Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS22810 and ABIE40_RS22815 are separated by 207 nucleotides ABIE40_RS22815 and ABIE40_RS22820 are separated by 5 nucleotides
ABIE40_RS22810: ABIE40_RS22810 - ROK family transcriptional regulator, at 708,836 to 709,975
_RS22810
ABIE40_RS22815: ABIE40_RS22815 - MocE family 2Fe-2S type ferredoxin, at 710,183 to 710,497
_RS22815
ABIE40_RS22820: ABIE40_RS22820 - FAD-dependent oxidoreductase, at 710,503 to 711,726
_RS22820
Position (kb) 710
711 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 709.188 kb on + strand, within ABIE40_RS22810 at 709.189 kb on - strand, within ABIE40_RS22810 at 709.189 kb on - strand, within ABIE40_RS22810 at 709.189 kb on - strand, within ABIE40_RS22810 at 709.249 kb on + strand, within ABIE40_RS22810 at 709.335 kb on + strand, within ABIE40_RS22810 at 709.335 kb on + strand, within ABIE40_RS22810 at 709.335 kb on + strand, within ABIE40_RS22810 at 709.341 kb on + strand, within ABIE40_RS22810 at 709.341 kb on + strand, within ABIE40_RS22810 at 709.341 kb on + strand, within ABIE40_RS22810 at 709.341 kb on + strand, within ABIE40_RS22810 at 709.341 kb on + strand, within ABIE40_RS22810 at 709.341 kb on + strand, within ABIE40_RS22810 at 709.341 kb on + strand, within ABIE40_RS22810 at 709.341 kb on + strand, within ABIE40_RS22810 at 709.341 kb on + strand, within ABIE40_RS22810 at 709.342 kb on - strand, within ABIE40_RS22810 at 709.342 kb on - strand, within ABIE40_RS22810 at 709.342 kb on - strand, within ABIE40_RS22810 at 709.344 kb on + strand, within ABIE40_RS22810 at 709.344 kb on + strand, within ABIE40_RS22810 at 709.344 kb on + strand, within ABIE40_RS22810 at 709.345 kb on - strand, within ABIE40_RS22810 at 709.345 kb on - strand, within ABIE40_RS22810 at 709.345 kb on - strand, within ABIE40_RS22810 at 709.345 kb on - strand, within ABIE40_RS22810 at 709.345 kb on - strand, within ABIE40_RS22810 at 709.345 kb on - strand, within ABIE40_RS22810 at 709.347 kb on + strand, within ABIE40_RS22810 at 709.347 kb on + strand, within ABIE40_RS22810 at 709.348 kb on - strand, within ABIE40_RS22810 at 709.375 kb on - strand, within ABIE40_RS22810 at 709.375 kb on - strand, within ABIE40_RS22810 at 709.664 kb on - strand, within ABIE40_RS22810 at 709.729 kb on - strand, within ABIE40_RS22810 at 709.729 kb on - strand, within ABIE40_RS22810 at 709.729 kb on - strand, within ABIE40_RS22810 at 709.806 kb on + strand, within ABIE40_RS22810 at 709.806 kb on + strand, within ABIE40_RS22810 at 709.806 kb on + strand, within ABIE40_RS22810 at 709.806 kb on + strand, within ABIE40_RS22810 at 709.806 kb on + strand, within ABIE40_RS22810 at 709.807 kb on - strand, within ABIE40_RS22810 at 709.807 kb on - strand, within ABIE40_RS22810 at 709.807 kb on - strand, within ABIE40_RS22810 at 709.807 kb on - strand, within ABIE40_RS22810 at 709.807 kb on - strand, within ABIE40_RS22810 at 709.924 kb on + strand at 709.925 kb on - strand at 709.935 kb on + strand at 709.935 kb on + strand at 709.936 kb on - strand at 709.936 kb on - strand at 709.960 kb on + strand at 710.145 kb on - strand at 710.145 kb on - strand at 710.274 kb on - strand, within ABIE40_RS22815 at 710.383 kb on + strand, within ABIE40_RS22815 at 710.384 kb on - strand, within ABIE40_RS22815 at 710.400 kb on - strand, within ABIE40_RS22815 at 710.481 kb on - strand at 710.649 kb on + strand, within ABIE40_RS22820 at 710.649 kb on + strand, within ABIE40_RS22820 at 710.649 kb on + strand, within ABIE40_RS22820 at 710.649 kb on + strand, within ABIE40_RS22820 at 710.650 kb on - strand, within ABIE40_RS22820 at 710.650 kb on - strand, within ABIE40_RS22820 at 710.650 kb on - strand, within ABIE40_RS22820 at 710.650 kb on - strand, within ABIE40_RS22820 at 710.650 kb on - strand, within ABIE40_RS22820 at 710.650 kb on - strand, within ABIE40_RS22820 at 710.718 kb on - strand, within ABIE40_RS22820 at 710.801 kb on - strand, within ABIE40_RS22820 at 710.875 kb on + strand, within ABIE40_RS22820 at 710.875 kb on + strand, within ABIE40_RS22820 at 710.876 kb on - strand, within ABIE40_RS22820 at 710.876 kb on - strand, within ABIE40_RS22820 at 710.876 kb on - strand, within ABIE40_RS22820 at 710.876 kb on - strand, within ABIE40_RS22820 at 710.876 kb on - strand, within ABIE40_RS22820 at 711.086 kb on + strand, within ABIE40_RS22820 at 711.091 kb on - strand, within ABIE40_RS22820 at 711.139 kb on - strand, within ABIE40_RS22820 at 711.139 kb on - strand, within ABIE40_RS22820 at 711.252 kb on + strand, within ABIE40_RS22820 at 711.252 kb on + strand, within ABIE40_RS22820 at 711.253 kb on - strand, within ABIE40_RS22820 at 711.340 kb on + strand, within ABIE40_RS22820 at 711.341 kb on - strand, within ABIE40_RS22820 at 711.351 kb on + strand, within ABIE40_RS22820 at 711.351 kb on + strand, within ABIE40_RS22820 at 711.352 kb on - strand, within ABIE40_RS22820
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 709,188 + ABIE40_RS22810 0.31 -0.9 709,189 - ABIE40_RS22810 0.31 -0.3 709,189 - ABIE40_RS22810 0.31 +0.9 709,189 - ABIE40_RS22810 0.31 -1.3 709,249 + ABIE40_RS22810 0.36 -0.1 709,335 + ABIE40_RS22810 0.44 -1.4 709,335 + ABIE40_RS22810 0.44 -0.8 709,335 + ABIE40_RS22810 0.44 +0.1 709,341 + ABIE40_RS22810 0.44 -1.1 709,341 + ABIE40_RS22810 0.44 +0.6 709,341 + ABIE40_RS22810 0.44 +1.4 709,341 + ABIE40_RS22810 0.44 -0.5 709,341 + ABIE40_RS22810 0.44 -1.5 709,341 + ABIE40_RS22810 0.44 -0.2 709,341 + ABIE40_RS22810 0.44 +0.4 709,341 + ABIE40_RS22810 0.44 +0.2 709,341 + ABIE40_RS22810 0.44 +0.4 709,342 - ABIE40_RS22810 0.44 +0.4 709,342 - ABIE40_RS22810 0.44 +0.5 709,342 - ABIE40_RS22810 0.44 -0.7 709,344 + ABIE40_RS22810 0.45 +0.3 709,344 + ABIE40_RS22810 0.45 +0.0 709,344 + ABIE40_RS22810 0.45 +0.1 709,345 - ABIE40_RS22810 0.45 -0.1 709,345 - ABIE40_RS22810 0.45 -1.5 709,345 - ABIE40_RS22810 0.45 +0.1 709,345 - ABIE40_RS22810 0.45 -1.5 709,345 - ABIE40_RS22810 0.45 -1.1 709,345 - ABIE40_RS22810 0.45 -0.7 709,347 + ABIE40_RS22810 0.45 +1.5 709,347 + ABIE40_RS22810 0.45 +0.1 709,348 - ABIE40_RS22810 0.45 +0.9 709,375 - ABIE40_RS22810 0.47 -0.6 709,375 - ABIE40_RS22810 0.47 -0.5 709,664 - ABIE40_RS22810 0.73 +0.9 709,729 - ABIE40_RS22810 0.78 +0.5 709,729 - ABIE40_RS22810 0.78 +0.7 709,729 - ABIE40_RS22810 0.78 +0.4 709,806 + ABIE40_RS22810 0.85 +2.2 709,806 + ABIE40_RS22810 0.85 +0.3 709,806 + ABIE40_RS22810 0.85 +0.9 709,806 + ABIE40_RS22810 0.85 -3.1 709,806 + ABIE40_RS22810 0.85 +2.2 709,807 - ABIE40_RS22810 0.85 -0.2 709,807 - ABIE40_RS22810 0.85 +3.9 709,807 - ABIE40_RS22810 0.85 +0.4 709,807 - ABIE40_RS22810 0.85 +0.2 709,807 - ABIE40_RS22810 0.85 -0.2 709,924 + -0.0 709,925 - +1.9 709,935 + +1.1 709,935 + -0.3 709,936 - +3.3 709,936 - +1.5 709,960 + +0.2 710,145 - +1.9 710,145 - -0.4 710,274 - ABIE40_RS22815 0.29 +0.6 710,383 + ABIE40_RS22815 0.63 +0.1 710,384 - ABIE40_RS22815 0.64 +0.4 710,400 - ABIE40_RS22815 0.69 +0.7 710,481 - +0.3 710,649 + ABIE40_RS22820 0.12 +0.2 710,649 + ABIE40_RS22820 0.12 +0.6 710,649 + ABIE40_RS22820 0.12 +1.7 710,649 + ABIE40_RS22820 0.12 -0.4 710,650 - ABIE40_RS22820 0.12 +0.3 710,650 - ABIE40_RS22820 0.12 +2.9 710,650 - ABIE40_RS22820 0.12 +0.4 710,650 - ABIE40_RS22820 0.12 -0.3 710,650 - ABIE40_RS22820 0.12 -2.0 710,650 - ABIE40_RS22820 0.12 +0.2 710,718 - ABIE40_RS22820 0.18 +1.0 710,801 - ABIE40_RS22820 0.24 +0.6 710,875 + ABIE40_RS22820 0.30 -0.7 710,875 + ABIE40_RS22820 0.30 +0.8 710,876 - ABIE40_RS22820 0.30 -0.5 710,876 - ABIE40_RS22820 0.30 -0.4 710,876 - ABIE40_RS22820 0.30 +1.5 710,876 - ABIE40_RS22820 0.30 +2.3 710,876 - ABIE40_RS22820 0.30 +0.6 711,086 + ABIE40_RS22820 0.48 -0.7 711,091 - ABIE40_RS22820 0.48 +0.4 711,139 - ABIE40_RS22820 0.52 -0.1 711,139 - ABIE40_RS22820 0.52 +0.4 711,252 + ABIE40_RS22820 0.61 +0.0 711,252 + ABIE40_RS22820 0.61 +1.0 711,253 - ABIE40_RS22820 0.61 -0.1 711,340 + ABIE40_RS22820 0.68 -1.1 711,341 - ABIE40_RS22820 0.68 -2.6 711,351 + ABIE40_RS22820 0.69 -0.1 711,351 + ABIE40_RS22820 0.69 -2.0 711,352 - ABIE40_RS22820 0.69 -0.9
Or see this region's nucleotide sequence