Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS17095

Experiment: D-Glucose-6-Phosphate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate (C)
3,411,688	-				+0.8
3,411,693	+				-0.7
3,411,749	+				-0.5
3,411,799	+				-0.3
3,411,799	+				-0.3
3,411,800	-				+0.7
3,411,800	-				-1.1
3,411,800	-				-0.7
3,412,007	+		ABIE40_RS17090	0.21	+0.4
3,412,007	+		ABIE40_RS17090	0.21	-1.0
3,412,007	+		ABIE40_RS17090	0.21	-0.2
3,412,007	+		ABIE40_RS17090	0.21	-0.5
3,412,007	+		ABIE40_RS17090	0.21	+0.5
3,412,007	+		ABIE40_RS17090	0.21	+0.6
3,412,007	+		ABIE40_RS17090	0.21	-1.4
3,412,007	+		ABIE40_RS17090	0.21	-1.7
3,412,007	+		ABIE40_RS17090	0.21	-0.5
3,412,007	+		ABIE40_RS17090	0.21	-1.3
3,412,007	+		ABIE40_RS17090	0.21	+1.4
3,412,007	+		ABIE40_RS17090	0.21	-0.8
3,412,007	+		ABIE40_RS17090	0.21	-0.5
3,412,007	+		ABIE40_RS17090	0.21	-1.6
3,412,008	-		ABIE40_RS17090	0.21	-1.4
3,412,008	-		ABIE40_RS17090	0.21	+0.9
3,412,008	-		ABIE40_RS17090	0.21	-1.0
3,412,008	-		ABIE40_RS17090	0.21	-0.3
3,412,008	-		ABIE40_RS17090	0.21	+0.1
3,412,008	-		ABIE40_RS17090	0.21	-1.3
3,412,008	-		ABIE40_RS17090	0.21	-3.1
3,412,008	-		ABIE40_RS17090	0.21	-1.4
3,412,008	-		ABIE40_RS17090	0.21	-1.5
3,412,008	-		ABIE40_RS17090	0.21	-0.6
3,412,008	-		ABIE40_RS17090	0.21	-0.9
3,412,008	-		ABIE40_RS17090	0.21	-1.5
3,412,008	-		ABIE40_RS17090	0.21	-0.9
3,412,157	+		ABIE40_RS17090	0.41	-0.5
3,412,157	+		ABIE40_RS17090	0.41	+3.0
3,412,157	+		ABIE40_RS17090	0.41	-1.8
3,412,158	-		ABIE40_RS17090	0.41	-0.4
3,412,158	-		ABIE40_RS17090	0.41	-0.8
3,412,158	-		ABIE40_RS17090	0.41	-0.7
3,412,158	-		ABIE40_RS17090	0.41	+0.3
3,412,158	-		ABIE40_RS17090	0.41	-1.7
3,412,159	+		ABIE40_RS17090	0.41	-0.7
3,412,159	+		ABIE40_RS17090	0.41	-1.1
3,412,160	-		ABIE40_RS17090	0.41	-0.4
3,412,160	-		ABIE40_RS17090	0.41	-3.1
3,412,160	-		ABIE40_RS17090	0.41	-0.7
3,412,230	-		ABIE40_RS17090	0.51	-0.9
3,412,601	+				+0.5
3,412,601	+				-0.4
3,412,602	-				-1.3
3,412,642	-				+0.9
3,412,642	-				-0.2
3,412,642	-				+1.0
3,412,683	+				+0.3
3,412,683	+				-0.6
3,412,683	+				-0.3
3,412,684	-				-1.4
3,412,684	-				+1.5
3,412,736	-				-0.2
3,412,809	+		ABIE40_RS17095	0.13	+0.1
3,412,809	+		ABIE40_RS17095	0.13	+0.6
3,412,809	+		ABIE40_RS17095	0.13	-1.7
3,412,860	+		ABIE40_RS17095	0.17	+4.1
3,412,860	+		ABIE40_RS17095	0.17	-1.1
3,412,860	+		ABIE40_RS17095	0.17	+0.9
3,412,860	+		ABIE40_RS17095	0.17	-2.2
3,412,861	-		ABIE40_RS17095	0.18	-3.0
3,412,861	-		ABIE40_RS17095	0.18	+2.4
3,413,007	+		ABIE40_RS17095	0.30	-0.5
3,413,008	-		ABIE40_RS17095	0.30	+0.4
3,413,008	-		ABIE40_RS17095	0.30	-0.8
3,413,008	-		ABIE40_RS17095	0.30	+0.8
3,413,123	+		ABIE40_RS17095	0.40	+0.4
3,413,265	+		ABIE40_RS17095	0.53	-0.7
3,413,371	-		ABIE40_RS17095	0.62	+0.6
3,413,410	-		ABIE40_RS17095	0.65	+0.1
3,413,410	-		ABIE40_RS17095	0.65	+0.9
3,413,434	+		ABIE40_RS17095	0.67	-0.4
3,413,490	+		ABIE40_RS17095	0.72	-0.6
3,413,490	+		ABIE40_RS17095	0.72	-1.9
3,413,490	+		ABIE40_RS17095	0.72	-0.7
3,413,490	+		ABIE40_RS17095	0.72	-0.1
3,413,490	+		ABIE40_RS17095	0.72	+1.4
3,413,490	+		ABIE40_RS17095	0.72	-0.8
3,413,490	+		ABIE40_RS17095	0.72	-0.3
3,413,490	+		ABIE40_RS17095	0.72	+0.5
3,413,490	+		ABIE40_RS17095	0.72	+0.4
3,413,490	+		ABIE40_RS17095	0.72	+0.4
3,413,491	-		ABIE40_RS17095	0.72	+0.4
3,413,491	-		ABIE40_RS17095	0.72	+0.4
3,413,491	-		ABIE40_RS17095	0.72	-0.8
3,413,568	+		ABIE40_RS17095	0.79	-0.1
3,413,569	-		ABIE40_RS17095	0.79	-0.1
3,413,607	+		ABIE40_RS17095	0.83	+4.0
3,413,607	+		ABIE40_RS17095	0.83	-0.1
3,413,607	+		ABIE40_RS17095	0.83	+0.8
3,413,607	+		ABIE40_RS17095	0.83	+0.3
3,413,608	-		ABIE40_RS17095	0.83	-0.4
3,413,608	-		ABIE40_RS17095	0.83	+0.4
3,413,608	-		ABIE40_RS17095	0.83	+0.1
3,413,608	-		ABIE40_RS17095	0.83	-1.0
3,413,634	+		ABIE40_RS17095	0.85	+1.4
3,413,634	+		ABIE40_RS17095	0.85	-0.6
3,413,634	+		ABIE40_RS17095	0.85	+0.7
3,413,634	+		ABIE40_RS17095	0.85	+1.4
3,413,634	+		ABIE40_RS17095	0.85	+0.4
3,413,634	+		ABIE40_RS17095	0.85	+0.6
3,413,635	-		ABIE40_RS17095	0.85	+1.6
3,413,635	-		ABIE40_RS17095	0.85	+1.0
3,413,635	-		ABIE40_RS17095	0.85	-0.5
3,413,661	+		ABIE40_RS17095	0.87	-0.7
3,413,662	-		ABIE40_RS17095	0.87	-1.1
3,413,724	+				+0.1
3,413,724	+				+0.3
3,413,724	+				-0.4
3,413,724	+				-2.3
3,413,724	+				-0.2
3,413,724	+				+0.2
3,413,724	+				+0.8
3,413,725	-				-1.7
3,413,725	-				-0.6
3,413,725	-				+0.5
3,413,725	-				-1.6
3,413,725	-				-0.3
3,413,725	-				-0.2
3,413,725	-				+0.3
3,413,840	+				+0.4
3,413,877	-				-0.9
3,413,877	-				-1.4
3,413,885	+				+0.1
3,413,950	+		ABIE40_RS17100	0.17	+1.5
3,413,951	-		ABIE40_RS17100	0.17	+0.8
3,413,951	-		ABIE40_RS17100	0.17	+1.6
3,414,032	+		ABIE40_RS17100	0.29	+0.3
3,414,032	+		ABIE40_RS17100	0.29	+0.4
3,414,032	+		ABIE40_RS17100	0.29	+0.3
3,414,032	+		ABIE40_RS17100	0.29	-0.1
3,414,032	+		ABIE40_RS17100	0.29	-0.3
3,414,032	+		ABIE40_RS17100	0.29	+0.7
3,414,033	-		ABIE40_RS17100	0.30	+0.5
3,414,033	-		ABIE40_RS17100	0.30	-0.9
3,414,033	-		ABIE40_RS17100	0.30	+1.2
3,414,033	-		ABIE40_RS17100	0.30	+0.2
3,414,033	-		ABIE40_RS17100	0.30	+0.0
3,414,033	-		ABIE40_RS17100	0.30	-0.2
3,414,033	-		ABIE40_RS17100	0.30	+2.4
3,414,164	+		ABIE40_RS17100	0.49	-0.3
3,414,164	+		ABIE40_RS17100	0.49	+0.3
3,414,164	+		ABIE40_RS17100	0.49	+0.4
3,414,164	+		ABIE40_RS17100	0.49	-1.0
3,414,165	-		ABIE40_RS17100	0.49	+1.0
3,414,165	-		ABIE40_RS17100	0.49	-1.3
3,414,165	-		ABIE40_RS17100	0.49	-1.9
3,414,243	-		ABIE40_RS17100	0.61	+1.2
3,414,642	+				-0.3
3,414,643	-				-1.4
3,414,644	+				+3.3
3,414,644	+				-2.5
3,414,645	-				-0.1
3,414,645	-				-0.1
3,414,681	-				+0.5