Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS03760 and ABIE40_RS03765 overlap by 20 nucleotides ABIE40_RS03765 and ABIE40_RS03770 are separated by 26 nucleotides ABIE40_RS03770 and ABIE40_RS03775 are separated by 0 nucleotides
ABIE40_RS03760: ABIE40_RS03760 - pseudouridine synthase, at 741,977 to 743,995
_RS03760
ABIE40_RS03765: ABIE40_RS03765 - 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD, at 743,976 to 744,536
_RS03765
ABIE40_RS03770: ABIE40_RS03770 - patatin-like phospholipase family protein, at 744,563 to 745,462
_RS03770
ABIE40_RS03775: ABIE40_RS03775 - monovalent cation:proton antiporter-2 (CPA2) family protein, at 745,463 to 747,277
_RS03775
Position (kb) 743
744
745 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 743.561 kb on - strand, within ABIE40_RS03760 at 743.604 kb on - strand, within ABIE40_RS03760 at 744.019 kb on + strand at 744.020 kb on - strand at 744.020 kb on - strand at 744.023 kb on + strand at 744.024 kb on - strand at 744.024 kb on - strand at 744.349 kb on - strand, within ABIE40_RS03765 at 744.349 kb on - strand, within ABIE40_RS03765 at 744.468 kb on + strand, within ABIE40_RS03765 at 744.468 kb on + strand, within ABIE40_RS03765 at 744.468 kb on + strand, within ABIE40_RS03765 at 744.468 kb on + strand, within ABIE40_RS03765 at 744.468 kb on + strand, within ABIE40_RS03765 at 744.468 kb on + strand, within ABIE40_RS03765 at 744.468 kb on + strand, within ABIE40_RS03765 at 744.468 kb on + strand, within ABIE40_RS03765 at 744.468 kb on + strand, within ABIE40_RS03765 at 744.468 kb on + strand, within ABIE40_RS03765 at 744.468 kb on + strand, within ABIE40_RS03765 at 744.468 kb on + strand, within ABIE40_RS03765 at 744.469 kb on - strand, within ABIE40_RS03765 at 744.469 kb on - strand, within ABIE40_RS03765 at 744.469 kb on - strand, within ABIE40_RS03765 at 744.469 kb on - strand, within ABIE40_RS03765 at 744.469 kb on - strand, within ABIE40_RS03765 at 744.535 kb on - strand at 744.578 kb on - strand at 744.578 kb on - strand at 744.586 kb on + strand at 744.586 kb on + strand at 744.594 kb on + strand at 744.595 kb on - strand at 744.682 kb on + strand, within ABIE40_RS03770 at 744.814 kb on - strand, within ABIE40_RS03770 at 744.814 kb on - strand, within ABIE40_RS03770 at 745.010 kb on + strand, within ABIE40_RS03770 at 745.010 kb on + strand, within ABIE40_RS03770 at 745.010 kb on + strand, within ABIE40_RS03770 at 745.011 kb on - strand, within ABIE40_RS03770 at 745.011 kb on - strand, within ABIE40_RS03770 at 745.154 kb on + strand, within ABIE40_RS03770 at 745.154 kb on + strand, within ABIE40_RS03770 at 745.154 kb on + strand, within ABIE40_RS03770 at 745.154 kb on + strand, within ABIE40_RS03770 at 745.155 kb on - strand, within ABIE40_RS03770 at 745.155 kb on - strand, within ABIE40_RS03770 at 745.155 kb on - strand, within ABIE40_RS03770 at 745.460 kb on + strand at 745.460 kb on + strand at 745.460 kb on + strand at 745.460 kb on + strand at 745.460 kb on + strand at 745.461 kb on - strand at 745.461 kb on - strand at 745.461 kb on - strand at 745.464 kb on + strand at 745.464 kb on + strand at 745.465 kb on - strand at 745.465 kb on - strand at 745.465 kb on - strand at 745.465 kb on - strand at 745.465 kb on - strand at 745.477 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 743,561 - ABIE40_RS03760 0.78 +0.6 743,604 - ABIE40_RS03760 0.81 -1.1 744,019 + +0.3 744,020 - +0.8 744,020 - +0.5 744,023 + +0.2 744,024 - -0.2 744,024 - +0.6 744,349 - ABIE40_RS03765 0.66 +0.7 744,349 - ABIE40_RS03765 0.66 +1.4 744,468 + ABIE40_RS03765 0.88 +0.6 744,468 + ABIE40_RS03765 0.88 -0.4 744,468 + ABIE40_RS03765 0.88 +0.8 744,468 + ABIE40_RS03765 0.88 +0.2 744,468 + ABIE40_RS03765 0.88 +0.7 744,468 + ABIE40_RS03765 0.88 +0.7 744,468 + ABIE40_RS03765 0.88 -0.3 744,468 + ABIE40_RS03765 0.88 +0.4 744,468 + ABIE40_RS03765 0.88 +0.5 744,468 + ABIE40_RS03765 0.88 +1.3 744,468 + ABIE40_RS03765 0.88 -0.3 744,468 + ABIE40_RS03765 0.88 +1.1 744,469 - ABIE40_RS03765 0.88 +4.1 744,469 - ABIE40_RS03765 0.88 +1.7 744,469 - ABIE40_RS03765 0.88 -0.3 744,469 - ABIE40_RS03765 0.88 +0.0 744,469 - ABIE40_RS03765 0.88 -0.5 744,535 - -0.5 744,578 - -0.1 744,578 - -1.1 744,586 + +0.1 744,586 + +0.5 744,594 + +2.7 744,595 - +0.7 744,682 + ABIE40_RS03770 0.13 -1.5 744,814 - ABIE40_RS03770 0.28 +0.9 744,814 - ABIE40_RS03770 0.28 -3.1 745,010 + ABIE40_RS03770 0.50 -0.7 745,010 + ABIE40_RS03770 0.50 +2.5 745,010 + ABIE40_RS03770 0.50 -2.7 745,011 - ABIE40_RS03770 0.50 -1.3 745,011 - ABIE40_RS03770 0.50 -0.4 745,154 + ABIE40_RS03770 0.66 -2.6 745,154 + ABIE40_RS03770 0.66 -0.9 745,154 + ABIE40_RS03770 0.66 +0.5 745,154 + ABIE40_RS03770 0.66 +0.1 745,155 - ABIE40_RS03770 0.66 +0.3 745,155 - ABIE40_RS03770 0.66 +1.0 745,155 - ABIE40_RS03770 0.66 -2.4 745,460 + +0.9 745,460 + +0.5 745,460 + +0.3 745,460 + -1.0 745,460 + -0.1 745,461 - +0.3 745,461 - +0.8 745,461 - +0.8 745,464 + +0.7 745,464 + +1.1 745,465 - +2.0 745,465 - -1.9 745,465 - +0.9 745,465 - +1.1 745,465 - -1.0 745,477 + +0.8
Or see this region's nucleotide sequence