Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS09035 and ABIE40_RS09040 are separated by 76 nucleotides ABIE40_RS09040 and ABIE40_RS09045 are separated by 13 nucleotides ABIE40_RS09045 and ABIE40_RS09050 are separated by 91 nucleotides
ABIE40_RS09035: ABIE40_RS09035 - dihydrolipoyl dehydrogenase, at 1,741,359 to 1,742,807
_RS09035
ABIE40_RS09040: ABIE40_RS09040 - GlsB/YeaQ/YmgE family stress response membrane protein, at 1,742,884 to 1,743,138
_RS09040
ABIE40_RS09045: ABIE40_RS09045 - GlsB/YeaQ/YmgE family stress response membrane protein, at 1,743,152 to 1,743,400
_RS09045
ABIE40_RS09050: ABIE40_RS09050 - lipoyl synthase, at 1,743,492 to 1,744,463
_RS09050
Position (kb)
1743
1744 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1742.808 kb on + strand at 1742.808 kb on + strand at 1742.809 kb on - strand at 1742.830 kb on + strand at 1742.831 kb on - strand at 1742.831 kb on - strand at 1742.831 kb on - strand at 1742.831 kb on - strand at 1743.136 kb on + strand at 1743.136 kb on + strand at 1743.137 kb on - strand at 1743.163 kb on - strand at 1743.163 kb on - strand at 1743.163 kb on - strand at 1743.163 kb on - strand at 1743.163 kb on - strand at 1743.250 kb on + strand, within ABIE40_RS09045 at 1743.335 kb on + strand, within ABIE40_RS09045 at 1743.335 kb on + strand, within ABIE40_RS09045 at 1743.372 kb on + strand, within ABIE40_RS09045 at 1743.372 kb on + strand, within ABIE40_RS09045 at 1743.373 kb on - strand, within ABIE40_RS09045 at 1743.373 kb on - strand, within ABIE40_RS09045 at 1743.441 kb on + strand at 1743.441 kb on + strand at 1743.441 kb on + strand at 1743.441 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 1,742,808 + -0.7 1,742,808 + +0.3 1,742,809 - +1.3 1,742,830 + -0.4 1,742,831 - -3.3 1,742,831 - +2.3 1,742,831 - -0.3 1,742,831 - +1.2 1,743,136 + -0.0 1,743,136 + +1.3 1,743,137 - +0.2 1,743,163 - -0.1 1,743,163 - -1.6 1,743,163 - +1.9 1,743,163 - +0.6 1,743,163 - +0.2 1,743,250 + ABIE40_RS09045 0.39 +1.3 1,743,335 + ABIE40_RS09045 0.73 +1.0 1,743,335 + ABIE40_RS09045 0.73 -2.6 1,743,372 + ABIE40_RS09045 0.88 +0.5 1,743,372 + ABIE40_RS09045 0.88 +0.3 1,743,373 - ABIE40_RS09045 0.89 +0.7 1,743,373 - ABIE40_RS09045 0.89 +0.6 1,743,441 + +0.9 1,743,441 + -0.2 1,743,441 + +0.3 1,743,441 + -1.7
Or see this region's nucleotide sequence