Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS24010 and ABIE40_RS24015 are separated by 3 nucleotides ABIE40_RS24015 and ABIE40_RS24020 are separated by 4 nucleotides
ABIE40_RS24010: ABIE40_RS24010 - ABC transporter ATP-binding protein, at 945,109 to 946,119
_RS24010
ABIE40_RS24015: ABIE40_RS24015 - ABC transporter permease, at 946,123 to 946,965
_RS24015
ABIE40_RS24020: ABIE40_RS24020 - ABC transporter permease, at 946,970 to 947,983
_RS24020
Position (kb) 946
947 Strain fitness (log2 ratio) -2
-1
0
1
2 at 945.369 kb on + strand, within ABIE40_RS24010 at 945.369 kb on + strand, within ABIE40_RS24010 at 945.371 kb on + strand, within ABIE40_RS24010 at 945.371 kb on + strand, within ABIE40_RS24010 at 945.371 kb on + strand, within ABIE40_RS24010 at 945.434 kb on + strand, within ABIE40_RS24010 at 945.434 kb on + strand, within ABIE40_RS24010 at 945.434 kb on + strand, within ABIE40_RS24010 at 945.435 kb on - strand, within ABIE40_RS24010 at 945.435 kb on - strand, within ABIE40_RS24010 at 945.435 kb on - strand, within ABIE40_RS24010 at 945.435 kb on - strand, within ABIE40_RS24010 at 945.435 kb on - strand, within ABIE40_RS24010 at 945.668 kb on + strand, within ABIE40_RS24010 at 945.668 kb on + strand, within ABIE40_RS24010 at 945.668 kb on + strand, within ABIE40_RS24010 at 945.668 kb on + strand, within ABIE40_RS24010 at 946.075 kb on + strand at 946.076 kb on - strand at 946.076 kb on - strand at 946.076 kb on - strand at 946.232 kb on + strand, within ABIE40_RS24015 at 946.232 kb on + strand, within ABIE40_RS24015 at 946.443 kb on + strand, within ABIE40_RS24015 at 946.444 kb on - strand, within ABIE40_RS24015 at 946.444 kb on - strand, within ABIE40_RS24015 at 946.493 kb on + strand, within ABIE40_RS24015 at 946.493 kb on + strand, within ABIE40_RS24015 at 946.493 kb on + strand, within ABIE40_RS24015 at 946.493 kb on + strand, within ABIE40_RS24015 at 946.493 kb on + strand, within ABIE40_RS24015 at 946.667 kb on - strand, within ABIE40_RS24015 at 946.721 kb on + strand, within ABIE40_RS24015 at 946.721 kb on + strand, within ABIE40_RS24015 at 946.721 kb on + strand, within ABIE40_RS24015 at 946.733 kb on + strand, within ABIE40_RS24015 at 946.734 kb on - strand, within ABIE40_RS24015 at 946.952 kb on - strand at 946.952 kb on - strand at 947.005 kb on - strand at 947.005 kb on - strand at 947.080 kb on - strand, within ABIE40_RS24020 at 947.109 kb on + strand, within ABIE40_RS24020 at 947.110 kb on - strand, within ABIE40_RS24020 at 947.110 kb on - strand, within ABIE40_RS24020 at 947.110 kb on - strand, within ABIE40_RS24020 at 947.110 kb on - strand, within ABIE40_RS24020 at 947.181 kb on + strand, within ABIE40_RS24020 at 947.182 kb on - strand, within ABIE40_RS24020 at 947.182 kb on - strand, within ABIE40_RS24020 at 947.280 kb on + strand, within ABIE40_RS24020 at 947.280 kb on + strand, within ABIE40_RS24020 at 947.280 kb on + strand, within ABIE40_RS24020 at 947.280 kb on + strand, within ABIE40_RS24020 at 947.280 kb on + strand, within ABIE40_RS24020 at 947.281 kb on - strand, within ABIE40_RS24020 at 947.281 kb on - strand, within ABIE40_RS24020 at 947.281 kb on - strand, within ABIE40_RS24020 at 947.281 kb on - strand, within ABIE40_RS24020 at 947.281 kb on - strand, within ABIE40_RS24020 at 947.281 kb on - strand, within ABIE40_RS24020 at 947.281 kb on - strand, within ABIE40_RS24020 at 947.281 kb on - strand, within ABIE40_RS24020 at 947.281 kb on - strand, within ABIE40_RS24020 at 947.281 kb on - strand, within ABIE40_RS24020 at 947.433 kb on + strand, within ABIE40_RS24020 at 947.434 kb on - strand, within ABIE40_RS24020 at 947.434 kb on - strand, within ABIE40_RS24020 at 947.434 kb on - strand, within ABIE40_RS24020 at 947.520 kb on + strand, within ABIE40_RS24020 at 947.589 kb on + strand, within ABIE40_RS24020 at 947.775 kb on + strand, within ABIE40_RS24020 at 947.775 kb on + strand, within ABIE40_RS24020 at 947.775 kb on + strand, within ABIE40_RS24020 at 947.775 kb on + strand, within ABIE40_RS24020 at 947.775 kb on + strand, within ABIE40_RS24020 at 947.775 kb on + strand, within ABIE40_RS24020 at 947.784 kb on + strand, within ABIE40_RS24020 at 947.785 kb on - strand, within ABIE40_RS24020 at 947.785 kb on - strand, within ABIE40_RS24020 at 947.785 kb on - strand, within ABIE40_RS24020
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 945,369 + ABIE40_RS24010 0.26 +0.3 945,369 + ABIE40_RS24010 0.26 -2.4 945,371 + ABIE40_RS24010 0.26 -0.3 945,371 + ABIE40_RS24010 0.26 -0.1 945,371 + ABIE40_RS24010 0.26 +0.7 945,434 + ABIE40_RS24010 0.32 +0.1 945,434 + ABIE40_RS24010 0.32 +1.2 945,434 + ABIE40_RS24010 0.32 -0.4 945,435 - ABIE40_RS24010 0.32 -0.9 945,435 - ABIE40_RS24010 0.32 +0.1 945,435 - ABIE40_RS24010 0.32 -0.9 945,435 - ABIE40_RS24010 0.32 -1.3 945,435 - ABIE40_RS24010 0.32 -1.8 945,668 + ABIE40_RS24010 0.55 +0.7 945,668 + ABIE40_RS24010 0.55 -0.3 945,668 + ABIE40_RS24010 0.55 +0.1 945,668 + ABIE40_RS24010 0.55 -0.0 946,075 + -0.9 946,076 - -0.3 946,076 - +0.7 946,076 - -0.9 946,232 + ABIE40_RS24015 0.13 +0.3 946,232 + ABIE40_RS24015 0.13 +0.5 946,443 + ABIE40_RS24015 0.38 -0.6 946,444 - ABIE40_RS24015 0.38 +0.4 946,444 - ABIE40_RS24015 0.38 +2.1 946,493 + ABIE40_RS24015 0.44 -0.0 946,493 + ABIE40_RS24015 0.44 +0.4 946,493 + ABIE40_RS24015 0.44 +1.1 946,493 + ABIE40_RS24015 0.44 +0.5 946,493 + ABIE40_RS24015 0.44 -1.3 946,667 - ABIE40_RS24015 0.65 -1.1 946,721 + ABIE40_RS24015 0.71 +0.3 946,721 + ABIE40_RS24015 0.71 +2.6 946,721 + ABIE40_RS24015 0.71 -0.0 946,733 + ABIE40_RS24015 0.72 +0.4 946,734 - ABIE40_RS24015 0.72 +0.8 946,952 - +0.1 946,952 - -0.6 947,005 - -0.9 947,005 - -1.4 947,080 - ABIE40_RS24020 0.11 +0.8 947,109 + ABIE40_RS24020 0.14 -1.6 947,110 - ABIE40_RS24020 0.14 +0.7 947,110 - ABIE40_RS24020 0.14 +0.3 947,110 - ABIE40_RS24020 0.14 -0.0 947,110 - ABIE40_RS24020 0.14 -2.5 947,181 + ABIE40_RS24020 0.21 -0.8 947,182 - ABIE40_RS24020 0.21 -0.3 947,182 - ABIE40_RS24020 0.21 -2.6 947,280 + ABIE40_RS24020 0.31 -0.1 947,280 + ABIE40_RS24020 0.31 -1.8 947,280 + ABIE40_RS24020 0.31 -0.3 947,280 + ABIE40_RS24020 0.31 +0.3 947,280 + ABIE40_RS24020 0.31 -1.1 947,281 - ABIE40_RS24020 0.31 +0.8 947,281 - ABIE40_RS24020 0.31 -0.2 947,281 - ABIE40_RS24020 0.31 -0.5 947,281 - ABIE40_RS24020 0.31 -0.9 947,281 - ABIE40_RS24020 0.31 +0.6 947,281 - ABIE40_RS24020 0.31 +0.3 947,281 - ABIE40_RS24020 0.31 -0.2 947,281 - ABIE40_RS24020 0.31 -1.6 947,281 - ABIE40_RS24020 0.31 +0.7 947,281 - ABIE40_RS24020 0.31 -0.4 947,433 + ABIE40_RS24020 0.46 -0.5 947,434 - ABIE40_RS24020 0.46 +0.3 947,434 - ABIE40_RS24020 0.46 +0.3 947,434 - ABIE40_RS24020 0.46 +0.2 947,520 + ABIE40_RS24020 0.54 -0.3 947,589 + ABIE40_RS24020 0.61 -0.1 947,775 + ABIE40_RS24020 0.79 -1.4 947,775 + ABIE40_RS24020 0.79 -0.2 947,775 + ABIE40_RS24020 0.79 +2.6 947,775 + ABIE40_RS24020 0.79 +0.2 947,775 + ABIE40_RS24020 0.79 +0.7 947,775 + ABIE40_RS24020 0.79 -0.0 947,784 + ABIE40_RS24020 0.80 -0.6 947,785 - ABIE40_RS24020 0.80 -0.3 947,785 - ABIE40_RS24020 0.80 -2.1 947,785 - ABIE40_RS24020 0.80 -0.4
Or see this region's nucleotide sequence