Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS25035

Experiment: D-Glucose-6-Phosphate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate (C)
1,170,752	+				-3.4
1,170,752	+				-1.3
1,170,753	-				+0.1
1,170,753	-				-0.6
1,170,753	-				+0.3
1,170,753	-				-0.6
1,170,753	-				-0.7
1,170,848	+		ABIE40_RS25030	0.14	-1.7
1,170,848	+		ABIE40_RS25030	0.14	+0.4
1,170,848	+		ABIE40_RS25030	0.14	-4.1
1,170,848	+		ABIE40_RS25030	0.14	+0.1
1,170,849	-		ABIE40_RS25030	0.14	+0.5
1,170,849	-		ABIE40_RS25030	0.14	+1.6
1,170,849	-		ABIE40_RS25030	0.14	+0.9
1,170,849	-		ABIE40_RS25030	0.14	-1.1
1,170,861	+		ABIE40_RS25030	0.15	-1.1
1,170,861	+		ABIE40_RS25030	0.15	-2.4
1,170,861	+		ABIE40_RS25030	0.15	-2.6
1,170,861	+		ABIE40_RS25030	0.15	-2.7
1,170,862	-		ABIE40_RS25030	0.16	-0.3
1,170,862	-		ABIE40_RS25030	0.16	+0.2
1,170,862	-		ABIE40_RS25030	0.16	-3.3
1,170,862	-		ABIE40_RS25030	0.16	-1.5
1,170,862	-		ABIE40_RS25030	0.16	-0.3
1,170,862	-		ABIE40_RS25030	0.16	-1.0
1,170,863	+		ABIE40_RS25030	0.16	-2.4
1,170,863	+		ABIE40_RS25030	0.16	-2.5
1,170,863	+		ABIE40_RS25030	0.16	-2.0
1,170,864	-		ABIE40_RS25030	0.16	-0.1
1,170,864	-		ABIE40_RS25030	0.16	+0.4
1,170,864	-		ABIE40_RS25030	0.16	-1.1
1,170,864	-		ABIE40_RS25030	0.16	-0.0
1,170,982	-		ABIE40_RS25030	0.29	+0.8
1,170,982	-		ABIE40_RS25030	0.29	-1.5
1,170,982	-		ABIE40_RS25030	0.29	-1.2
1,170,982	-		ABIE40_RS25030	0.29	-0.2
1,170,982	-		ABIE40_RS25030	0.29	-0.2
1,170,982	-		ABIE40_RS25030	0.29	-0.9
1,171,035	-		ABIE40_RS25030	0.34	-2.0
1,171,124	+		ABIE40_RS25030	0.44	-2.3
1,171,124	+		ABIE40_RS25030	0.44	-2.1
1,171,125	-		ABIE40_RS25030	0.44	-0.9
1,171,125	-		ABIE40_RS25030	0.44	-0.3
1,171,125	-		ABIE40_RS25030	0.44	-1.5
1,171,181	+		ABIE40_RS25030	0.50	-2.1
1,171,181	+		ABIE40_RS25030	0.50	-0.7
1,171,182	-		ABIE40_RS25030	0.50	-0.3
1,171,182	-		ABIE40_RS25030	0.50	-0.0
1,171,182	-		ABIE40_RS25030	0.50	+0.2
1,171,220	+		ABIE40_RS25030	0.54	-0.7
1,171,220	+		ABIE40_RS25030	0.54	-2.2
1,171,221	-		ABIE40_RS25030	0.54	-0.9
1,171,221	-		ABIE40_RS25030	0.54	-1.5
1,171,433	+		ABIE40_RS25030	0.77	-1.7
1,171,434	-		ABIE40_RS25030	0.77	+2.1
1,171,487	+		ABIE40_RS25030	0.83	-1.5
1,171,487	+		ABIE40_RS25030	0.83	-2.3
1,171,488	-		ABIE40_RS25030	0.83	-1.4
1,171,488	-		ABIE40_RS25030	0.83	-1.1
1,171,568	+				-1.7
1,171,568	+				-3.6
1,171,568	+				-2.8
1,171,568	+				-1.4
1,171,569	-				-1.7
1,171,569	-				-1.3
1,171,569	-				-1.5
1,171,569	-				-1.8
1,171,569	-				-1.6
1,171,569	-				-0.3
1,171,620	+				-2.8
1,171,707	+				-1.4
1,171,707	+				+1.2
1,171,707	+				-1.5
1,172,046	+		ABIE40_RS25035	0.28	-2.0
1,172,046	+		ABIE40_RS25035	0.28	-0.6
1,172,046	+		ABIE40_RS25035	0.28	-1.3
1,172,046	+		ABIE40_RS25035	0.28	-1.8
1,172,047	-		ABIE40_RS25035	0.28	-0.7
1,172,047	-		ABIE40_RS25035	0.28	-0.5
1,172,047	-		ABIE40_RS25035	0.28	-0.8
1,172,093	+		ABIE40_RS25035	0.32	-1.5
1,172,353	+		ABIE40_RS25035	0.54	-1.3
1,172,376	+		ABIE40_RS25035	0.56	+1.1
1,172,376	+		ABIE40_RS25035	0.56	-2.5
1,172,376	+		ABIE40_RS25035	0.56	-2.6
1,172,381	-		ABIE40_RS25035	0.56	-1.0
1,172,478	+		ABIE40_RS25035	0.64	-0.8
1,172,478	+		ABIE40_RS25035	0.64	-3.9
1,172,478	+		ABIE40_RS25035	0.64	-1.4
1,172,479	-		ABIE40_RS25035	0.64	+0.1
1,172,479	-		ABIE40_RS25035	0.64	-1.2
1,172,479	-		ABIE40_RS25035	0.64	+0.9
1,172,484	+		ABIE40_RS25035	0.65	-2.8
1,172,484	+		ABIE40_RS25035	0.65	-1.7
1,172,484	+		ABIE40_RS25035	0.65	-1.2
1,172,496	+		ABIE40_RS25035	0.66	-1.9
1,172,496	+		ABIE40_RS25035	0.66	-1.9
1,172,497	-		ABIE40_RS25035	0.66	-1.6
1,172,497	-		ABIE40_RS25035	0.66	-1.1
1,172,511	+		ABIE40_RS25035	0.67	-3.0
1,172,511	+		ABIE40_RS25035	0.67	-1.9
1,172,512	-		ABIE40_RS25035	0.67	+0.6
1,172,512	-		ABIE40_RS25035	0.67	+0.7
1,172,514	+		ABIE40_RS25035	0.67	-3.2
1,172,514	+		ABIE40_RS25035	0.67	-4.1
1,172,514	+		ABIE40_RS25035	0.67	-2.8
1,172,514	+		ABIE40_RS25035	0.67	-2.0
1,172,515	-		ABIE40_RS25035	0.67	-2.8
1,172,694	+		ABIE40_RS25035	0.82	-1.3
1,172,695	-		ABIE40_RS25035	0.82	-3.1
1,172,695	-		ABIE40_RS25035	0.82	-0.5
1,172,695	-		ABIE40_RS25035	0.82	-1.3
1,172,695	-		ABIE40_RS25035	0.82	-0.9
1,172,695	-		ABIE40_RS25035	0.82	+0.1
1,172,706	+		ABIE40_RS25035	0.83	-0.6
1,172,707	-		ABIE40_RS25035	0.83	-0.7
1,172,709	+		ABIE40_RS25035	0.83	-1.2
1,172,709	+		ABIE40_RS25035	0.83	-1.3
1,172,709	+		ABIE40_RS25035	0.83	-2.2
1,172,709	+		ABIE40_RS25035	0.83	-1.1
1,172,709	+		ABIE40_RS25035	0.83	-2.9
1,172,709	+		ABIE40_RS25035	0.83	-1.1
1,172,710	-		ABIE40_RS25035	0.83	-2.9
1,172,710	-		ABIE40_RS25035	0.83	-2.0
1,172,710	-		ABIE40_RS25035	0.83	-0.2
1,172,710	-		ABIE40_RS25035	0.83	-2.9
1,172,710	-		ABIE40_RS25035	0.83	-3.5
1,172,710	-		ABIE40_RS25035	0.83	-3.0
1,172,710	-		ABIE40_RS25035	0.83	-0.9
1,172,710	-		ABIE40_RS25035	0.83	-2.3
1,172,746	+		ABIE40_RS25035	0.86	-2.4
1,172,814	+				-0.4
1,172,851	+				-2.0
1,172,852	-				-1.7
1,172,852	-				-1.8
1,172,922	+				+1.5
1,172,922	+				-1.6
1,172,922	+				-1.7
1,172,923	-				+1.4
1,172,923	-				-0.4
1,172,928	-				+2.1
1,172,928	-				-1.0
1,172,928	-				-1.3
1,172,933	+				-0.2
1,172,933	+				-0.1
1,172,934	-				+0.5
1,172,934	-				+0.7
1,172,934	-				-1.5
1,172,934	-				-0.7
1,172,934	-				+0.4
1,172,934	-				-0.9
1,173,137	+		ABIE40_RS25040	0.21	-2.5
1,173,138	-		ABIE40_RS25040	0.21	+0.9
1,173,138	-		ABIE40_RS25040	0.21	+1.1
1,173,224	+		ABIE40_RS25040	0.30	-2.3
1,173,224	+		ABIE40_RS25040	0.30	-1.8
1,173,224	+		ABIE40_RS25040	0.30	-2.0
1,173,225	-		ABIE40_RS25040	0.30	-1.0
1,173,225	-		ABIE40_RS25040	0.30	-0.7
1,173,236	+		ABIE40_RS25040	0.31	-2.4
1,173,237	-		ABIE40_RS25040	0.31	-1.4
1,173,285	+		ABIE40_RS25040	0.36	-2.1
1,173,287	+		ABIE40_RS25040	0.36	-2.4
1,173,288	-		ABIE40_RS25040	0.36	+0.6
1,173,288	-		ABIE40_RS25040	0.36	+0.2
1,173,288	-		ABIE40_RS25040	0.36	-0.5
1,173,314	+		ABIE40_RS25040	0.39	-0.0
1,173,315	-		ABIE40_RS25040	0.39	-0.8
1,173,315	-		ABIE40_RS25040	0.39	-1.6
1,173,315	-		ABIE40_RS25040	0.39	-0.4
1,173,323	+		ABIE40_RS25040	0.40	+0.3
1,173,555	+		ABIE40_RS25040	0.63	-2.9
1,173,555	+		ABIE40_RS25040	0.63	-0.3
1,173,555	+		ABIE40_RS25040	0.63	-2.4
1,173,556	-		ABIE40_RS25040	0.63	-0.4
1,173,556	-		ABIE40_RS25040	0.63	-0.2
1,173,556	-		ABIE40_RS25040	0.63	-0.1
1,173,556	-		ABIE40_RS25040	0.63	-1.9
1,173,556	-		ABIE40_RS25040	0.63	+0.5
1,173,848	+				-1.8
1,173,848	+				-0.8
1,173,859	+				-1.2
1,173,860	-				+0.6
1,173,860	-				-0.8
1,173,897	+				-2.0
1,173,897	+				-2.8
1,173,898	-				+0.4
1,173,898	-				-0.5