Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS15350

Experiment: D-Glucose-6-Phosphate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate (C)
3,028,830	-				+1.5
3,028,830	-				-1.5
3,028,840	+				-0.3
3,028,921	+		ABIE40_RS15345	0.16	-0.9
3,028,921	+		ABIE40_RS15345	0.16	+2.3
3,028,922	-		ABIE40_RS15345	0.16	-2.0
3,028,922	-		ABIE40_RS15345	0.16	-0.8
3,028,935	-		ABIE40_RS15345	0.17	-1.1
3,028,977	+		ABIE40_RS15345	0.22	-1.9
3,028,977	+		ABIE40_RS15345	0.22	-0.9
3,028,977	+		ABIE40_RS15345	0.22	-0.5
3,028,978	-		ABIE40_RS15345	0.22	-1.3
3,028,978	-		ABIE40_RS15345	0.22	-2.1
3,029,110	+		ABIE40_RS15345	0.36	+1.1
3,029,110	+		ABIE40_RS15345	0.36	-1.5
3,029,111	-		ABIE40_RS15345	0.36	-0.4
3,029,134	+		ABIE40_RS15345	0.38	-0.7
3,029,135	-		ABIE40_RS15345	0.39	-0.9
3,029,135	-		ABIE40_RS15345	0.39	-0.3
3,029,447	-		ABIE40_RS15345	0.72	-2.6
3,029,447	-		ABIE40_RS15345	0.72	-0.2
3,029,464	+		ABIE40_RS15345	0.73	+0.0
3,029,465	-		ABIE40_RS15345	0.73	-1.7
3,029,465	-		ABIE40_RS15345	0.73	-0.9
3,029,465	-		ABIE40_RS15345	0.73	+1.8
3,029,465	-		ABIE40_RS15345	0.73	-0.9
3,029,465	-		ABIE40_RS15345	0.73	-2.2
3,029,465	-		ABIE40_RS15345	0.73	-1.7
3,029,551	+		ABIE40_RS15345	0.83	-0.3
3,029,552	-		ABIE40_RS15345	0.83	+0.2
3,029,554	-		ABIE40_RS15345	0.83	-2.0
3,029,608	+		ABIE40_RS15345	0.89	-0.1
3,029,608	+		ABIE40_RS15345	0.89	-1.7
3,029,609	-		ABIE40_RS15345	0.89	-0.0
3,029,610	+		ABIE40_RS15345	0.89	-1.0
3,029,610	+		ABIE40_RS15345	0.89	-1.6
3,029,610	+		ABIE40_RS15345	0.89	-0.6
3,029,610	+		ABIE40_RS15345	0.89	-2.9
3,029,610	+		ABIE40_RS15345	0.89	-1.7
3,029,611	-		ABIE40_RS15345	0.89	-0.5
3,029,611	-		ABIE40_RS15345	0.89	-1.2
3,029,705	-				-0.1
3,029,778	-				-0.7
3,029,778	-				+0.1
3,029,792	+				+0.3
3,029,792	+				-0.0
3,029,793	-				-0.7
3,029,911	+		ABIE40_RS15350	0.14	+1.4
3,029,912	-		ABIE40_RS15350	0.14	+0.6
3,029,912	-		ABIE40_RS15350	0.14	+0.3
3,029,968	-		ABIE40_RS15350	0.23	-1.5
3,029,968	-		ABIE40_RS15350	0.23	+0.8
3,029,968	-		ABIE40_RS15350	0.23	-0.1
3,030,145	+		ABIE40_RS15350	0.53	+2.1
3,030,145	+		ABIE40_RS15350	0.53	-1.6
3,030,145	+		ABIE40_RS15350	0.53	-0.9
3,030,145	+		ABIE40_RS15350	0.53	+0.0
3,030,146	-		ABIE40_RS15350	0.53	+0.1
3,030,146	-		ABIE40_RS15350	0.53	+0.1
3,030,146	-		ABIE40_RS15350	0.53	+2.1
3,030,147	+		ABIE40_RS15350	0.53	+0.7
3,030,147	+		ABIE40_RS15350	0.53	-0.9
3,030,148	-		ABIE40_RS15350	0.54	+1.5
3,030,148	-		ABIE40_RS15350	0.54	+0.2
3,030,148	-		ABIE40_RS15350	0.54	+0.6
3,030,148	-		ABIE40_RS15350	0.54	+3.0
3,030,148	-		ABIE40_RS15350	0.54	-0.2
3,030,265	+		ABIE40_RS15350	0.73	-0.4
3,030,266	-		ABIE40_RS15350	0.73	+0.6
3,030,266	-		ABIE40_RS15350	0.73	+0.9
3,030,266	-		ABIE40_RS15350	0.73	+1.5
3,030,266	-		ABIE40_RS15350	0.73	-0.9
3,030,417	+				-0.2
3,030,417	+				-1.7
3,030,417	+				+1.1
3,030,428	-				-0.4
3,030,446	+				-1.1
3,030,447	-				+0.7
3,030,504	+				-1.7
3,030,549	+				-1.4
3,030,549	+				+0.4
3,030,550	-				-0.9
3,030,550	-				-1.5
3,030,550	-				-0.2
3,030,550	-				-0.5
3,030,581	-				+0.5
3,030,738	+		ABIE40_RS15355	0.13	+0.3
3,030,738	+		ABIE40_RS15355	0.13	+1.2
3,030,738	+		ABIE40_RS15355	0.13	-2.6
3,030,738	+		ABIE40_RS15355	0.13	+0.4
3,030,738	+		ABIE40_RS15355	0.13	-0.2
3,030,739	-		ABIE40_RS15355	0.13	+1.3
3,030,739	-		ABIE40_RS15355	0.13	-0.1
3,030,739	-		ABIE40_RS15355	0.13	+0.3
3,030,739	-		ABIE40_RS15355	0.13	-0.8
3,030,739	-		ABIE40_RS15355	0.13	-1.1
3,030,746	+		ABIE40_RS15355	0.14	+1.1
3,030,747	-		ABIE40_RS15355	0.14	-0.2
3,030,777	+		ABIE40_RS15355	0.17	+1.5
3,030,777	+		ABIE40_RS15355	0.17	+1.1
3,030,778	-		ABIE40_RS15355	0.17	+1.1
3,030,778	-		ABIE40_RS15355	0.17	+0.2
3,030,850	+		ABIE40_RS15355	0.22	+1.1
3,030,850	+		ABIE40_RS15355	0.22	+0.6
3,030,850	+		ABIE40_RS15355	0.22	+1.9
3,030,851	-		ABIE40_RS15355	0.23	-0.5
3,030,870	+		ABIE40_RS15355	0.24	+0.2
3,030,870	+		ABIE40_RS15355	0.24	-0.0
3,030,870	+		ABIE40_RS15355	0.24	-0.1
3,030,871	-		ABIE40_RS15355	0.24	+0.0
3,030,871	-		ABIE40_RS15355	0.24	-0.4
3,030,871	-		ABIE40_RS15355	0.24	+1.8
3,030,871	-		ABIE40_RS15355	0.24	-1.1
3,030,891	+		ABIE40_RS15355	0.26	-0.2
3,030,892	-		ABIE40_RS15355	0.26	+0.2
3,030,892	-		ABIE40_RS15355	0.26	+0.6
3,031,014	+		ABIE40_RS15355	0.36	+1.9
3,031,014	+		ABIE40_RS15355	0.36	+1.0
3,031,152	+		ABIE40_RS15355	0.47	+1.1
3,031,152	+		ABIE40_RS15355	0.47	+0.8
3,031,152	+		ABIE40_RS15355	0.47	+0.5
3,031,153	-		ABIE40_RS15355	0.47	-0.3
3,031,153	-		ABIE40_RS15355	0.47	-1.5
3,031,153	-		ABIE40_RS15355	0.47	-0.4
3,031,157	+		ABIE40_RS15355	0.48	+0.0
3,031,157	+		ABIE40_RS15355	0.48	+0.5
3,031,157	+		ABIE40_RS15355	0.48	-2.0
3,031,158	-		ABIE40_RS15355	0.48	+0.3
3,031,158	-		ABIE40_RS15355	0.48	+0.2
3,031,204	+		ABIE40_RS15355	0.52	-0.5
3,031,205	-		ABIE40_RS15355	0.52	+0.5
3,031,225	-		ABIE40_RS15355	0.53	-1.1
3,031,225	-		ABIE40_RS15355	0.53	-0.6
3,031,225	-		ABIE40_RS15355	0.53	+1.3
3,031,225	-		ABIE40_RS15355	0.53	+0.5
3,031,344	+		ABIE40_RS15355	0.63	+0.3
3,031,344	+		ABIE40_RS15355	0.63	-0.5
3,031,344	+		ABIE40_RS15355	0.63	+2.8
3,031,345	-		ABIE40_RS15355	0.63	+1.4