Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS26705 and ABIE40_RS26710 are separated by 462 nucleotides ABIE40_RS26710 and ABIE40_RS26715 are separated by 127 nucleotides ABIE40_RS26715 and ABIE40_RS26720 are separated by 118 nucleotides ABIE40_RS26720 and ABIE40_RS26725 are separated by 635 nucleotides
ABIE40_RS26705: ABIE40_RS26705 - response regulator, at 63,002 to 63,529
_RS26705
ABIE40_RS26710: ABIE40_RS26710 - tRNA-Ile, at 63,992 to 64,065
_RS26710
ABIE40_RS26715: ABIE40_RS26715 - hypothetical protein, at 64,193 to 64,336
_RS26715
ABIE40_RS26720: ABIE40_RS26720 - hypothetical protein, at 64,455 to 64,619
_RS26720
ABIE40_RS26725: ABIE40_RS26725 - mechanosensitive ion channel domain-containing protein, at 65,255 to 66,064
_RS26725
Position (kb)
64
65 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 63.479 kb on + strand at 63.479 kb on + strand at 63.480 kb on - strand at 63.509 kb on - strand at 63.509 kb on - strand at 63.510 kb on + strand at 63.510 kb on + strand at 63.511 kb on - strand at 63.518 kb on - strand at 63.518 kb on - strand at 63.518 kb on - strand at 63.579 kb on + strand at 63.579 kb on + strand at 63.580 kb on - strand at 63.580 kb on - strand at 63.580 kb on - strand at 63.586 kb on - strand at 63.610 kb on - strand at 63.635 kb on - strand at 63.724 kb on + strand at 63.741 kb on + strand at 63.762 kb on - strand at 63.762 kb on - strand at 63.975 kb on + strand at 63.976 kb on - strand at 63.997 kb on + strand at 63.997 kb on + strand at 64.083 kb on + strand at 64.336 kb on + strand at 64.337 kb on - strand at 64.337 kb on - strand at 64.383 kb on - strand at 64.407 kb on + strand at 64.408 kb on - strand at 64.491 kb on + strand, within ABIE40_RS26720 at 64.492 kb on - strand, within ABIE40_RS26720 at 64.634 kb on + strand at 64.660 kb on + strand at 64.660 kb on + strand at 64.660 kb on + strand at 64.660 kb on + strand at 64.661 kb on - strand at 64.661 kb on - strand at 64.664 kb on + strand at 64.664 kb on + strand at 64.664 kb on + strand at 64.664 kb on + strand at 64.665 kb on - strand at 64.665 kb on - strand at 64.665 kb on - strand at 64.737 kb on + strand at 64.737 kb on + strand at 64.741 kb on + strand at 64.741 kb on + strand at 64.741 kb on + strand at 64.741 kb on + strand at 64.746 kb on + strand at 64.746 kb on + strand at 64.746 kb on + strand at 64.747 kb on - strand at 64.831 kb on + strand at 64.838 kb on + strand at 64.838 kb on + strand at 64.852 kb on + strand at 64.852 kb on + strand at 64.852 kb on + strand at 64.852 kb on + strand at 64.852 kb on + strand at 64.853 kb on - strand at 64.853 kb on - strand at 64.853 kb on - strand at 64.860 kb on + strand at 64.861 kb on - strand at 64.861 kb on - strand at 64.863 kb on - strand at 64.940 kb on + strand at 64.965 kb on + strand at 64.966 kb on - strand at 64.991 kb on + strand at 64.991 kb on + strand at 65.001 kb on - strand at 65.060 kb on + strand at 65.060 kb on + strand at 65.060 kb on + strand at 65.060 kb on + strand at 65.061 kb on - strand at 65.061 kb on - strand at 65.061 kb on - strand at 65.061 kb on - strand at 65.061 kb on - strand at 65.113 kb on + strand at 65.114 kb on - strand at 65.219 kb on + strand at 65.219 kb on + strand at 65.220 kb on - strand at 65.220 kb on - strand at 65.220 kb on - strand at 65.428 kb on + strand, within ABIE40_RS26725 at 65.429 kb on - strand, within ABIE40_RS26725 at 65.429 kb on - strand, within ABIE40_RS26725 at 65.530 kb on + strand, within ABIE40_RS26725 at 65.530 kb on + strand, within ABIE40_RS26725 at 65.530 kb on + strand, within ABIE40_RS26725 at 65.531 kb on - strand, within ABIE40_RS26725 at 65.531 kb on - strand, within ABIE40_RS26725 at 65.537 kb on + strand, within ABIE40_RS26725 at 65.555 kb on + strand, within ABIE40_RS26725 at 65.556 kb on - strand, within ABIE40_RS26725 at 65.580 kb on + strand, within ABIE40_RS26725
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 63,479 + -0.9 63,479 + -1.7 63,480 - -0.3 63,509 - +0.0 63,509 - +0.4 63,510 + -0.8 63,510 + -0.7 63,511 - -0.0 63,518 - -0.8 63,518 - +0.5 63,518 - +0.6 63,579 + -1.2 63,579 + -1.4 63,580 - +0.3 63,580 - -1.0 63,580 - +0.5 63,586 - +0.0 63,610 - -0.7 63,635 - +1.5 63,724 + -0.6 63,741 + -0.2 63,762 - +0.8 63,762 - +0.0 63,975 + -0.1 63,976 - -0.5 63,997 + -1.1 63,997 + +0.2 64,083 + +0.1 64,336 + -1.7 64,337 - -0.1 64,337 - -1.3 64,383 - +0.0 64,407 + +0.0 64,408 - +1.3 64,491 + ABIE40_RS26720 0.22 +0.7 64,492 - ABIE40_RS26720 0.22 +0.6 64,634 + -1.2 64,660 + +0.9 64,660 + -0.7 64,660 + -1.6 64,660 + +0.1 64,661 - -2.5 64,661 - +0.6 64,664 + -0.4 64,664 + -1.1 64,664 + +1.3 64,664 + -0.5 64,665 - +0.2 64,665 - -1.0 64,665 - -0.3 64,737 + +1.5 64,737 + +1.8 64,741 + -0.9 64,741 + -0.3 64,741 + +0.6 64,741 + +0.6 64,746 + +0.0 64,746 + -0.4 64,746 + -0.7 64,747 - +0.6 64,831 + -0.7 64,838 + -1.3 64,838 + -1.0 64,852 + -1.3 64,852 + -0.5 64,852 + -0.1 64,852 + -0.4 64,852 + +0.5 64,853 - -0.5 64,853 - -1.0 64,853 - -1.4 64,860 + -1.3 64,861 - +0.7 64,861 - -0.2 64,863 - +0.4 64,940 + -0.6 64,965 + -1.8 64,966 - +0.1 64,991 + -2.0 64,991 + -1.0 65,001 - -0.7 65,060 + +0.9 65,060 + -0.7 65,060 + -0.6 65,060 + +0.6 65,061 - -0.1 65,061 - +0.9 65,061 - +1.7 65,061 - +0.6 65,061 - -0.3 65,113 + -1.0 65,114 - -0.8 65,219 + -0.1 65,219 + +0.5 65,220 - -1.3 65,220 - +0.1 65,220 - +0.0 65,428 + ABIE40_RS26725 0.21 -1.7 65,429 - ABIE40_RS26725 0.21 +0.9 65,429 - ABIE40_RS26725 0.21 +0.5 65,530 + ABIE40_RS26725 0.34 -0.8 65,530 + ABIE40_RS26725 0.34 -1.0 65,530 + ABIE40_RS26725 0.34 -0.5 65,531 - ABIE40_RS26725 0.34 -0.4 65,531 - ABIE40_RS26725 0.34 -0.0 65,537 + ABIE40_RS26725 0.35 -1.1 65,555 + ABIE40_RS26725 0.37 +1.3 65,556 - ABIE40_RS26725 0.37 -1.6 65,580 + ABIE40_RS26725 0.40 +0.8
Or see this region's nucleotide sequence