Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS09690 and ABIE40_RS09695 are separated by 182 nucleotides ABIE40_RS09695 and ABIE40_RS09700 are separated by 66 nucleotides
ABIE40_RS09690: ABIE40_RS09690 - hypothetical protein, at 1,871,175 to 1,872,275
_RS09690
ABIE40_RS09695: ABIE40_RS09695 - hypothetical protein, at 1,872,458 to 1,872,670
_RS09695
ABIE40_RS09700: ABIE40_RS09700 - threonine--tRNA ligase, at 1,872,737 to 1,874,743
_RS09700
Position (kb)
1872
1873 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1871.778 kb on + strand, within ABIE40_RS09690 at 1871.778 kb on + strand, within ABIE40_RS09690 at 1871.779 kb on - strand, within ABIE40_RS09690 at 1871.779 kb on - strand, within ABIE40_RS09690 at 1871.779 kb on - strand, within ABIE40_RS09690 at 1871.779 kb on - strand, within ABIE40_RS09690 at 1871.779 kb on - strand, within ABIE40_RS09690 at 1871.779 kb on - strand, within ABIE40_RS09690 at 1871.779 kb on - strand, within ABIE40_RS09690 at 1871.779 kb on - strand, within ABIE40_RS09690 at 1871.999 kb on + strand, within ABIE40_RS09690 at 1872.000 kb on - strand, within ABIE40_RS09690 at 1872.000 kb on - strand, within ABIE40_RS09690 at 1872.021 kb on + strand, within ABIE40_RS09690 at 1872.022 kb on - strand, within ABIE40_RS09690 at 1872.038 kb on + strand, within ABIE40_RS09690 at 1872.055 kb on - strand, within ABIE40_RS09690 at 1872.055 kb on - strand, within ABIE40_RS09690 at 1872.055 kb on - strand, within ABIE40_RS09690 at 1872.089 kb on + strand, within ABIE40_RS09690 at 1872.090 kb on - strand, within ABIE40_RS09690 at 1872.365 kb on + strand at 1872.383 kb on + strand at 1872.524 kb on + strand, within ABIE40_RS09695 at 1872.524 kb on + strand, within ABIE40_RS09695 at 1872.525 kb on - strand, within ABIE40_RS09695 at 1872.666 kb on + strand at 1872.667 kb on - strand at 1872.667 kb on - strand at 1872.709 kb on + strand at 1872.709 kb on + strand at 1872.709 kb on + strand at 1872.709 kb on + strand at 1872.709 kb on + strand at 1872.709 kb on + strand at 1872.710 kb on - strand at 1872.710 kb on - strand at 1872.710 kb on - strand at 1872.710 kb on - strand at 1872.710 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 1,871,778 + ABIE40_RS09690 0.55 -1.6 1,871,778 + ABIE40_RS09690 0.55 +1.4 1,871,779 - ABIE40_RS09690 0.55 -0.5 1,871,779 - ABIE40_RS09690 0.55 +0.3 1,871,779 - ABIE40_RS09690 0.55 -0.6 1,871,779 - ABIE40_RS09690 0.55 -0.5 1,871,779 - ABIE40_RS09690 0.55 -1.5 1,871,779 - ABIE40_RS09690 0.55 +0.2 1,871,779 - ABIE40_RS09690 0.55 -0.6 1,871,779 - ABIE40_RS09690 0.55 -2.6 1,871,999 + ABIE40_RS09690 0.75 +0.1 1,872,000 - ABIE40_RS09690 0.75 -1.4 1,872,000 - ABIE40_RS09690 0.75 -1.6 1,872,021 + ABIE40_RS09690 0.77 -0.1 1,872,022 - ABIE40_RS09690 0.77 -0.5 1,872,038 + ABIE40_RS09690 0.78 +0.8 1,872,055 - ABIE40_RS09690 0.80 -0.2 1,872,055 - ABIE40_RS09690 0.80 -2.0 1,872,055 - ABIE40_RS09690 0.80 +1.9 1,872,089 + ABIE40_RS09690 0.83 +1.5 1,872,090 - ABIE40_RS09690 0.83 -0.4 1,872,365 + +0.4 1,872,383 + +0.4 1,872,524 + ABIE40_RS09695 0.31 -2.0 1,872,524 + ABIE40_RS09695 0.31 +2.6 1,872,525 - ABIE40_RS09695 0.31 -0.4 1,872,666 + +0.6 1,872,667 - -1.5 1,872,667 - -0.1 1,872,709 + -0.2 1,872,709 + +0.3 1,872,709 + +1.2 1,872,709 + +1.4 1,872,709 + +1.4 1,872,709 + +0.5 1,872,710 - -0.2 1,872,710 - +1.4 1,872,710 - -0.8 1,872,710 - -1.3 1,872,710 - +0.7
Or see this region's nucleotide sequence