Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS26680 and ABIE40_RS26685 are separated by 24 nucleotides ABIE40_RS26685 and ABIE40_RS26690 are separated by 458 nucleotides
ABIE40_RS26680: ABIE40_RS26680 - general stress protein, at 57,965 to 58,567
_RS26680
ABIE40_RS26685: ABIE40_RS26685 - PepSY domain-containing protein, at 58,592 to 58,903
_RS26685
ABIE40_RS26690: ABIE40_RS26690 - hypothetical protein, at 59,362 to 59,718
_RS26690
Position (kb) 58
59 Strain fitness (log2 ratio) -2
-1
0
1
2 at 57.655 kb on + strand at 57.656 kb on - strand at 57.741 kb on + strand at 57.741 kb on + strand at 57.741 kb on + strand at 57.741 kb on + strand at 57.742 kb on - strand at 57.742 kb on - strand at 57.756 kb on + strand at 57.756 kb on + strand at 57.757 kb on - strand at 57.776 kb on + strand at 57.776 kb on + strand at 57.814 kb on - strand at 58.013 kb on - strand at 58.013 kb on - strand at 58.013 kb on - strand at 58.014 kb on + strand at 58.060 kb on - strand, within ABIE40_RS26680 at 58.076 kb on + strand, within ABIE40_RS26680 at 58.077 kb on - strand, within ABIE40_RS26680 at 58.080 kb on + strand, within ABIE40_RS26680 at 58.080 kb on + strand, within ABIE40_RS26680 at 58.081 kb on - strand, within ABIE40_RS26680 at 58.185 kb on + strand, within ABIE40_RS26680 at 58.185 kb on + strand, within ABIE40_RS26680 at 58.185 kb on + strand, within ABIE40_RS26680 at 58.186 kb on - strand, within ABIE40_RS26680 at 58.536 kb on + strand at 58.537 kb on - strand at 58.537 kb on - strand at 58.545 kb on + strand at 58.545 kb on + strand at 58.593 kb on + strand at 58.594 kb on - strand at 58.730 kb on - strand, within ABIE40_RS26685 at 58.766 kb on - strand, within ABIE40_RS26685 at 58.798 kb on + strand, within ABIE40_RS26685 at 58.798 kb on + strand, within ABIE40_RS26685 at 58.799 kb on - strand, within ABIE40_RS26685 at 58.799 kb on - strand, within ABIE40_RS26685 at 58.962 kb on + strand at 58.962 kb on + strand at 58.988 kb on + strand at 59.053 kb on - strand at 59.053 kb on - strand at 59.087 kb on - strand at 59.087 kb on - strand at 59.118 kb on - strand at 59.431 kb on + strand, within ABIE40_RS26690 at 59.432 kb on - strand, within ABIE40_RS26690 at 59.464 kb on + strand, within ABIE40_RS26690 at 59.464 kb on + strand, within ABIE40_RS26690 at 59.465 kb on - strand, within ABIE40_RS26690 at 59.496 kb on + strand, within ABIE40_RS26690 at 59.496 kb on + strand, within ABIE40_RS26690 at 59.527 kb on + strand, within ABIE40_RS26690 at 59.527 kb on + strand, within ABIE40_RS26690 at 59.527 kb on + strand, within ABIE40_RS26690 at 59.528 kb on - strand, within ABIE40_RS26690 at 59.528 kb on - strand, within ABIE40_RS26690 at 59.528 kb on - strand, within ABIE40_RS26690 at 59.528 kb on - strand, within ABIE40_RS26690 at 59.528 kb on - strand, within ABIE40_RS26690 at 59.528 kb on - strand, within ABIE40_RS26690 at 59.528 kb on - strand, within ABIE40_RS26690 at 59.604 kb on + strand, within ABIE40_RS26690
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 57,655 + -0.3 57,656 - -0.7 57,741 + -0.3 57,741 + -1.5 57,741 + +0.1 57,741 + +0.7 57,742 - +0.3 57,742 - +0.5 57,756 + +0.8 57,756 + +0.4 57,757 - +0.9 57,776 + -0.1 57,776 + -0.4 57,814 - -2.5 58,013 - +0.3 58,013 - -1.5 58,013 - +1.5 58,014 + +0.9 58,060 - ABIE40_RS26680 0.16 +0.2 58,076 + ABIE40_RS26680 0.18 +0.7 58,077 - ABIE40_RS26680 0.19 -1.6 58,080 + ABIE40_RS26680 0.19 +0.8 58,080 + ABIE40_RS26680 0.19 +0.4 58,081 - ABIE40_RS26680 0.19 +0.5 58,185 + ABIE40_RS26680 0.36 -1.5 58,185 + ABIE40_RS26680 0.36 -0.2 58,185 + ABIE40_RS26680 0.36 +1.2 58,186 - ABIE40_RS26680 0.37 +0.2 58,536 + +0.2 58,537 - -0.6 58,537 - +0.2 58,545 + -0.1 58,545 + +0.7 58,593 + -0.6 58,594 - -0.3 58,730 - ABIE40_RS26685 0.44 +0.7 58,766 - ABIE40_RS26685 0.56 +0.3 58,798 + ABIE40_RS26685 0.66 +0.1 58,798 + ABIE40_RS26685 0.66 -0.3 58,799 - ABIE40_RS26685 0.66 +0.3 58,799 - ABIE40_RS26685 0.66 +1.3 58,962 + +0.3 58,962 + -1.0 58,988 + +0.9 59,053 - +1.3 59,053 - -1.2 59,087 - -1.0 59,087 - +0.6 59,118 - +1.1 59,431 + ABIE40_RS26690 0.19 -0.4 59,432 - ABIE40_RS26690 0.20 +0.3 59,464 + ABIE40_RS26690 0.29 -0.8 59,464 + ABIE40_RS26690 0.29 -0.4 59,465 - ABIE40_RS26690 0.29 -2.0 59,496 + ABIE40_RS26690 0.38 -0.1 59,496 + ABIE40_RS26690 0.38 -1.0 59,527 + ABIE40_RS26690 0.46 -0.0 59,527 + ABIE40_RS26690 0.46 +0.2 59,527 + ABIE40_RS26690 0.46 -0.0 59,528 - ABIE40_RS26690 0.46 +1.1 59,528 - ABIE40_RS26690 0.46 +0.6 59,528 - ABIE40_RS26690 0.46 +0.2 59,528 - ABIE40_RS26690 0.46 +2.5 59,528 - ABIE40_RS26690 0.46 +0.7 59,528 - ABIE40_RS26690 0.46 +0.3 59,528 - ABIE40_RS26690 0.46 -0.3 59,604 + ABIE40_RS26690 0.68 -1.4
Or see this region's nucleotide sequence