Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS23625 and ABIE40_RS23630 are separated by 111 nucleotides ABIE40_RS23630 and ABIE40_RS23635 are separated by 51 nucleotides ABIE40_RS23635 and ABIE40_RS23640 overlap by 4 nucleotides ABIE40_RS23640 and ABIE40_RS23645 are separated by 75 nucleotides
ABIE40_RS23625: ABIE40_RS23625 - DUF1236 domain-containing protein, at 871,049 to 871,447
_RS23625
ABIE40_RS23630: ABIE40_RS23630 - DUF1236 domain-containing protein, at 871,559 to 872,326
_RS23630
ABIE40_RS23635: ABIE40_RS23635 - hypothetical protein, at 872,378 to 872,542
_RS23635
ABIE40_RS23640: ABIE40_RS23640 - BA14K family protein, at 872,539 to 873,144
_RS23640
ABIE40_RS23645: ABIE40_RS23645 - hypothetical protein, at 873,220 to 873,543
_RS23645
Position (kb) 872
873 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 871.608 kb on + strand at 871.608 kb on + strand at 871.608 kb on + strand at 871.609 kb on - strand at 871.609 kb on - strand at 871.609 kb on - strand at 871.609 kb on - strand at 872.045 kb on - strand, within ABIE40_RS23630 at 872.045 kb on - strand, within ABIE40_RS23630 at 872.227 kb on - strand, within ABIE40_RS23630 at 872.234 kb on + strand, within ABIE40_RS23630 at 872.244 kb on - strand, within ABIE40_RS23630 at 872.297 kb on + strand at 872.309 kb on + strand at 872.309 kb on + strand at 872.309 kb on + strand at 872.309 kb on + strand at 872.309 kb on + strand at 872.310 kb on - strand at 872.310 kb on - strand at 872.310 kb on - strand at 872.385 kb on - strand at 872.505 kb on + strand, within ABIE40_RS23635 at 872.506 kb on - strand, within ABIE40_RS23635 at 872.716 kb on + strand, within ABIE40_RS23640 at 872.717 kb on - strand, within ABIE40_RS23640 at 872.717 kb on - strand, within ABIE40_RS23640 at 872.737 kb on + strand, within ABIE40_RS23640 at 872.746 kb on + strand, within ABIE40_RS23640 at 872.746 kb on + strand, within ABIE40_RS23640 at 872.747 kb on - strand, within ABIE40_RS23640 at 872.747 kb on - strand, within ABIE40_RS23640 at 872.747 kb on - strand, within ABIE40_RS23640 at 872.747 kb on - strand, within ABIE40_RS23640 at 872.867 kb on - strand, within ABIE40_RS23640 at 872.876 kb on - strand, within ABIE40_RS23640 at 872.896 kb on + strand, within ABIE40_RS23640 at 872.897 kb on - strand, within ABIE40_RS23640 at 873.053 kb on - strand, within ABIE40_RS23640 at 873.053 kb on - strand, within ABIE40_RS23640 at 873.053 kb on - strand, within ABIE40_RS23640 at 873.073 kb on + strand, within ABIE40_RS23640 at 873.073 kb on + strand, within ABIE40_RS23640 at 873.073 kb on + strand, within ABIE40_RS23640 at 873.073 kb on + strand, within ABIE40_RS23640 at 873.073 kb on + strand, within ABIE40_RS23640 at 873.073 kb on + strand, within ABIE40_RS23640 at 873.073 kb on + strand, within ABIE40_RS23640 at 873.074 kb on - strand, within ABIE40_RS23640 at 873.074 kb on - strand, within ABIE40_RS23640 at 873.074 kb on - strand, within ABIE40_RS23640 at 873.137 kb on + strand at 873.137 kb on + strand at 873.137 kb on + strand at 873.189 kb on + strand at 873.190 kb on - strand at 873.190 kb on - strand at 873.190 kb on - strand at 873.190 kb on - strand at 873.214 kb on + strand at 873.215 kb on - strand at 873.309 kb on + strand, within ABIE40_RS23645 at 873.320 kb on - strand, within ABIE40_RS23645 at 873.320 kb on - strand, within ABIE40_RS23645 at 873.331 kb on + strand, within ABIE40_RS23645 at 873.331 kb on + strand, within ABIE40_RS23645 at 873.331 kb on + strand, within ABIE40_RS23645 at 873.332 kb on - strand, within ABIE40_RS23645 at 873.541 kb on + strand at 873.541 kb on + strand at 873.541 kb on + strand at 873.542 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 871,608 + +1.0 871,608 + +0.6 871,608 + -0.1 871,609 - -3.0 871,609 - +0.6 871,609 - -0.3 871,609 - +0.5 872,045 - ABIE40_RS23630 0.63 -1.1 872,045 - ABIE40_RS23630 0.63 +0.4 872,227 - ABIE40_RS23630 0.87 -0.8 872,234 + ABIE40_RS23630 0.88 -1.3 872,244 - ABIE40_RS23630 0.89 +0.6 872,297 + +0.8 872,309 + +0.6 872,309 + +1.1 872,309 + +0.3 872,309 + -0.8 872,309 + -0.4 872,310 - -1.1 872,310 - +0.7 872,310 - -2.5 872,385 - +0.0 872,505 + ABIE40_RS23635 0.77 +2.0 872,506 - ABIE40_RS23635 0.78 +1.5 872,716 + ABIE40_RS23640 0.29 -1.1 872,717 - ABIE40_RS23640 0.29 +1.7 872,717 - ABIE40_RS23640 0.29 -0.9 872,737 + ABIE40_RS23640 0.33 -0.3 872,746 + ABIE40_RS23640 0.34 +0.3 872,746 + ABIE40_RS23640 0.34 -0.8 872,747 - ABIE40_RS23640 0.34 +0.3 872,747 - ABIE40_RS23640 0.34 -0.0 872,747 - ABIE40_RS23640 0.34 -0.4 872,747 - ABIE40_RS23640 0.34 -1.7 872,867 - ABIE40_RS23640 0.54 +2.8 872,876 - ABIE40_RS23640 0.56 -1.0 872,896 + ABIE40_RS23640 0.59 -0.2 872,897 - ABIE40_RS23640 0.59 +0.6 873,053 - ABIE40_RS23640 0.85 -0.5 873,053 - ABIE40_RS23640 0.85 +0.8 873,053 - ABIE40_RS23640 0.85 +0.2 873,073 + ABIE40_RS23640 0.88 +0.1 873,073 + ABIE40_RS23640 0.88 +0.8 873,073 + ABIE40_RS23640 0.88 -0.1 873,073 + ABIE40_RS23640 0.88 -1.7 873,073 + ABIE40_RS23640 0.88 -2.2 873,073 + ABIE40_RS23640 0.88 -0.3 873,073 + ABIE40_RS23640 0.88 +0.1 873,074 - ABIE40_RS23640 0.88 -1.7 873,074 - ABIE40_RS23640 0.88 -0.3 873,074 - ABIE40_RS23640 0.88 -0.2 873,137 + -1.5 873,137 + -1.0 873,137 + -0.3 873,189 + -1.5 873,190 - -1.6 873,190 - +1.4 873,190 - -0.8 873,190 - +1.2 873,214 + -3.5 873,215 - -0.6 873,309 + ABIE40_RS23645 0.27 -0.5 873,320 - ABIE40_RS23645 0.31 +3.5 873,320 - ABIE40_RS23645 0.31 -0.9 873,331 + ABIE40_RS23645 0.34 +0.2 873,331 + ABIE40_RS23645 0.34 -0.3 873,331 + ABIE40_RS23645 0.34 +1.3 873,332 - ABIE40_RS23645 0.35 +0.9 873,541 + -1.0 873,541 + +1.5 873,541 + -1.7 873,542 - -0.5
Or see this region's nucleotide sequence