Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS13130

Experiment: D-Glucose-6-Phosphate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate (C)
2,560,115	+		ABIE40_RS13125	0.30	-2.1
2,560,116	-		ABIE40_RS13125	0.30	-1.3
2,560,130	+		ABIE40_RS13125	0.31	-2.0
2,560,130	+		ABIE40_RS13125	0.31	-3.0
2,560,130	+		ABIE40_RS13125	0.31	-1.8
2,560,131	-		ABIE40_RS13125	0.31	-2.3
2,560,181	+		ABIE40_RS13125	0.35	-1.5
2,560,181	+		ABIE40_RS13125	0.35	+0.0
2,560,181	+		ABIE40_RS13125	0.35	-4.3
2,560,181	+		ABIE40_RS13125	0.35	-3.0
2,560,181	+		ABIE40_RS13125	0.35	-3.0
2,560,181	+		ABIE40_RS13125	0.35	-3.3
2,560,181	+		ABIE40_RS13125	0.35	-1.8
2,560,182	-		ABIE40_RS13125	0.35	-2.9
2,560,182	-		ABIE40_RS13125	0.35	-4.5
2,560,182	-		ABIE40_RS13125	0.35	-1.8
2,560,182	-		ABIE40_RS13125	0.35	-2.6
2,560,182	-		ABIE40_RS13125	0.35	-2.1
2,560,182	-		ABIE40_RS13125	0.35	-2.8
2,560,182	-		ABIE40_RS13125	0.35	-4.1
2,560,182	-		ABIE40_RS13125	0.35	-2.8
2,560,226	+		ABIE40_RS13125	0.39	-3.0
2,560,226	+		ABIE40_RS13125	0.39	-2.0
2,560,226	+		ABIE40_RS13125	0.39	-1.4
2,560,233	-		ABIE40_RS13125	0.39	-3.3
2,560,233	-		ABIE40_RS13125	0.39	-3.6
2,560,280	+		ABIE40_RS13125	0.43	-2.2
2,560,374	+		ABIE40_RS13125	0.51	-2.2
2,560,407	-		ABIE40_RS13125	0.53	-2.1
2,560,407	-		ABIE40_RS13125	0.53	-2.3
2,560,407	-		ABIE40_RS13125	0.53	-2.8
2,560,518	+		ABIE40_RS13125	0.62	-3.0
2,560,562	+		ABIE40_RS13125	0.65	-1.7
2,560,563	-		ABIE40_RS13125	0.66	-1.5
2,560,563	-		ABIE40_RS13125	0.66	+0.9
2,560,563	-		ABIE40_RS13125	0.66	-1.8
2,560,595	+		ABIE40_RS13125	0.68	-1.2
2,560,595	+		ABIE40_RS13125	0.68	-1.0
2,560,596	-		ABIE40_RS13125	0.68	-1.0
2,560,596	-		ABIE40_RS13125	0.68	-2.3
2,560,596	-		ABIE40_RS13125	0.68	-3.8
2,560,596	-		ABIE40_RS13125	0.68	-3.2
2,560,616	+		ABIE40_RS13125	0.70	-2.8
2,560,641	-		ABIE40_RS13125	0.72	-3.8
2,560,641	-		ABIE40_RS13125	0.72	-2.2
2,560,641	-		ABIE40_RS13125	0.72	-3.4
2,560,649	+		ABIE40_RS13125	0.72	-2.5
2,560,649	+		ABIE40_RS13125	0.72	-1.8
2,560,649	+		ABIE40_RS13125	0.72	-2.4
2,560,650	-		ABIE40_RS13125	0.72	-1.9
2,560,650	-		ABIE40_RS13125	0.72	-1.2
2,560,652	+		ABIE40_RS13125	0.73	-4.0
2,560,652	+		ABIE40_RS13125	0.73	-2.8
2,560,652	+		ABIE40_RS13125	0.73	-2.5
2,560,676	+		ABIE40_RS13125	0.74	-1.0
2,560,677	-		ABIE40_RS13125	0.75	-4.7
2,560,718	+		ABIE40_RS13125	0.78	-2.1
2,560,796	+		ABIE40_RS13125	0.84	-0.9
2,560,796	+		ABIE40_RS13125	0.84	-2.9
2,560,868	+		ABIE40_RS13125	0.90	-1.4
2,560,868	+		ABIE40_RS13125	0.90	-3.1
2,560,868	+		ABIE40_RS13125	0.90	-2.7
2,560,868	+		ABIE40_RS13125	0.90	-1.2
2,560,868	+		ABIE40_RS13125	0.90	-3.4
2,560,868	+		ABIE40_RS13125	0.90	-0.3
2,560,869	-		ABIE40_RS13125	0.90	-3.8
2,560,869	-		ABIE40_RS13125	0.90	-3.3
2,560,869	-		ABIE40_RS13125	0.90	-2.3
2,560,869	-		ABIE40_RS13125	0.90	-0.8
2,560,869	-		ABIE40_RS13125	0.90	+1.6
2,560,874	+				+0.6
2,560,874	+				-0.7
2,560,874	+				-2.7
2,560,874	+				-1.0
2,560,874	+				-1.2
2,560,875	-				-1.5
2,560,875	-				-2.5
2,560,875	-				-0.5
2,560,875	-				-0.8
2,560,916	+				-2.8
2,560,916	+				-2.3
2,560,916	+				-3.3
2,560,917	-				-3.4
2,560,917	-				-2.6
2,560,923	+				-4.3
2,560,923	+				-4.5
2,560,923	+				-1.7
2,560,924	-				-2.8
2,560,980	-				-3.1
2,561,000	+				-2.1
2,561,000	+				-2.6
2,561,000	+				+0.2
2,561,000	+				-1.2
2,561,000	+				-1.7
2,561,001	-				-2.5
2,561,001	-				-3.2
2,561,001	-				-4.0
2,561,001	-				-1.2
2,561,031	-				+0.3
2,561,144	+		ABIE40_RS13130	0.23	-3.6
2,561,144	+		ABIE40_RS13130	0.23	-3.0
2,561,144	+		ABIE40_RS13130	0.23	-2.1
2,561,145	-		ABIE40_RS13130	0.23	-3.2
2,561,145	-		ABIE40_RS13130	0.23	-1.7
2,561,145	-		ABIE40_RS13130	0.23	-4.0
2,561,146	+		ABIE40_RS13130	0.23	-5.5
2,561,146	+		ABIE40_RS13130	0.23	-4.5
2,561,147	-		ABIE40_RS13130	0.23	-2.0
2,561,147	-		ABIE40_RS13130	0.23	-1.7
2,561,192	+		ABIE40_RS13130	0.31	-1.2
2,561,193	-		ABIE40_RS13130	0.31	-3.1
2,561,315	+		ABIE40_RS13130	0.52	-2.5
2,561,315	+		ABIE40_RS13130	0.52	-3.3
2,561,316	-		ABIE40_RS13130	0.52	-3.2
2,561,414	+		ABIE40_RS13130	0.69	-2.6
2,561,414	+		ABIE40_RS13130	0.69	+0.0
2,561,414	+		ABIE40_RS13130	0.69	-1.7
2,561,415	-		ABIE40_RS13130	0.69	-3.7
2,561,516	+		ABIE40_RS13130	0.87	-3.7
2,561,516	+		ABIE40_RS13130	0.87	-3.1
2,561,517	-		ABIE40_RS13130	0.87	-3.3
2,561,517	-		ABIE40_RS13130	0.87	-2.5
2,561,576	+				-0.1
2,561,577	-				-0.0
2,561,595	+				-0.7
2,561,675	+				-2.4
2,561,702	+				-1.9
2,561,702	+				-4.1
2,561,703	-				+0.9
2,561,703	-				-0.3
2,561,719	+				-5.0
2,561,719	+				-4.0
2,561,719	+				-0.9
2,561,719	+				-0.7
2,561,719	+				-3.3
2,561,719	+				-1.7
2,561,719	+				+1.2
2,561,720	-				-1.2
2,561,720	-				-0.3
2,561,720	-				-2.3
2,561,833	-				+0.1
2,561,925	+				-0.8
2,561,926	-				-0.6
2,562,376	+		ABIE40_RS13135	0.29	+0.6
2,562,376	+		ABIE40_RS13135	0.29	+0.6
2,562,377	-		ABIE40_RS13135	0.29	+0.2
2,562,377	-		ABIE40_RS13135	0.29	-1.1
2,562,434	-		ABIE40_RS13135	0.32	-1.9
2,562,434	-		ABIE40_RS13135	0.32	+1.4
2,562,434	-		ABIE40_RS13135	0.32	-0.1
2,562,474	+		ABIE40_RS13135	0.34	-0.7
2,562,474	+		ABIE40_RS13135	0.34	-0.5
2,562,474	+		ABIE40_RS13135	0.34	-2.6
2,562,474	+		ABIE40_RS13135	0.34	-0.4
2,562,475	-		ABIE40_RS13135	0.34	-0.1
2,562,475	-		ABIE40_RS13135	0.34	+0.9
2,562,475	-		ABIE40_RS13135	0.34	-2.5
2,562,475	-		ABIE40_RS13135	0.34	-1.5