Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS20040 and ABIE40_RS20045 are separated by 2 nucleotides ABIE40_RS20045 and ABIE40_RS20050 are separated by 64 nucleotides ABIE40_RS20050 and ABIE40_RS20055 are separated by 94 nucleotides
ABIE40_RS20040: ABIE40_RS20040 - carbohydrate ABC transporter permease, at 108,143 to 109,030
_RS20040
ABIE40_RS20045: ABIE40_RS20045 - sugar ABC transporter permease, at 109,033 to 109,941
_RS20045
ABIE40_RS20050: ABIE40_RS20050 - extracellular solute-binding protein, at 110,006 to 111,268
_RS20050
ABIE40_RS20055: ABIE40_RS20055 - sugar phosphate isomerase/epimerase, at 111,363 to 112,265
_RS20055
Position (kb) 110
111
112 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 109.031 kb on - strand at 109.031 kb on - strand at 109.034 kb on + strand at 109.034 kb on + strand at 109.035 kb on - strand at 109.035 kb on - strand at 109.035 kb on - strand at 109.147 kb on - strand, within ABIE40_RS20045 at 109.157 kb on + strand, within ABIE40_RS20045 at 109.157 kb on + strand, within ABIE40_RS20045 at 109.157 kb on + strand, within ABIE40_RS20045 at 109.158 kb on - strand, within ABIE40_RS20045 at 109.158 kb on - strand, within ABIE40_RS20045 at 109.160 kb on + strand, within ABIE40_RS20045 at 109.160 kb on + strand, within ABIE40_RS20045 at 109.160 kb on + strand, within ABIE40_RS20045 at 109.161 kb on - strand, within ABIE40_RS20045 at 109.161 kb on - strand, within ABIE40_RS20045 at 109.169 kb on + strand, within ABIE40_RS20045 at 109.170 kb on - strand, within ABIE40_RS20045 at 109.248 kb on + strand, within ABIE40_RS20045 at 109.248 kb on + strand, within ABIE40_RS20045 at 109.248 kb on + strand, within ABIE40_RS20045 at 109.249 kb on - strand, within ABIE40_RS20045 at 109.352 kb on + strand, within ABIE40_RS20045 at 109.415 kb on - strand, within ABIE40_RS20045 at 109.451 kb on + strand, within ABIE40_RS20045 at 109.451 kb on + strand, within ABIE40_RS20045 at 109.452 kb on - strand, within ABIE40_RS20045 at 109.589 kb on + strand, within ABIE40_RS20045 at 109.643 kb on + strand, within ABIE40_RS20045 at 109.643 kb on + strand, within ABIE40_RS20045 at 109.643 kb on + strand, within ABIE40_RS20045 at 109.644 kb on - strand, within ABIE40_RS20045 at 109.725 kb on - strand, within ABIE40_RS20045 at 109.725 kb on - strand, within ABIE40_RS20045 at 109.725 kb on - strand, within ABIE40_RS20045 at 109.725 kb on - strand, within ABIE40_RS20045 at 109.729 kb on - strand, within ABIE40_RS20045 at 109.765 kb on - strand, within ABIE40_RS20045 at 109.766 kb on + strand, within ABIE40_RS20045 at 109.766 kb on + strand, within ABIE40_RS20045 at 109.766 kb on + strand, within ABIE40_RS20045 at 109.766 kb on + strand, within ABIE40_RS20045 at 109.766 kb on + strand, within ABIE40_RS20045 at 109.766 kb on + strand, within ABIE40_RS20045 at 109.766 kb on + strand, within ABIE40_RS20045 at 109.766 kb on + strand, within ABIE40_RS20045 at 109.767 kb on - strand, within ABIE40_RS20045 at 109.767 kb on - strand, within ABIE40_RS20045 at 109.852 kb on + strand at 109.852 kb on + strand at 109.852 kb on + strand at 109.853 kb on - strand at 109.853 kb on - strand at 109.890 kb on - strand at 109.890 kb on - strand at 109.890 kb on - strand at 109.896 kb on + strand at 109.896 kb on + strand at 109.897 kb on - strand at 109.897 kb on - strand at 109.898 kb on + strand at 109.898 kb on + strand at 109.898 kb on + strand at 109.898 kb on + strand at 109.898 kb on + strand at 109.898 kb on + strand at 109.898 kb on + strand at 109.899 kb on - strand at 109.899 kb on - strand at 109.899 kb on - strand at 109.899 kb on - strand at 109.899 kb on - strand at 109.964 kb on - strand at 110.115 kb on + strand at 110.115 kb on + strand at 110.115 kb on + strand at 110.115 kb on + strand at 110.115 kb on + strand at 110.115 kb on + strand at 110.115 kb on + strand at 110.115 kb on + strand at 110.116 kb on - strand at 110.116 kb on - strand at 110.116 kb on - strand at 110.272 kb on - strand, within ABIE40_RS20050 at 110.272 kb on - strand, within ABIE40_RS20050 at 110.272 kb on - strand, within ABIE40_RS20050 at 110.272 kb on - strand, within ABIE40_RS20050 at 110.457 kb on + strand, within ABIE40_RS20050 at 110.457 kb on + strand, within ABIE40_RS20050 at 110.457 kb on + strand, within ABIE40_RS20050 at 110.457 kb on + strand, within ABIE40_RS20050 at 110.457 kb on + strand, within ABIE40_RS20050 at 110.457 kb on + strand, within ABIE40_RS20050 at 110.457 kb on + strand, within ABIE40_RS20050 at 110.457 kb on + strand, within ABIE40_RS20050 at 110.458 kb on - strand, within ABIE40_RS20050 at 110.458 kb on - strand, within ABIE40_RS20050 at 110.458 kb on - strand, within ABIE40_RS20050 at 110.458 kb on - strand, within ABIE40_RS20050 at 110.458 kb on - strand, within ABIE40_RS20050 at 110.458 kb on - strand, within ABIE40_RS20050 at 110.532 kb on + strand, within ABIE40_RS20050 at 110.571 kb on + strand, within ABIE40_RS20050 at 110.577 kb on + strand, within ABIE40_RS20050 at 110.613 kb on + strand, within ABIE40_RS20050 at 110.613 kb on + strand, within ABIE40_RS20050 at 110.613 kb on + strand, within ABIE40_RS20050 at 110.613 kb on + strand, within ABIE40_RS20050 at 110.613 kb on + strand, within ABIE40_RS20050 at 110.613 kb on + strand, within ABIE40_RS20050 at 110.614 kb on - strand, within ABIE40_RS20050 at 110.614 kb on - strand, within ABIE40_RS20050 at 110.614 kb on - strand, within ABIE40_RS20050 at 110.630 kb on - strand, within ABIE40_RS20050 at 110.644 kb on + strand, within ABIE40_RS20050 at 110.644 kb on + strand, within ABIE40_RS20050 at 110.644 kb on + strand, within ABIE40_RS20050 at 110.645 kb on - strand, within ABIE40_RS20050 at 110.645 kb on - strand, within ABIE40_RS20050 at 110.645 kb on - strand, within ABIE40_RS20050 at 110.646 kb on + strand, within ABIE40_RS20050 at 110.646 kb on + strand, within ABIE40_RS20050 at 110.647 kb on - strand, within ABIE40_RS20050 at 110.791 kb on + strand, within ABIE40_RS20050 at 110.791 kb on + strand, within ABIE40_RS20050 at 110.791 kb on + strand, within ABIE40_RS20050 at 110.792 kb on - strand, within ABIE40_RS20050 at 110.792 kb on - strand, within ABIE40_RS20050 at 110.792 kb on - strand, within ABIE40_RS20050 at 110.792 kb on - strand, within ABIE40_RS20050 at 110.802 kb on + strand, within ABIE40_RS20050 at 110.802 kb on + strand, within ABIE40_RS20050 at 110.802 kb on + strand, within ABIE40_RS20050 at 110.802 kb on + strand, within ABIE40_RS20050 at 110.802 kb on + strand, within ABIE40_RS20050 at 110.803 kb on - strand, within ABIE40_RS20050 at 110.803 kb on - strand, within ABIE40_RS20050 at 110.803 kb on - strand, within ABIE40_RS20050 at 110.817 kb on + strand, within ABIE40_RS20050 at 110.817 kb on + strand, within ABIE40_RS20050 at 110.817 kb on + strand, within ABIE40_RS20050 at 110.817 kb on + strand, within ABIE40_RS20050 at 110.818 kb on - strand, within ABIE40_RS20050 at 110.818 kb on - strand, within ABIE40_RS20050 at 110.818 kb on - strand, within ABIE40_RS20050 at 110.818 kb on - strand, within ABIE40_RS20050 at 110.859 kb on + strand, within ABIE40_RS20050 at 110.859 kb on + strand, within ABIE40_RS20050 at 110.859 kb on + strand, within ABIE40_RS20050 at 110.859 kb on + strand, within ABIE40_RS20050 at 110.860 kb on - strand, within ABIE40_RS20050 at 110.860 kb on - strand, within ABIE40_RS20050 at 110.860 kb on - strand, within ABIE40_RS20050 at 110.938 kb on - strand, within ABIE40_RS20050 at 110.938 kb on - strand, within ABIE40_RS20050 at 111.003 kb on + strand, within ABIE40_RS20050 at 111.003 kb on + strand, within ABIE40_RS20050 at 111.003 kb on + strand, within ABIE40_RS20050 at 111.004 kb on - strand, within ABIE40_RS20050 at 111.004 kb on - strand, within ABIE40_RS20050 at 111.004 kb on - strand, within ABIE40_RS20050 at 111.089 kb on - strand, within ABIE40_RS20050 at 111.108 kb on + strand, within ABIE40_RS20050 at 111.145 kb on + strand at 111.145 kb on + strand at 111.145 kb on + strand at 111.145 kb on + strand at 111.146 kb on - strand at 111.146 kb on - strand at 111.146 kb on - strand at 111.268 kb on + strand at 111.305 kb on + strand at 111.306 kb on - strand at 111.356 kb on - strand at 111.694 kb on + strand, within ABIE40_RS20055 at 111.694 kb on + strand, within ABIE40_RS20055 at 111.694 kb on + strand, within ABIE40_RS20055 at 111.732 kb on - strand, within ABIE40_RS20055 at 111.942 kb on - strand, within ABIE40_RS20055 at 112.191 kb on + strand at 112.192 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 109,031 - -0.5 109,031 - -2.1 109,034 + +0.6 109,034 + +0.5 109,035 - +1.0 109,035 - +0.2 109,035 - +0.1 109,147 - ABIE40_RS20045 0.13 -0.9 109,157 + ABIE40_RS20045 0.14 -0.4 109,157 + ABIE40_RS20045 0.14 +0.3 109,157 + ABIE40_RS20045 0.14 -0.1 109,158 - ABIE40_RS20045 0.14 -1.4 109,158 - ABIE40_RS20045 0.14 +0.3 109,160 + ABIE40_RS20045 0.14 +1.8 109,160 + ABIE40_RS20045 0.14 +1.3 109,160 + ABIE40_RS20045 0.14 +0.5 109,161 - ABIE40_RS20045 0.14 -1.2 109,161 - ABIE40_RS20045 0.14 -0.1 109,169 + ABIE40_RS20045 0.15 +0.4 109,170 - ABIE40_RS20045 0.15 +0.4 109,248 + ABIE40_RS20045 0.24 +0.2 109,248 + ABIE40_RS20045 0.24 +1.4 109,248 + ABIE40_RS20045 0.24 -0.4 109,249 - ABIE40_RS20045 0.24 +0.6 109,352 + ABIE40_RS20045 0.35 +0.6 109,415 - ABIE40_RS20045 0.42 +1.6 109,451 + ABIE40_RS20045 0.46 -0.1 109,451 + ABIE40_RS20045 0.46 +0.5 109,452 - ABIE40_RS20045 0.46 -0.5 109,589 + ABIE40_RS20045 0.61 +0.5 109,643 + ABIE40_RS20045 0.67 +0.7 109,643 + ABIE40_RS20045 0.67 +0.3 109,643 + ABIE40_RS20045 0.67 +1.4 109,644 - ABIE40_RS20045 0.67 -1.2 109,725 - ABIE40_RS20045 0.76 +0.8 109,725 - ABIE40_RS20045 0.76 +0.1 109,725 - ABIE40_RS20045 0.76 -0.6 109,725 - ABIE40_RS20045 0.76 +0.4 109,729 - ABIE40_RS20045 0.77 -0.3 109,765 - ABIE40_RS20045 0.81 +0.9 109,766 + ABIE40_RS20045 0.81 +1.7 109,766 + ABIE40_RS20045 0.81 -0.1 109,766 + ABIE40_RS20045 0.81 -0.2 109,766 + ABIE40_RS20045 0.81 -0.0 109,766 + ABIE40_RS20045 0.81 +1.2 109,766 + ABIE40_RS20045 0.81 +1.1 109,766 + ABIE40_RS20045 0.81 +2.1 109,766 + ABIE40_RS20045 0.81 +0.1 109,767 - ABIE40_RS20045 0.81 -1.3 109,767 - ABIE40_RS20045 0.81 +0.2 109,852 + +0.5 109,852 + -0.1 109,852 + +1.8 109,853 - +0.5 109,853 - +1.4 109,890 - +0.3 109,890 - +0.9 109,890 - +1.2 109,896 + +1.3 109,896 + +0.5 109,897 - -0.3 109,897 - +0.5 109,898 + -2.3 109,898 + +0.0 109,898 + +0.6 109,898 + -0.9 109,898 + -0.7 109,898 + +0.4 109,898 + -3.1 109,899 - -2.9 109,899 - +0.3 109,899 - +0.3 109,899 - +0.6 109,899 - -0.9 109,964 - +1.4 110,115 + -0.2 110,115 + -0.8 110,115 + -0.0 110,115 + +1.0 110,115 + +0.5 110,115 + +0.2 110,115 + -1.0 110,115 + +0.7 110,116 - +0.6 110,116 - +0.5 110,116 - +0.3 110,272 - ABIE40_RS20050 0.21 +1.1 110,272 - ABIE40_RS20050 0.21 -0.9 110,272 - ABIE40_RS20050 0.21 +0.1 110,272 - ABIE40_RS20050 0.21 +1.1 110,457 + ABIE40_RS20050 0.36 -0.7 110,457 + ABIE40_RS20050 0.36 +1.0 110,457 + ABIE40_RS20050 0.36 -0.0 110,457 + ABIE40_RS20050 0.36 +0.3 110,457 + ABIE40_RS20050 0.36 +0.8 110,457 + ABIE40_RS20050 0.36 +0.2 110,457 + ABIE40_RS20050 0.36 +1.4 110,457 + ABIE40_RS20050 0.36 +1.2 110,458 - ABIE40_RS20050 0.36 +0.3 110,458 - ABIE40_RS20050 0.36 +0.1 110,458 - ABIE40_RS20050 0.36 +1.1 110,458 - ABIE40_RS20050 0.36 +0.5 110,458 - ABIE40_RS20050 0.36 -0.8 110,458 - ABIE40_RS20050 0.36 +2.3 110,532 + ABIE40_RS20050 0.42 -0.9 110,571 + ABIE40_RS20050 0.45 -0.4 110,577 + ABIE40_RS20050 0.45 -0.1 110,613 + ABIE40_RS20050 0.48 +0.3 110,613 + ABIE40_RS20050 0.48 +0.4 110,613 + ABIE40_RS20050 0.48 +1.6 110,613 + ABIE40_RS20050 0.48 +2.8 110,613 + ABIE40_RS20050 0.48 +1.5 110,613 + ABIE40_RS20050 0.48 +1.1 110,614 - ABIE40_RS20050 0.48 -1.0 110,614 - ABIE40_RS20050 0.48 +0.5 110,614 - ABIE40_RS20050 0.48 +0.6 110,630 - ABIE40_RS20050 0.49 -1.0 110,644 + ABIE40_RS20050 0.51 +2.2 110,644 + ABIE40_RS20050 0.51 -0.9 110,644 + ABIE40_RS20050 0.51 -1.2 110,645 - ABIE40_RS20050 0.51 +0.4 110,645 - ABIE40_RS20050 0.51 +0.4 110,645 - ABIE40_RS20050 0.51 +0.6 110,646 + ABIE40_RS20050 0.51 -0.6 110,646 + ABIE40_RS20050 0.51 +0.4 110,647 - ABIE40_RS20050 0.51 -0.8 110,791 + ABIE40_RS20050 0.62 -0.2 110,791 + ABIE40_RS20050 0.62 -1.6 110,791 + ABIE40_RS20050 0.62 +0.1 110,792 - ABIE40_RS20050 0.62 +0.2 110,792 - ABIE40_RS20050 0.62 +1.8 110,792 - ABIE40_RS20050 0.62 +0.1 110,792 - ABIE40_RS20050 0.62 -0.1 110,802 + ABIE40_RS20050 0.63 +1.4 110,802 + ABIE40_RS20050 0.63 +0.6 110,802 + ABIE40_RS20050 0.63 +0.9 110,802 + ABIE40_RS20050 0.63 +0.8 110,802 + ABIE40_RS20050 0.63 +0.6 110,803 - ABIE40_RS20050 0.63 +0.5 110,803 - ABIE40_RS20050 0.63 +0.3 110,803 - ABIE40_RS20050 0.63 -0.3 110,817 + ABIE40_RS20050 0.64 -0.4 110,817 + ABIE40_RS20050 0.64 +1.0 110,817 + ABIE40_RS20050 0.64 -0.8 110,817 + ABIE40_RS20050 0.64 +1.9 110,818 - ABIE40_RS20050 0.64 -0.8 110,818 - ABIE40_RS20050 0.64 -0.4 110,818 - ABIE40_RS20050 0.64 +1.4 110,818 - ABIE40_RS20050 0.64 +0.1 110,859 + ABIE40_RS20050 0.68 +2.1 110,859 + ABIE40_RS20050 0.68 +0.3 110,859 + ABIE40_RS20050 0.68 +0.6 110,859 + ABIE40_RS20050 0.68 +1.6 110,860 - ABIE40_RS20050 0.68 +0.8 110,860 - ABIE40_RS20050 0.68 +1.2 110,860 - ABIE40_RS20050 0.68 +1.1 110,938 - ABIE40_RS20050 0.74 -0.2 110,938 - ABIE40_RS20050 0.74 -0.4 111,003 + ABIE40_RS20050 0.79 +1.3 111,003 + ABIE40_RS20050 0.79 +0.7 111,003 + ABIE40_RS20050 0.79 -0.4 111,004 - ABIE40_RS20050 0.79 +1.0 111,004 - ABIE40_RS20050 0.79 +0.6 111,004 - ABIE40_RS20050 0.79 -0.0 111,089 - ABIE40_RS20050 0.86 +2.1 111,108 + ABIE40_RS20050 0.87 +0.6 111,145 + +0.4 111,145 + +1.8 111,145 + -0.7 111,145 + +0.1 111,146 - +0.3 111,146 - +0.5 111,146 - +0.7 111,268 + +1.3 111,305 + -1.3 111,306 - -0.2 111,356 - -0.9 111,694 + ABIE40_RS20055 0.37 +1.4 111,694 + ABIE40_RS20055 0.37 -0.2 111,694 + ABIE40_RS20055 0.37 -1.2 111,732 - ABIE40_RS20055 0.41 +1.5 111,942 - ABIE40_RS20055 0.64 +0.3 112,191 + +2.1 112,192 - +1.1
Or see this region's nucleotide sequence