Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS26220 and ABIE40_RS26225 are separated by 26 nucleotides ABIE40_RS26225 and ABIE40_RS26230 are separated by 142 nucleotides ABIE40_RS26230 and ABIE40_RS26235 are separated by 6 nucleotides
ABIE40_RS26220: ABIE40_RS26220 - LysR family transcriptional regulator, at 1,425,499 to 1,426,425
_RS26220
ABIE40_RS26225: ABIE40_RS26225 - BON domain-containing protein, at 1,426,452 to 1,426,706
_RS26225
ABIE40_RS26230: ABIE40_RS26230 - cytochrome b/b6 domain-containing protein, at 1,426,849 to 1,427,340
_RS26230
ABIE40_RS26235: ABIE40_RS26235 - hypothetical protein, at 1,427,347 to 1,427,841
_RS26235
Position (kb)
1426
1427 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1425.715 kb on + strand, within ABIE40_RS26220 at 1425.715 kb on + strand, within ABIE40_RS26220 at 1425.716 kb on - strand, within ABIE40_RS26220 at 1425.754 kb on + strand, within ABIE40_RS26220 at 1425.755 kb on - strand, within ABIE40_RS26220 at 1425.810 kb on - strand, within ABIE40_RS26220 at 1425.865 kb on + strand, within ABIE40_RS26220 at 1425.866 kb on - strand, within ABIE40_RS26220 at 1425.866 kb on - strand, within ABIE40_RS26220 at 1425.900 kb on + strand, within ABIE40_RS26220 at 1426.117 kb on + strand, within ABIE40_RS26220 at 1426.117 kb on + strand, within ABIE40_RS26220 at 1426.118 kb on - strand, within ABIE40_RS26220 at 1426.137 kb on - strand, within ABIE40_RS26220 at 1426.142 kb on - strand, within ABIE40_RS26220 at 1426.316 kb on + strand, within ABIE40_RS26220 at 1426.316 kb on + strand, within ABIE40_RS26220 at 1426.316 kb on + strand, within ABIE40_RS26220 at 1426.316 kb on + strand, within ABIE40_RS26220 at 1426.316 kb on + strand, within ABIE40_RS26220 at 1426.316 kb on + strand, within ABIE40_RS26220 at 1426.317 kb on - strand, within ABIE40_RS26220 at 1426.453 kb on + strand at 1426.487 kb on + strand, within ABIE40_RS26225 at 1426.487 kb on + strand, within ABIE40_RS26225 at 1426.488 kb on - strand, within ABIE40_RS26225 at 1426.691 kb on + strand at 1426.691 kb on + strand at 1426.771 kb on - strand at 1426.864 kb on + strand at 1426.864 kb on + strand at 1426.864 kb on + strand at 1426.864 kb on + strand at 1426.864 kb on + strand at 1426.864 kb on + strand at 1426.864 kb on + strand at 1426.865 kb on - strand at 1426.865 kb on - strand at 1426.865 kb on - strand at 1426.865 kb on - strand at 1426.865 kb on - strand at 1426.865 kb on - strand at 1426.962 kb on + strand, within ABIE40_RS26230 at 1426.962 kb on + strand, within ABIE40_RS26230 at 1426.963 kb on - strand, within ABIE40_RS26230 at 1426.963 kb on - strand, within ABIE40_RS26230 at 1426.963 kb on - strand, within ABIE40_RS26230 at 1426.963 kb on - strand, within ABIE40_RS26230 at 1427.017 kb on + strand, within ABIE40_RS26230 at 1427.017 kb on + strand, within ABIE40_RS26230 at 1427.017 kb on + strand, within ABIE40_RS26230 at 1427.017 kb on + strand, within ABIE40_RS26230 at 1427.017 kb on + strand, within ABIE40_RS26230 at 1427.018 kb on - strand, within ABIE40_RS26230 at 1427.018 kb on - strand, within ABIE40_RS26230 at 1427.018 kb on - strand, within ABIE40_RS26230 at 1427.018 kb on - strand, within ABIE40_RS26230 at 1427.018 kb on - strand, within ABIE40_RS26230 at 1427.018 kb on - strand, within ABIE40_RS26230 at 1427.018 kb on - strand, within ABIE40_RS26230 at 1427.019 kb on + strand, within ABIE40_RS26230 at 1427.149 kb on + strand, within ABIE40_RS26230 at 1427.149 kb on + strand, within ABIE40_RS26230 at 1427.149 kb on + strand, within ABIE40_RS26230 at 1427.149 kb on + strand, within ABIE40_RS26230 at 1427.191 kb on + strand, within ABIE40_RS26230 at 1427.192 kb on - strand, within ABIE40_RS26230 at 1427.192 kb on - strand, within ABIE40_RS26230 at 1427.194 kb on + strand, within ABIE40_RS26230 at 1427.194 kb on + strand, within ABIE40_RS26230 at 1427.194 kb on + strand, within ABIE40_RS26230 at 1427.195 kb on - strand, within ABIE40_RS26230 at 1427.195 kb on - strand, within ABIE40_RS26230 at 1427.195 kb on - strand, within ABIE40_RS26230 at 1427.195 kb on - strand, within ABIE40_RS26230 at 1427.195 kb on - strand, within ABIE40_RS26230 at 1427.195 kb on - strand, within ABIE40_RS26230 at 1427.299 kb on + strand at 1427.300 kb on - strand at 1427.300 kb on - strand at 1427.413 kb on - strand, within ABIE40_RS26235 at 1427.413 kb on - strand, within ABIE40_RS26235 at 1427.413 kb on - strand, within ABIE40_RS26235 at 1427.491 kb on + strand, within ABIE40_RS26235 at 1427.491 kb on + strand, within ABIE40_RS26235
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 1,425,715 + ABIE40_RS26220 0.23 -0.3 1,425,715 + ABIE40_RS26220 0.23 -0.2 1,425,716 - ABIE40_RS26220 0.23 +0.3 1,425,754 + ABIE40_RS26220 0.28 -0.4 1,425,755 - ABIE40_RS26220 0.28 +0.1 1,425,810 - ABIE40_RS26220 0.34 -1.5 1,425,865 + ABIE40_RS26220 0.39 +0.2 1,425,866 - ABIE40_RS26220 0.40 +2.0 1,425,866 - ABIE40_RS26220 0.40 -2.0 1,425,900 + ABIE40_RS26220 0.43 -0.4 1,426,117 + ABIE40_RS26220 0.67 -0.3 1,426,117 + ABIE40_RS26220 0.67 -0.4 1,426,118 - ABIE40_RS26220 0.67 -0.8 1,426,137 - ABIE40_RS26220 0.69 -2.8 1,426,142 - ABIE40_RS26220 0.69 -1.7 1,426,316 + ABIE40_RS26220 0.88 -0.4 1,426,316 + ABIE40_RS26220 0.88 -0.2 1,426,316 + ABIE40_RS26220 0.88 +1.8 1,426,316 + ABIE40_RS26220 0.88 -0.6 1,426,316 + ABIE40_RS26220 0.88 +1.2 1,426,316 + ABIE40_RS26220 0.88 +3.7 1,426,317 - ABIE40_RS26220 0.88 -0.1 1,426,453 + -0.4 1,426,487 + ABIE40_RS26225 0.14 +1.4 1,426,487 + ABIE40_RS26225 0.14 +0.3 1,426,488 - ABIE40_RS26225 0.14 +0.5 1,426,691 + +1.2 1,426,691 + +1.1 1,426,771 - -0.8 1,426,864 + +0.4 1,426,864 + -0.3 1,426,864 + -1.0 1,426,864 + -0.1 1,426,864 + -0.2 1,426,864 + +0.7 1,426,864 + -0.7 1,426,865 - -0.1 1,426,865 - +1.6 1,426,865 - -1.0 1,426,865 - -0.0 1,426,865 - +0.6 1,426,865 - -0.7 1,426,962 + ABIE40_RS26230 0.23 -2.1 1,426,962 + ABIE40_RS26230 0.23 -0.7 1,426,963 - ABIE40_RS26230 0.23 -2.9 1,426,963 - ABIE40_RS26230 0.23 +0.3 1,426,963 - ABIE40_RS26230 0.23 -0.7 1,426,963 - ABIE40_RS26230 0.23 +0.3 1,427,017 + ABIE40_RS26230 0.34 +0.9 1,427,017 + ABIE40_RS26230 0.34 -3.5 1,427,017 + ABIE40_RS26230 0.34 -0.6 1,427,017 + ABIE40_RS26230 0.34 +0.6 1,427,017 + ABIE40_RS26230 0.34 -0.6 1,427,018 - ABIE40_RS26230 0.34 -0.1 1,427,018 - ABIE40_RS26230 0.34 +0.8 1,427,018 - ABIE40_RS26230 0.34 +0.1 1,427,018 - ABIE40_RS26230 0.34 -0.5 1,427,018 - ABIE40_RS26230 0.34 -0.0 1,427,018 - ABIE40_RS26230 0.34 +0.2 1,427,018 - ABIE40_RS26230 0.34 -0.5 1,427,019 + ABIE40_RS26230 0.35 +0.2 1,427,149 + ABIE40_RS26230 0.61 -0.7 1,427,149 + ABIE40_RS26230 0.61 +0.5 1,427,149 + ABIE40_RS26230 0.61 +1.2 1,427,149 + ABIE40_RS26230 0.61 +0.4 1,427,191 + ABIE40_RS26230 0.70 -1.2 1,427,192 - ABIE40_RS26230 0.70 -2.2 1,427,192 - ABIE40_RS26230 0.70 +0.5 1,427,194 + ABIE40_RS26230 0.70 -0.4 1,427,194 + ABIE40_RS26230 0.70 -0.7 1,427,194 + ABIE40_RS26230 0.70 +0.9 1,427,195 - ABIE40_RS26230 0.70 -0.4 1,427,195 - ABIE40_RS26230 0.70 +0.4 1,427,195 - ABIE40_RS26230 0.70 +0.8 1,427,195 - ABIE40_RS26230 0.70 +0.6 1,427,195 - ABIE40_RS26230 0.70 +0.7 1,427,195 - ABIE40_RS26230 0.70 +2.1 1,427,299 + +0.3 1,427,300 - -0.0 1,427,300 - -0.3 1,427,413 - ABIE40_RS26235 0.13 +0.5 1,427,413 - ABIE40_RS26235 0.13 +0.3 1,427,413 - ABIE40_RS26235 0.13 +0.1 1,427,491 + ABIE40_RS26235 0.29 -0.1 1,427,491 + ABIE40_RS26235 0.29 -0.6
Or see this region's nucleotide sequence