Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS06215

Experiment: D-Glucose-6-Phosphate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose-6-Phosphate (C)
1,216,785	+				+1.2
1,216,786	-				-1.6
1,216,786	-				-0.5
1,216,877	+				-0.3
1,216,877	+				-0.8
1,216,939	+				-0.9
1,216,940	-				-1.0
1,216,940	-				-3.0
1,216,940	-				+0.1
1,216,940	-				+0.0
1,216,940	-				-1.0
1,216,940	-				+1.0
1,216,946	+				-0.1
1,216,986	+				-0.4
1,217,040	+				-1.1
1,217,041	-				-0.8
1,217,041	-				-0.5
1,217,073	+		ABIE40_RS06210	0.12	-0.8
1,217,073	+		ABIE40_RS06210	0.12	-0.3
1,217,073	+		ABIE40_RS06210	0.12	-0.5
1,217,073	+		ABIE40_RS06210	0.12	-0.5
1,217,073	+		ABIE40_RS06210	0.12	+0.4
1,217,073	+		ABIE40_RS06210	0.12	-0.9
1,217,073	+		ABIE40_RS06210	0.12	+0.9
1,217,073	+		ABIE40_RS06210	0.12	-1.5
1,217,074	-		ABIE40_RS06210	0.12	-0.5
1,217,074	-		ABIE40_RS06210	0.12	+0.7
1,217,074	-		ABIE40_RS06210	0.12	-0.3
1,217,074	-		ABIE40_RS06210	0.12	-0.2
1,217,074	-		ABIE40_RS06210	0.12	-0.4
1,217,115	+		ABIE40_RS06210	0.18	-0.3
1,217,133	+		ABIE40_RS06210	0.21	-2.5
1,217,133	+		ABIE40_RS06210	0.21	+0.9
1,217,133	+		ABIE40_RS06210	0.21	-0.6
1,217,134	-		ABIE40_RS06210	0.21	+0.7
1,217,134	-		ABIE40_RS06210	0.21	-0.8
1,217,134	-		ABIE40_RS06210	0.21	-2.9
1,217,134	-		ABIE40_RS06210	0.21	-0.7
1,217,134	-		ABIE40_RS06210	0.21	-0.4
1,217,279	-		ABIE40_RS06210	0.45	-1.0
1,217,432	+		ABIE40_RS06210	0.69	+0.6
1,217,432	+		ABIE40_RS06210	0.69	+0.7
1,217,432	+		ABIE40_RS06210	0.69	+0.4
1,217,622	+				-0.1
1,217,622	+				+0.7
1,217,622	+				+0.4
1,217,622	+				-0.6
1,217,623	-				-0.8
1,217,623	-				+0.4
1,217,623	-				+2.0
1,217,646	-				-0.4
1,217,709	+				+0.3
1,217,709	+				-0.0
1,217,782	+				-0.5
1,217,782	+				+1.3
1,217,782	+				+0.2
1,217,782	+				-0.0
1,217,782	+				-0.1
1,217,782	+				-1.4
1,217,782	+				+0.7
1,217,782	+				-1.3
1,217,783	-				-0.6
1,217,783	-				+0.2
1,217,783	-				-0.1
1,217,783	-				+0.2
1,217,783	-				+1.1
1,217,783	-				+1.3
1,217,783	-				-0.6
1,217,783	-				-2.5
1,217,783	-				-0.3
1,217,783	-				+0.0
1,217,784	+				-0.4
1,217,784	+				+0.5
1,217,785	-				+0.4
1,217,890	+		ABIE40_RS06215	0.16	-0.6
1,217,890	+		ABIE40_RS06215	0.16	+0.5
1,217,890	+		ABIE40_RS06215	0.16	-2.6
1,217,892	+		ABIE40_RS06215	0.16	+0.1
1,217,892	+		ABIE40_RS06215	0.16	-0.3
1,217,892	+		ABIE40_RS06215	0.16	+0.2
1,217,893	-		ABIE40_RS06215	0.16	+0.8
1,217,893	-		ABIE40_RS06215	0.16	-0.6
1,217,893	-		ABIE40_RS06215	0.16	+1.1
1,217,893	-		ABIE40_RS06215	0.16	+0.3
1,217,893	-		ABIE40_RS06215	0.16	-0.6
1,217,893	-		ABIE40_RS06215	0.16	+2.8
1,217,893	-		ABIE40_RS06215	0.16	-1.1
1,217,943	+		ABIE40_RS06215	0.21	-2.2
1,217,943	+		ABIE40_RS06215	0.21	-1.4
1,217,943	+		ABIE40_RS06215	0.21	+0.8
1,217,944	-		ABIE40_RS06215	0.22	+0.3
1,217,944	-		ABIE40_RS06215	0.22	-0.2
1,217,944	-		ABIE40_RS06215	0.22	-0.6
1,217,944	-		ABIE40_RS06215	0.22	+1.2
1,218,048	+		ABIE40_RS06215	0.33	-0.1
1,218,057	+		ABIE40_RS06215	0.34	-2.3
1,218,057	+		ABIE40_RS06215	0.34	+0.9
1,218,058	-		ABIE40_RS06215	0.34	-0.6
1,218,058	-		ABIE40_RS06215	0.34	-0.5
1,218,058	-		ABIE40_RS06215	0.34	-1.5
1,218,144	+		ABIE40_RS06215	0.43	-0.6
1,218,144	+		ABIE40_RS06215	0.43	+1.2
1,218,144	+		ABIE40_RS06215	0.43	-0.4
1,218,145	-		ABIE40_RS06215	0.43	-3.4
1,218,145	-		ABIE40_RS06215	0.43	+1.3
1,218,145	-		ABIE40_RS06215	0.43	-1.2
1,218,278	+		ABIE40_RS06215	0.58	+1.8
1,218,279	-		ABIE40_RS06215	0.58	-1.1
1,218,318	+		ABIE40_RS06215	0.62	-0.8
1,218,319	-		ABIE40_RS06215	0.63	+0.0
1,218,366	+		ABIE40_RS06215	0.68	+0.7
1,218,366	+		ABIE40_RS06215	0.68	-0.3
1,218,366	+		ABIE40_RS06215	0.68	+0.3
1,218,366	+		ABIE40_RS06215	0.68	-1.2
1,218,366	+		ABIE40_RS06215	0.68	+0.3
1,218,366	+		ABIE40_RS06215	0.68	-0.5
1,218,366	+		ABIE40_RS06215	0.68	-0.6
1,218,366	+		ABIE40_RS06215	0.68	+0.3
1,218,366	+		ABIE40_RS06215	0.68	-1.2
1,218,367	-		ABIE40_RS06215	0.68	-0.9
1,218,367	-		ABIE40_RS06215	0.68	-0.6
1,218,367	-		ABIE40_RS06215	0.68	-2.4
1,218,367	-		ABIE40_RS06215	0.68	-0.0
1,218,367	-		ABIE40_RS06215	0.68	+1.7
1,218,367	-		ABIE40_RS06215	0.68	-1.4
1,218,367	-		ABIE40_RS06215	0.68	-1.9
1,218,367	-		ABIE40_RS06215	0.68	-0.6
1,218,367	-		ABIE40_RS06215	0.68	-0.7
1,218,367	-		ABIE40_RS06215	0.68	+0.3
1,218,367	-		ABIE40_RS06215	0.68	-0.9
1,218,367	-		ABIE40_RS06215	0.68	+0.4
1,218,367	-		ABIE40_RS06215	0.68	+0.3
1,218,367	-		ABIE40_RS06215	0.68	+1.3
1,218,367	-		ABIE40_RS06215	0.68	+1.1
1,218,367	-		ABIE40_RS06215	0.68	+0.2
1,218,367	-		ABIE40_RS06215	0.68	-0.3
1,218,367	-		ABIE40_RS06215	0.68	-0.2
1,218,367	-		ABIE40_RS06215	0.68	-0.4
1,218,538	+		ABIE40_RS06215	0.86	-0.6
1,218,538	+		ABIE40_RS06215	0.86	-0.1
1,218,538	+		ABIE40_RS06215	0.86	+1.1
1,218,538	+		ABIE40_RS06215	0.86	-1.8
1,218,539	-		ABIE40_RS06215	0.87	+1.4
1,218,539	-		ABIE40_RS06215	0.87	-0.7
1,218,539	-		ABIE40_RS06215	0.87	+2.9
1,218,558	+		ABIE40_RS06215	0.89	-1.4
1,218,558	+		ABIE40_RS06215	0.89	-1.1
1,218,559	-		ABIE40_RS06215	0.89	-0.5
1,218,559	-		ABIE40_RS06215	0.89	+0.5
1,218,559	-		ABIE40_RS06215	0.89	+0.0
1,218,585	+				-0.4
1,218,585	+				+0.4
1,218,586	-				+0.4
1,218,619	+				+0.7
1,218,620	-				-1.6
1,218,686	+				+0.5
1,218,700	+				-1.9
1,218,700	+				+0.4
1,218,701	-				-0.3
1,218,701	-				+0.0
1,218,701	-				-0.2
1,218,701	-				+0.2
1,218,705	+				+0.3
1,218,705	+				-0.4
1,218,705	+				+0.8
1,218,706	-				+0.2
1,218,706	-				-1.9
1,218,712	+				-0.0
1,218,712	+				-0.2
1,218,712	+				+0.2
1,218,713	-				+1.3
1,218,713	-				-0.0
1,218,718	+				-0.3
1,218,719	-				-0.2
1,218,719	-				-0.5
1,218,719	-				+0.0
1,218,837	+				+0.4
1,218,837	+				-3.8
1,218,838	-				-2.7
1,218,838	-				-4.0
1,218,838	-				-2.2
1,218,838	-				+0.7
1,218,838	-				-1.6
1,218,842	-				-2.4
1,218,842	-				-2.6
1,218,976	+		ABIE40_RS06220	0.12	-1.4
1,218,976	+		ABIE40_RS06220	0.12	-2.4
1,218,976	+		ABIE40_RS06220	0.12	-2.7
1,218,976	+		ABIE40_RS06220	0.12	-2.4
1,218,977	-		ABIE40_RS06220	0.12	-0.9
1,218,977	-		ABIE40_RS06220	0.12	-0.9
1,219,023	+		ABIE40_RS06220	0.15	-2.4
1,219,023	+		ABIE40_RS06220	0.15	+0.4
1,219,024	-		ABIE40_RS06220	0.15	-3.1
1,219,109	+		ABIE40_RS06220	0.20	-2.3
1,219,109	+		ABIE40_RS06220	0.20	-1.2
1,219,109	+		ABIE40_RS06220	0.20	-2.4
1,219,110	-		ABIE40_RS06220	0.20	-1.8
1,219,110	-		ABIE40_RS06220	0.20	-2.9
1,219,110	-		ABIE40_RS06220	0.20	-2.8
1,219,110	-		ABIE40_RS06220	0.20	-3.0
1,219,269	+		ABIE40_RS06220	0.30	-1.2
1,219,269	+		ABIE40_RS06220	0.30	-1.9
1,219,269	+		ABIE40_RS06220	0.30	-0.9
1,219,270	-		ABIE40_RS06220	0.30	-3.6
1,219,270	-		ABIE40_RS06220	0.30	-2.6
1,219,270	-		ABIE40_RS06220	0.30	-0.6
1,219,449	+		ABIE40_RS06220	0.41	-0.6
1,219,449	+		ABIE40_RS06220	0.41	-2.9
1,219,449	+		ABIE40_RS06220	0.41	-2.0
1,219,449	+		ABIE40_RS06220	0.41	-3.3
1,219,449	+		ABIE40_RS06220	0.41	-2.1
1,219,449	+		ABIE40_RS06220	0.41	-1.6
1,219,449	+		ABIE40_RS06220	0.41	-2.3
1,219,449	+		ABIE40_RS06220	0.41	-1.6
1,219,450	-		ABIE40_RS06220	0.41	-2.4
1,219,450	-		ABIE40_RS06220	0.41	-4.2
1,219,450	-		ABIE40_RS06220	0.41	-3.4
1,219,450	-		ABIE40_RS06220	0.41	-0.2
1,219,450	-		ABIE40_RS06220	0.41	-3.0
1,219,450	-		ABIE40_RS06220	0.41	-2.0
1,219,450	-		ABIE40_RS06220	0.41	-3.2
1,219,450	-		ABIE40_RS06220	0.41	-1.3
1,219,450	-		ABIE40_RS06220	0.41	-2.4
1,219,521	+		ABIE40_RS06220	0.45	-2.4
1,219,521	+		ABIE40_RS06220	0.45	-1.4
1,219,522	-		ABIE40_RS06220	0.45	-2.6
1,219,631	-		ABIE40_RS06220	0.52	-2.9