Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS22410 and ABIE40_RS22415 are separated by 53 nucleotides ABIE40_RS22415 and ABIE40_RS22420 overlap by 4 nucleotides ABIE40_RS22420 and ABIE40_RS22425 are separated by 3 nucleotides
ABIE40_RS22410: ABIE40_RS22410 - extracellular solute-binding protein, at 613,555 to 614,730
_RS22410
ABIE40_RS22415: ABIE40_RS22415 - ABC transporter ATP-binding protein, at 614,784 to 615,890
_RS22415
ABIE40_RS22420: ABIE40_RS22420 - sugar ABC transporter permease, at 615,887 to 616,768
_RS22420
ABIE40_RS22425: ABIE40_RS22425 - ABC transporter permease subunit, at 616,772 to 617,614
_RS22425
Position (kb) 614
615
616 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 613.999 kb on + strand, within ABIE40_RS22410 at 613.999 kb on + strand, within ABIE40_RS22410 at 613.999 kb on + strand, within ABIE40_RS22410 at 613.999 kb on + strand, within ABIE40_RS22410 at 613.999 kb on + strand, within ABIE40_RS22410 at 613.999 kb on + strand, within ABIE40_RS22410 at 614.000 kb on - strand, within ABIE40_RS22410 at 614.000 kb on - strand, within ABIE40_RS22410 at 614.000 kb on - strand, within ABIE40_RS22410 at 614.000 kb on - strand, within ABIE40_RS22410 at 614.000 kb on - strand, within ABIE40_RS22410 at 614.000 kb on - strand, within ABIE40_RS22410 at 614.026 kb on + strand, within ABIE40_RS22410 at 614.026 kb on + strand, within ABIE40_RS22410 at 614.026 kb on + strand, within ABIE40_RS22410 at 614.027 kb on - strand, within ABIE40_RS22410 at 614.028 kb on + strand, within ABIE40_RS22410 at 614.028 kb on + strand, within ABIE40_RS22410 at 614.028 kb on + strand, within ABIE40_RS22410 at 614.029 kb on - strand, within ABIE40_RS22410 at 614.029 kb on - strand, within ABIE40_RS22410 at 614.111 kb on - strand, within ABIE40_RS22410 at 614.165 kb on - strand, within ABIE40_RS22410 at 614.225 kb on - strand, within ABIE40_RS22410 at 614.225 kb on - strand, within ABIE40_RS22410 at 614.225 kb on - strand, within ABIE40_RS22410 at 614.225 kb on - strand, within ABIE40_RS22410 at 614.225 kb on - strand, within ABIE40_RS22410 at 614.254 kb on + strand, within ABIE40_RS22410 at 614.255 kb on - strand, within ABIE40_RS22410 at 614.255 kb on - strand, within ABIE40_RS22410 at 614.255 kb on - strand, within ABIE40_RS22410 at 614.255 kb on - strand, within ABIE40_RS22410 at 614.257 kb on + strand, within ABIE40_RS22410 at 614.258 kb on - strand, within ABIE40_RS22410 at 614.338 kb on - strand, within ABIE40_RS22410 at 614.422 kb on + strand, within ABIE40_RS22410 at 614.423 kb on - strand, within ABIE40_RS22410 at 614.485 kb on + strand, within ABIE40_RS22410 at 614.485 kb on + strand, within ABIE40_RS22410 at 614.485 kb on + strand, within ABIE40_RS22410 at 614.485 kb on + strand, within ABIE40_RS22410 at 614.486 kb on - strand, within ABIE40_RS22410 at 614.486 kb on - strand, within ABIE40_RS22410 at 614.486 kb on - strand, within ABIE40_RS22410 at 614.486 kb on - strand, within ABIE40_RS22410 at 614.623 kb on + strand at 614.623 kb on + strand at 614.623 kb on + strand at 614.623 kb on + strand at 614.623 kb on + strand at 614.624 kb on - strand at 614.783 kb on + strand at 614.783 kb on + strand at 614.783 kb on + strand at 614.783 kb on + strand at 614.783 kb on + strand at 614.784 kb on - strand at 614.784 kb on - strand at 614.784 kb on - strand at 614.784 kb on - strand at 614.784 kb on - strand at 614.784 kb on - strand at 614.883 kb on + strand at 614.884 kb on - strand at 614.884 kb on - strand at 614.885 kb on + strand at 614.886 kb on - strand at 614.981 kb on + strand, within ABIE40_RS22415 at 614.981 kb on + strand, within ABIE40_RS22415 at 614.981 kb on + strand, within ABIE40_RS22415 at 614.982 kb on - strand, within ABIE40_RS22415 at 614.982 kb on - strand, within ABIE40_RS22415 at 614.982 kb on - strand, within ABIE40_RS22415 at 615.087 kb on + strand, within ABIE40_RS22415 at 615.088 kb on - strand, within ABIE40_RS22415 at 615.088 kb on - strand, within ABIE40_RS22415 at 615.088 kb on - strand, within ABIE40_RS22415 at 615.088 kb on - strand, within ABIE40_RS22415 at 615.088 kb on - strand, within ABIE40_RS22415 at 615.104 kb on + strand, within ABIE40_RS22415 at 615.104 kb on + strand, within ABIE40_RS22415 at 615.105 kb on - strand, within ABIE40_RS22415 at 615.402 kb on + strand, within ABIE40_RS22415 at 615.403 kb on - strand, within ABIE40_RS22415 at 615.403 kb on - strand, within ABIE40_RS22415 at 615.470 kb on + strand, within ABIE40_RS22415 at 615.501 kb on + strand, within ABIE40_RS22415 at 615.502 kb on - strand, within ABIE40_RS22415 at 615.502 kb on - strand, within ABIE40_RS22415 at 615.536 kb on + strand, within ABIE40_RS22415 at 615.741 kb on + strand, within ABIE40_RS22415 at 615.741 kb on + strand, within ABIE40_RS22415 at 615.795 kb on + strand at 615.796 kb on - strand at 615.989 kb on + strand, within ABIE40_RS22420 at 615.990 kb on - strand, within ABIE40_RS22420 at 615.990 kb on - strand, within ABIE40_RS22420 at 615.990 kb on - strand, within ABIE40_RS22420 at 616.046 kb on + strand, within ABIE40_RS22420 at 616.047 kb on - strand, within ABIE40_RS22420 at 616.047 kb on - strand, within ABIE40_RS22420 at 616.055 kb on + strand, within ABIE40_RS22420 at 616.055 kb on + strand, within ABIE40_RS22420 at 616.085 kb on + strand, within ABIE40_RS22420 at 616.085 kb on + strand, within ABIE40_RS22420 at 616.085 kb on + strand, within ABIE40_RS22420 at 616.086 kb on - strand, within ABIE40_RS22420 at 616.343 kb on + strand, within ABIE40_RS22420 at 616.343 kb on + strand, within ABIE40_RS22420 at 616.343 kb on + strand, within ABIE40_RS22420 at 616.344 kb on - strand, within ABIE40_RS22420 at 616.344 kb on - strand, within ABIE40_RS22420 at 616.344 kb on - strand, within ABIE40_RS22420 at 616.409 kb on + strand, within ABIE40_RS22420 at 616.409 kb on + strand, within ABIE40_RS22420 at 616.409 kb on + strand, within ABIE40_RS22420 at 616.409 kb on + strand, within ABIE40_RS22420 at 616.409 kb on + strand, within ABIE40_RS22420 at 616.410 kb on - strand, within ABIE40_RS22420 at 616.410 kb on - strand, within ABIE40_RS22420 at 616.411 kb on + strand, within ABIE40_RS22420 at 616.411 kb on + strand, within ABIE40_RS22420 at 616.411 kb on + strand, within ABIE40_RS22420 at 616.412 kb on - strand, within ABIE40_RS22420 at 616.412 kb on - strand, within ABIE40_RS22420 at 616.412 kb on - strand, within ABIE40_RS22420 at 616.412 kb on - strand, within ABIE40_RS22420 at 616.622 kb on + strand, within ABIE40_RS22420 at 616.623 kb on - strand, within ABIE40_RS22420 at 616.643 kb on + strand, within ABIE40_RS22420 at 616.643 kb on + strand, within ABIE40_RS22420 at 616.643 kb on + strand, within ABIE40_RS22420 at 616.643 kb on + strand, within ABIE40_RS22420 at 616.643 kb on + strand, within ABIE40_RS22420 at 616.643 kb on + strand, within ABIE40_RS22420 at 616.643 kb on + strand, within ABIE40_RS22420 at 616.644 kb on - strand, within ABIE40_RS22420 at 616.644 kb on - strand, within ABIE40_RS22420 at 616.644 kb on - strand, within ABIE40_RS22420 at 616.644 kb on - strand, within ABIE40_RS22420 at 616.736 kb on + strand at 616.737 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 613,999 + ABIE40_RS22410 0.38 -1.8 613,999 + ABIE40_RS22410 0.38 -4.4 613,999 + ABIE40_RS22410 0.38 -3.8 613,999 + ABIE40_RS22410 0.38 -3.6 613,999 + ABIE40_RS22410 0.38 -2.7 613,999 + ABIE40_RS22410 0.38 -5.3 614,000 - ABIE40_RS22410 0.38 -3.3 614,000 - ABIE40_RS22410 0.38 -2.6 614,000 - ABIE40_RS22410 0.38 -1.8 614,000 - ABIE40_RS22410 0.38 -1.7 614,000 - ABIE40_RS22410 0.38 -0.6 614,000 - ABIE40_RS22410 0.38 -2.8 614,026 + ABIE40_RS22410 0.40 -3.0 614,026 + ABIE40_RS22410 0.40 -0.9 614,026 + ABIE40_RS22410 0.40 -0.8 614,027 - ABIE40_RS22410 0.40 -4.0 614,028 + ABIE40_RS22410 0.40 -4.4 614,028 + ABIE40_RS22410 0.40 -4.3 614,028 + ABIE40_RS22410 0.40 -3.2 614,029 - ABIE40_RS22410 0.40 -4.9 614,029 - ABIE40_RS22410 0.40 -3.2 614,111 - ABIE40_RS22410 0.47 -3.9 614,165 - ABIE40_RS22410 0.52 -4.2 614,225 - ABIE40_RS22410 0.57 -4.6 614,225 - ABIE40_RS22410 0.57 -4.2 614,225 - ABIE40_RS22410 0.57 -2.7 614,225 - ABIE40_RS22410 0.57 -2.2 614,225 - ABIE40_RS22410 0.57 -4.8 614,254 + ABIE40_RS22410 0.59 -3.5 614,255 - ABIE40_RS22410 0.60 -2.2 614,255 - ABIE40_RS22410 0.60 -3.7 614,255 - ABIE40_RS22410 0.60 -3.2 614,255 - ABIE40_RS22410 0.60 -4.5 614,257 + ABIE40_RS22410 0.60 -4.3 614,258 - ABIE40_RS22410 0.60 -5.2 614,338 - ABIE40_RS22410 0.67 -0.9 614,422 + ABIE40_RS22410 0.74 -3.2 614,423 - ABIE40_RS22410 0.74 -4.2 614,485 + ABIE40_RS22410 0.79 -1.9 614,485 + ABIE40_RS22410 0.79 -4.2 614,485 + ABIE40_RS22410 0.79 -4.3 614,485 + ABIE40_RS22410 0.79 -3.3 614,486 - ABIE40_RS22410 0.79 -2.0 614,486 - ABIE40_RS22410 0.79 -3.5 614,486 - ABIE40_RS22410 0.79 -0.8 614,486 - ABIE40_RS22410 0.79 -0.8 614,623 + -4.1 614,623 + +1.0 614,623 + -4.5 614,623 + -1.3 614,623 + -2.0 614,624 - -4.2 614,783 + -1.4 614,783 + -0.6 614,783 + -3.0 614,783 + -1.2 614,783 + +0.9 614,784 - -3.0 614,784 - -2.9 614,784 - -3.8 614,784 - -5.2 614,784 - -2.7 614,784 - -5.5 614,883 + -2.6 614,884 - -2.9 614,884 - -3.5 614,885 + -2.2 614,886 - -0.8 614,981 + ABIE40_RS22415 0.18 -4.1 614,981 + ABIE40_RS22415 0.18 -1.5 614,981 + ABIE40_RS22415 0.18 -0.2 614,982 - ABIE40_RS22415 0.18 -2.1 614,982 - ABIE40_RS22415 0.18 -2.7 614,982 - ABIE40_RS22415 0.18 -2.5 615,087 + ABIE40_RS22415 0.27 -1.8 615,088 - ABIE40_RS22415 0.27 -4.3 615,088 - ABIE40_RS22415 0.27 -1.8 615,088 - ABIE40_RS22415 0.27 -1.7 615,088 - ABIE40_RS22415 0.27 -2.4 615,088 - ABIE40_RS22415 0.27 -1.7 615,104 + ABIE40_RS22415 0.29 -3.5 615,104 + ABIE40_RS22415 0.29 -3.4 615,105 - ABIE40_RS22415 0.29 -5.4 615,402 + ABIE40_RS22415 0.56 -4.7 615,403 - ABIE40_RS22415 0.56 -3.4 615,403 - ABIE40_RS22415 0.56 -2.5 615,470 + ABIE40_RS22415 0.62 -2.6 615,501 + ABIE40_RS22415 0.65 -4.1 615,502 - ABIE40_RS22415 0.65 -4.6 615,502 - ABIE40_RS22415 0.65 +2.0 615,536 + ABIE40_RS22415 0.68 -3.6 615,741 + ABIE40_RS22415 0.86 -3.2 615,741 + ABIE40_RS22415 0.86 -2.6 615,795 + -2.2 615,796 - -4.0 615,989 + ABIE40_RS22420 0.12 -3.0 615,990 - ABIE40_RS22420 0.12 -3.4 615,990 - ABIE40_RS22420 0.12 -0.3 615,990 - ABIE40_RS22420 0.12 -5.5 616,046 + ABIE40_RS22420 0.18 +0.5 616,047 - ABIE40_RS22420 0.18 -5.3 616,047 - ABIE40_RS22420 0.18 -1.2 616,055 + ABIE40_RS22420 0.19 -3.4 616,055 + ABIE40_RS22420 0.19 -3.6 616,085 + ABIE40_RS22420 0.22 -2.8 616,085 + ABIE40_RS22420 0.22 -3.3 616,085 + ABIE40_RS22420 0.22 -4.9 616,086 - ABIE40_RS22420 0.23 -1.7 616,343 + ABIE40_RS22420 0.52 -3.7 616,343 + ABIE40_RS22420 0.52 -4.6 616,343 + ABIE40_RS22420 0.52 -1.3 616,344 - ABIE40_RS22420 0.52 -3.9 616,344 - ABIE40_RS22420 0.52 -2.6 616,344 - ABIE40_RS22420 0.52 -1.5 616,409 + ABIE40_RS22420 0.59 -0.2 616,409 + ABIE40_RS22420 0.59 -2.7 616,409 + ABIE40_RS22420 0.59 +0.4 616,409 + ABIE40_RS22420 0.59 -5.2 616,409 + ABIE40_RS22420 0.59 -3.3 616,410 - ABIE40_RS22420 0.59 -5.4 616,410 - ABIE40_RS22420 0.59 -5.1 616,411 + ABIE40_RS22420 0.59 -2.6 616,411 + ABIE40_RS22420 0.59 -3.4 616,411 + ABIE40_RS22420 0.59 -1.2 616,412 - ABIE40_RS22420 0.60 -1.2 616,412 - ABIE40_RS22420 0.60 -3.2 616,412 - ABIE40_RS22420 0.60 -5.1 616,412 - ABIE40_RS22420 0.60 -2.3 616,622 + ABIE40_RS22420 0.83 -1.0 616,623 - ABIE40_RS22420 0.83 -4.0 616,643 + ABIE40_RS22420 0.86 -3.5 616,643 + ABIE40_RS22420 0.86 -2.1 616,643 + ABIE40_RS22420 0.86 -3.0 616,643 + ABIE40_RS22420 0.86 -1.9 616,643 + ABIE40_RS22420 0.86 -2.0 616,643 + ABIE40_RS22420 0.86 -2.0 616,643 + ABIE40_RS22420 0.86 -1.5 616,644 - ABIE40_RS22420 0.86 -5.7 616,644 - ABIE40_RS22420 0.86 -3.1 616,644 - ABIE40_RS22420 0.86 -2.9 616,644 - ABIE40_RS22420 0.86 -1.8 616,736 + +2.0 616,737 - -1.6
Or see this region's nucleotide sequence