kb on - strand at 194.379 kb on - strand at 194.382 kb on + strand at 194.382 kb on + strand at 194.383 kb on - strand at 194.383 kb on - strand at 194.383 kb on - strand at 194.383 kb on - strand at 194.386 kb on - strand at 194.417 kb on - strand at 194.446 kb on + strand at 194.446 kb on + strand at 194.447 kb on - strand at 194.577 kb on - strand at 194.577 kb on - strand at 194.577 kb on - strand at 194.610 kb on + strand at 194.610 kb on + strand at 194.610 kb on + strand at 194.611 kb on - strand at 194.766 kb on - strand at 194.811 kb on - strand at 194.951 kb on - strand, within ABIE40_RS27405 at 194.951 kb on - strand, within ABIE40_RS27405 at 194.963 kb on - strand, within ABIE40_RS27405 at 195.108 kb on + strand at 195.109 kb on - strand at 195.109 kb on - strand at 195.133 kb on - strand at 195.133 kb on - strand at 195.133 kb on - strand at 195.238 kb on + strand at 195.238 kb on + strand at 195.239 kb on - strand at 195.296 kb on - strand at 195.296 kb on - strand at 195.311 kb on + strand at 195.319 kb on - strand at 195.351 kb on + strand at 195.352 kb on - strand at 195.420 kb on - strand at 195.555 kb on - strand at 195.621 kb on + strand at 195.622 kb on - strand at 195.622 kb on - strand at 195.718 kb on - strand, within ABIE40_RS27410 at 195.739 kb on + strand, within ABIE40_RS27410 at 195.739 kb on + strand, within ABIE40_RS27410 at 195.827 kb on + strand, within ABIE40_RS27410 at 195.827 kb on + strand, within ABIE40_RS27410 at 195.828 kb on - strand, within ABIE40_RS27410 at 195.828 kb on - strand, within ABIE40_RS27410 at 195.830 kb on + strand, within ABIE40_RS27410 at 195.830 kb on + strand, within ABIE40_RS27410 at 195.949 kb on + strand, within ABIE40_RS27410 at 195.985 kb on + strand, within ABIE40_RS27410
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 193,941 + ABIE40_RS27400 0.83 -0.0 194,086 - +0.3 194,087 + -0.1 194,088 - -0.2 194,088 - -0.1 194,088 - +1.3 194,088 - -0.6 194,129 + +0.6 194,190 + +1.3 194,191 - +0.1 194,192 + +0.3 194,192 + -1.9 194,192 + -0.7 194,192 + -0.3 194,192 + +0.7 194,192 + -0.3 194,192 + -1.3 194,192 + +1.1 194,193 - +0.6 194,193 - +2.2 194,193 - -0.4 194,193 - -1.5 194,193 - -0.0 194,193 - +2.4 194,193 - -0.1 194,202 - +0.2 194,229 + -0.4 194,230 - -0.2 194,230 - +0.6 194,317 + +0.6 194,317 + -0.1 194,318 - -0.6 194,370 - -1.8 194,378 + +2.4 194,378 + -0.9 194,378 + +2.2 194,378 + +0.3 194,378 + +0.0 194,379 - +0.1 194,379 - -0.3 194,379 - +0.4 194,379 - +0.5 194,379 - -0.3 194,382 + +0.3 194,382 + -0.8 194,383 - -0.1 194,383 - +1.7 194,383 - -0.6 194,383 - +0.2 194,386 - +2.4 194,417 - +1.0 194,446 + +0.2 194,446 + +0.1 194,447 - +1.3 194,577 - -1.7 194,577 - -0.1 194,577 - +0.4 194,610 + -0.5 194,610 + +0.5 194,610 + -0.1 194,611 - +1.7 194,766 - +0.8 194,811 - -1.1 194,951 - ABIE40_RS27405 0.62 +0.9 194,951 - ABIE40_RS27405 0.62 +0.0 194,963 - ABIE40_RS27405 0.68 +1.4 195,108 + -0.6 195,109 - +0.3 195,109 - +0.3 195,133 - +0.2 195,133 - +0.2 195,133 - +0.3 195,238 + +1.7 195,238 + -1.6 195,239 - -0.1 195,296 - -1.6 195,296 - -0.5 195,311 + +0.9 195,319 - -1.2 195,351 + -0.0 195,352 - +1.8 195,420 - -0.1 195,555 - -1.3 195,621 + -0.4 195,622 - +0.7 195,622 - -0.4 195,718 - ABIE40_RS27410 0.20 +0.6 195,739 + ABIE40_RS27410 0.24 +0.5 195,739 + ABIE40_RS27410 0.24 -0.5 195,827 + ABIE40_RS27410 0.45 +0.0 195,827 + ABIE40_RS27410 0.45 -0.0 195,828 - ABIE40_RS27410 0.45 -0.4 195,828 - ABIE40_RS27410 0.45 +0.2 195,830 + ABIE40_RS27410 0.46 -1.3 195,830 + ABIE40_RS27410 0.46 +0.2 195,949 + ABIE40_RS27410 0.73 -1.4 195,985 + ABIE40_RS27410 0.82 -0.1
Or see this region's nucleotide sequence