Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS04055 and ABIE40_RS04060 are separated by 340 nucleotides ABIE40_RS04060 and ABIE40_RS04065 are separated by 20 nucleotides
ABIE40_RS04055: ABIE40_RS04055 - invasion associated locus B family protein, at 804,562 to 805,163
_RS04055
ABIE40_RS04060: ABIE40_RS04060 - cytochrome c oxidase subunit II, at 805,504 to 806,394
_RS04060
ABIE40_RS04065: ABIE40_RS04065 - cytochrome c oxidase subunit I, at 806,415 to 808,112
_RS04065
Position (kb) 805
806
807 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 804.519 kb on + strand at 804.519 kb on + strand at 804.519 kb on + strand at 804.520 kb on - strand at 804.520 kb on - strand at 805.195 kb on - strand at 805.195 kb on - strand at 805.195 kb on - strand at 805.195 kb on - strand at 805.195 kb on - strand at 805.252 kb on - strand at 805.278 kb on + strand at 805.278 kb on + strand at 805.279 kb on - strand at 805.279 kb on - strand at 805.307 kb on - strand at 805.319 kb on + strand at 805.319 kb on + strand at 805.320 kb on - strand at 805.333 kb on + strand at 805.333 kb on + strand at 805.341 kb on - strand at 805.497 kb on + strand at 805.500 kb on + strand at 805.500 kb on + strand at 805.500 kb on + strand at 805.500 kb on + strand at 805.500 kb on + strand at 805.501 kb on - strand at 805.509 kb on + strand at 805.509 kb on + strand at 805.519 kb on + strand at 805.519 kb on + strand at 805.519 kb on + strand at 805.520 kb on - strand at 805.520 kb on - strand at 805.567 kb on + strand at 805.567 kb on + strand at 805.567 kb on + strand at 805.567 kb on + strand at 805.567 kb on + strand at 805.567 kb on + strand at 805.567 kb on + strand at 805.651 kb on + strand, within ABIE40_RS04060 at 805.652 kb on - strand, within ABIE40_RS04060 at 805.652 kb on - strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.653 kb on + strand, within ABIE40_RS04060 at 805.654 kb on - strand, within ABIE40_RS04060 at 805.654 kb on - strand, within ABIE40_RS04060 at 805.654 kb on - strand, within ABIE40_RS04060 at 805.654 kb on - strand, within ABIE40_RS04060 at 805.654 kb on - strand, within ABIE40_RS04060 at 805.654 kb on - strand, within ABIE40_RS04060 at 805.761 kb on + strand, within ABIE40_RS04060 at 805.761 kb on + strand, within ABIE40_RS04060 at 805.915 kb on + strand, within ABIE40_RS04060 at 805.915 kb on + strand, within ABIE40_RS04060 at 805.922 kb on - strand, within ABIE40_RS04060 at 805.922 kb on - strand, within ABIE40_RS04060 at 805.922 kb on - strand, within ABIE40_RS04060 at 805.922 kb on - strand, within ABIE40_RS04060 at 805.922 kb on - strand, within ABIE40_RS04060 at 805.960 kb on + strand, within ABIE40_RS04060 at 805.960 kb on + strand, within ABIE40_RS04060 at 805.960 kb on + strand, within ABIE40_RS04060 at 806.014 kb on + strand, within ABIE40_RS04060 at 806.204 kb on - strand, within ABIE40_RS04060 at 806.281 kb on + strand, within ABIE40_RS04060 at 806.281 kb on + strand, within ABIE40_RS04060 at 806.281 kb on + strand, within ABIE40_RS04060 at 806.281 kb on + strand, within ABIE40_RS04060 at 806.281 kb on + strand, within ABIE40_RS04060 at 806.282 kb on - strand, within ABIE40_RS04060 at 806.326 kb on + strand at 806.326 kb on + strand at 806.327 kb on - strand at 806.327 kb on - strand at 806.393 kb on - strand at 806.393 kb on - strand at 806.398 kb on - strand at 806.559 kb on + strand at 806.559 kb on + strand at 806.559 kb on + strand at 806.909 kb on - strand, within ABIE40_RS04065 at 806.958 kb on + strand, within ABIE40_RS04065 at 806.959 kb on - strand, within ABIE40_RS04065 at 807.154 kb on + strand, within ABIE40_RS04065 at 807.154 kb on + strand, within ABIE40_RS04065 at 807.261 kb on + strand, within ABIE40_RS04065 at 807.261 kb on + strand, within ABIE40_RS04065 at 807.261 kb on + strand, within ABIE40_RS04065 at 807.300 kb on + strand, within ABIE40_RS04065 at 807.300 kb on + strand, within ABIE40_RS04065 at 807.301 kb on - strand, within ABIE40_RS04065 at 807.301 kb on - strand, within ABIE40_RS04065 at 807.375 kb on + strand, within ABIE40_RS04065 at 807.390 kb on + strand, within ABIE40_RS04065 at 807.390 kb on + strand, within ABIE40_RS04065 at 807.390 kb on + strand, within ABIE40_RS04065 at 807.391 kb on - strand, within ABIE40_RS04065
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 804,519 + +0.3 804,519 + -0.1 804,519 + -1.3 804,520 - -1.8 804,520 - -1.3 805,195 - +0.1 805,195 - +1.7 805,195 - -0.3 805,195 - +0.1 805,195 - +0.6 805,252 - +0.1 805,278 + +1.2 805,278 + -1.8 805,279 - -0.5 805,279 - -0.1 805,307 - -0.2 805,319 + +0.7 805,319 + -0.2 805,320 - -0.5 805,333 + +1.7 805,333 + -1.3 805,341 - -0.6 805,497 + -1.2 805,500 + -2.2 805,500 + -3.2 805,500 + -2.6 805,500 + -4.3 805,500 + -2.8 805,501 - -0.5 805,509 + -3.0 805,509 + -2.6 805,519 + -3.3 805,519 + -3.7 805,519 + -2.2 805,520 - -1.4 805,520 - -1.9 805,567 + -1.1 805,567 + -2.8 805,567 + -3.2 805,567 + -2.1 805,567 + +1.7 805,567 + -2.6 805,567 + -3.8 805,651 + ABIE40_RS04060 0.16 -3.0 805,652 - ABIE40_RS04060 0.17 -1.9 805,652 - ABIE40_RS04060 0.17 -1.1 805,653 + ABIE40_RS04060 0.17 +0.1 805,653 + ABIE40_RS04060 0.17 -2.7 805,653 + ABIE40_RS04060 0.17 -4.5 805,653 + ABIE40_RS04060 0.17 -4.4 805,653 + ABIE40_RS04060 0.17 -2.4 805,653 + ABIE40_RS04060 0.17 -0.1 805,653 + ABIE40_RS04060 0.17 -0.1 805,653 + ABIE40_RS04060 0.17 -2.0 805,653 + ABIE40_RS04060 0.17 -0.9 805,653 + ABIE40_RS04060 0.17 -1.5 805,653 + ABIE40_RS04060 0.17 -4.2 805,653 + ABIE40_RS04060 0.17 -3.2 805,653 + ABIE40_RS04060 0.17 -2.8 805,653 + ABIE40_RS04060 0.17 -1.4 805,653 + ABIE40_RS04060 0.17 -3.3 805,653 + ABIE40_RS04060 0.17 -1.9 805,653 + ABIE40_RS04060 0.17 -2.0 805,653 + ABIE40_RS04060 0.17 -3.2 805,653 + ABIE40_RS04060 0.17 -1.1 805,654 - ABIE40_RS04060 0.17 -0.7 805,654 - ABIE40_RS04060 0.17 -2.0 805,654 - ABIE40_RS04060 0.17 +0.1 805,654 - ABIE40_RS04060 0.17 -1.8 805,654 - ABIE40_RS04060 0.17 -1.3 805,654 - ABIE40_RS04060 0.17 -2.4 805,761 + ABIE40_RS04060 0.29 -3.1 805,761 + ABIE40_RS04060 0.29 -1.8 805,915 + ABIE40_RS04060 0.46 -4.7 805,915 + ABIE40_RS04060 0.46 -3.3 805,922 - ABIE40_RS04060 0.47 -1.1 805,922 - ABIE40_RS04060 0.47 -2.9 805,922 - ABIE40_RS04060 0.47 -2.4 805,922 - ABIE40_RS04060 0.47 -2.2 805,922 - ABIE40_RS04060 0.47 +0.1 805,960 + ABIE40_RS04060 0.51 -1.6 805,960 + ABIE40_RS04060 0.51 +0.1 805,960 + ABIE40_RS04060 0.51 -3.7 806,014 + ABIE40_RS04060 0.57 -3.7 806,204 - ABIE40_RS04060 0.79 -0.6 806,281 + ABIE40_RS04060 0.87 -2.0 806,281 + ABIE40_RS04060 0.87 -3.1 806,281 + ABIE40_RS04060 0.87 -0.7 806,281 + ABIE40_RS04060 0.87 -0.5 806,281 + ABIE40_RS04060 0.87 -2.4 806,282 - ABIE40_RS04060 0.87 -2.3 806,326 + -1.1 806,326 + -0.8 806,327 - -2.7 806,327 - -0.9 806,393 - -3.3 806,393 - -3.2 806,398 - -3.0 806,559 + -3.5 806,559 + -2.6 806,559 + -1.5 806,909 - ABIE40_RS04065 0.29 -1.0 806,958 + ABIE40_RS04065 0.32 -2.2 806,959 - ABIE40_RS04065 0.32 -3.4 807,154 + ABIE40_RS04065 0.44 -2.3 807,154 + ABIE40_RS04065 0.44 -0.9 807,261 + ABIE40_RS04065 0.50 -3.5 807,261 + ABIE40_RS04065 0.50 -1.3 807,261 + ABIE40_RS04065 0.50 -2.9 807,300 + ABIE40_RS04065 0.52 -3.5 807,300 + ABIE40_RS04065 0.52 -2.9 807,301 - ABIE40_RS04065 0.52 -0.5 807,301 - ABIE40_RS04065 0.52 -0.3 807,375 + ABIE40_RS04065 0.57 -1.5 807,390 + ABIE40_RS04065 0.57 -2.1 807,390 + ABIE40_RS04065 0.57 -1.3 807,390 + ABIE40_RS04065 0.57 -2.0 807,391 - ABIE40_RS04065 0.57 -0.7
Or see this region's nucleotide sequence