Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS03255 and ABIE40_RS03260 are separated by 159 nucleotides ABIE40_RS03260 and ABIE40_RS03265 are separated by 133 nucleotides
ABIE40_RS03255: ABIE40_RS03255 - isocitrate lyase, at 645,692 to 646,981
_RS03255
ABIE40_RS03260: ABIE40_RS03260 - short-chain fatty acyl-CoA regulator family protein, at 647,141 to 648,550
_RS03260
ABIE40_RS03265: ABIE40_RS03265 - polyamine ABC transporter substrate-binding protein, at 648,684 to 649,781
_RS03265
Position (kb) 647
648
649 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 646.161 kb on + strand, within ABIE40_RS03255 at 646.207 kb on + strand, within ABIE40_RS03255 at 646.217 kb on + strand, within ABIE40_RS03255 at 646.218 kb on + strand, within ABIE40_RS03255 at 646.218 kb on + strand, within ABIE40_RS03255 at 646.219 kb on - strand, within ABIE40_RS03255 at 646.219 kb on - strand, within ABIE40_RS03255 at 646.219 kb on - strand, within ABIE40_RS03255 at 646.219 kb on - strand, within ABIE40_RS03255 at 646.219 kb on - strand, within ABIE40_RS03255 at 646.486 kb on + strand, within ABIE40_RS03255 at 646.488 kb on + strand, within ABIE40_RS03255 at 646.488 kb on + strand, within ABIE40_RS03255 at 646.488 kb on + strand, within ABIE40_RS03255 at 646.488 kb on + strand, within ABIE40_RS03255 at 646.488 kb on + strand, within ABIE40_RS03255 at 646.489 kb on - strand, within ABIE40_RS03255 at 646.489 kb on - strand, within ABIE40_RS03255 at 646.489 kb on - strand, within ABIE40_RS03255 at 646.489 kb on - strand, within ABIE40_RS03255 at 646.669 kb on - strand, within ABIE40_RS03255 at 646.669 kb on - strand, within ABIE40_RS03255 at 646.686 kb on + strand, within ABIE40_RS03255 at 646.686 kb on + strand, within ABIE40_RS03255 at 646.687 kb on - strand, within ABIE40_RS03255 at 646.687 kb on - strand, within ABIE40_RS03255 at 646.737 kb on + strand, within ABIE40_RS03255 at 646.737 kb on + strand, within ABIE40_RS03255 at 646.737 kb on + strand, within ABIE40_RS03255 at 646.737 kb on + strand, within ABIE40_RS03255 at 646.738 kb on - strand, within ABIE40_RS03255 at 646.738 kb on - strand, within ABIE40_RS03255 at 646.738 kb on - strand, within ABIE40_RS03255 at 646.738 kb on - strand, within ABIE40_RS03255 at 646.738 kb on - strand, within ABIE40_RS03255 at 646.738 kb on - strand, within ABIE40_RS03255 at 646.914 kb on + strand at 647.057 kb on + strand at 647.057 kb on + strand at 647.057 kb on + strand at 647.057 kb on + strand at 647.057 kb on + strand at 647.057 kb on + strand at 647.057 kb on + strand at 647.057 kb on + strand at 647.057 kb on + strand at 647.057 kb on + strand at 647.057 kb on + strand at 647.058 kb on - strand at 647.058 kb on - strand at 647.058 kb on - strand at 647.058 kb on - strand at 647.058 kb on - strand at 647.058 kb on - strand at 647.058 kb on - strand at 647.058 kb on - strand at 647.058 kb on - strand at 647.058 kb on - strand at 647.077 kb on + strand at 647.078 kb on - strand at 647.078 kb on - strand at 647.079 kb on + strand at 647.079 kb on + strand at 647.080 kb on - strand at 647.243 kb on + strand at 647.244 kb on - strand at 647.312 kb on + strand, within ABIE40_RS03260 at 647.312 kb on + strand, within ABIE40_RS03260 at 647.312 kb on + strand, within ABIE40_RS03260 at 647.313 kb on - strand, within ABIE40_RS03260 at 647.434 kb on - strand, within ABIE40_RS03260 at 647.477 kb on + strand, within ABIE40_RS03260 at 647.612 kb on + strand, within ABIE40_RS03260 at 647.613 kb on - strand, within ABIE40_RS03260 at 647.613 kb on - strand, within ABIE40_RS03260 at 647.717 kb on - strand, within ABIE40_RS03260 at 647.972 kb on + strand, within ABIE40_RS03260 at 647.972 kb on + strand, within ABIE40_RS03260 at 647.973 kb on - strand, within ABIE40_RS03260 at 647.973 kb on - strand, within ABIE40_RS03260 at 648.008 kb on + strand, within ABIE40_RS03260 at 648.009 kb on - strand, within ABIE40_RS03260 at 648.389 kb on + strand, within ABIE40_RS03260 at 648.389 kb on + strand, within ABIE40_RS03260 at 648.507 kb on + strand at 648.507 kb on + strand at 648.551 kb on + strand at 648.552 kb on - strand at 648.608 kb on + strand at 648.608 kb on + strand at 648.608 kb on + strand at 648.608 kb on + strand at 648.608 kb on + strand at 648.609 kb on - strand at 648.609 kb on - strand at 648.609 kb on - strand at 648.609 kb on - strand at 648.613 kb on + strand at 648.614 kb on - strand at 648.614 kb on - strand at 648.617 kb on + strand at 648.617 kb on + strand at 648.653 kb on + strand at 648.657 kb on + strand at 648.658 kb on - strand at 648.658 kb on - strand at 648.664 kb on + strand at 648.664 kb on + strand at 648.665 kb on - strand at 648.666 kb on + strand at 648.684 kb on - strand at 648.684 kb on - strand at 648.751 kb on - strand at 648.777 kb on + strand at 648.778 kb on - strand at 648.793 kb on - strand at 648.793 kb on - strand at 648.793 kb on - strand at 648.794 kb on + strand, within ABIE40_RS03265 at 648.794 kb on + strand, within ABIE40_RS03265 at 648.910 kb on - strand, within ABIE40_RS03265 at 648.910 kb on - strand, within ABIE40_RS03265 at 648.967 kb on - strand, within ABIE40_RS03265 at 649.059 kb on + strand, within ABIE40_RS03265 at 649.059 kb on + strand, within ABIE40_RS03265 at 649.059 kb on + strand, within ABIE40_RS03265 at 649.059 kb on + strand, within ABIE40_RS03265 at 649.060 kb on - strand, within ABIE40_RS03265 at 649.060 kb on - strand, within ABIE40_RS03265 at 649.060 kb on - strand, within ABIE40_RS03265 at 649.071 kb on + strand, within ABIE40_RS03265 at 649.071 kb on + strand, within ABIE40_RS03265 at 649.071 kb on + strand, within ABIE40_RS03265 at 649.072 kb on - strand, within ABIE40_RS03265 at 649.072 kb on - strand, within ABIE40_RS03265 at 649.072 kb on - strand, within ABIE40_RS03265 at 649.072 kb on - strand, within ABIE40_RS03265 at 649.098 kb on + strand, within ABIE40_RS03265 at 649.098 kb on + strand, within ABIE40_RS03265 at 649.099 kb on - strand, within ABIE40_RS03265 at 649.100 kb on + strand, within ABIE40_RS03265 at 649.100 kb on + strand, within ABIE40_RS03265 at 649.100 kb on + strand, within ABIE40_RS03265 at 649.101 kb on - strand, within ABIE40_RS03265 at 649.101 kb on - strand, within ABIE40_RS03265 at 649.101 kb on - strand, within ABIE40_RS03265 at 649.203 kb on + strand, within ABIE40_RS03265 at 649.203 kb on + strand, within ABIE40_RS03265 at 649.203 kb on + strand, within ABIE40_RS03265 at 649.203 kb on + strand, within ABIE40_RS03265 at 649.203 kb on + strand, within ABIE40_RS03265 at 649.204 kb on - strand, within ABIE40_RS03265 at 649.204 kb on - strand, within ABIE40_RS03265 at 649.204 kb on - strand, within ABIE40_RS03265 at 649.204 kb on - strand, within ABIE40_RS03265 at 649.249 kb on - strand, within ABIE40_RS03265 at 649.354 kb on - strand, within ABIE40_RS03265 at 649.354 kb on - strand, within ABIE40_RS03265 at 649.354 kb on - strand, within ABIE40_RS03265 at 649.355 kb on + strand, within ABIE40_RS03265 at 649.355 kb on + strand, within ABIE40_RS03265 at 649.356 kb on - strand, within ABIE40_RS03265 at 649.356 kb on - strand, within ABIE40_RS03265 at 649.356 kb on - strand, within ABIE40_RS03265 at 649.379 kb on + strand, within ABIE40_RS03265 at 649.464 kb on + strand, within ABIE40_RS03265 at 649.465 kb on - strand, within ABIE40_RS03265
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 646,161 + ABIE40_RS03255 0.36 -1.3 646,207 + ABIE40_RS03255 0.40 -3.4 646,217 + ABIE40_RS03255 0.41 -4.3 646,218 + ABIE40_RS03255 0.41 -4.5 646,218 + ABIE40_RS03255 0.41 -2.8 646,219 - ABIE40_RS03255 0.41 -0.7 646,219 - ABIE40_RS03255 0.41 -1.4 646,219 - ABIE40_RS03255 0.41 -2.5 646,219 - ABIE40_RS03255 0.41 -2.8 646,219 - ABIE40_RS03255 0.41 -3.6 646,486 + ABIE40_RS03255 0.62 -5.3 646,488 + ABIE40_RS03255 0.62 -3.0 646,488 + ABIE40_RS03255 0.62 -2.6 646,488 + ABIE40_RS03255 0.62 -0.1 646,488 + ABIE40_RS03255 0.62 -0.7 646,488 + ABIE40_RS03255 0.62 -4.1 646,489 - ABIE40_RS03255 0.62 -0.3 646,489 - ABIE40_RS03255 0.62 -1.5 646,489 - ABIE40_RS03255 0.62 -2.8 646,489 - ABIE40_RS03255 0.62 -3.0 646,669 - ABIE40_RS03255 0.76 -0.7 646,669 - ABIE40_RS03255 0.76 -2.5 646,686 + ABIE40_RS03255 0.77 +0.1 646,686 + ABIE40_RS03255 0.77 -3.7 646,687 - ABIE40_RS03255 0.77 -3.0 646,687 - ABIE40_RS03255 0.77 -6.3 646,737 + ABIE40_RS03255 0.81 -3.0 646,737 + ABIE40_RS03255 0.81 -4.0 646,737 + ABIE40_RS03255 0.81 -1.8 646,737 + ABIE40_RS03255 0.81 -2.3 646,738 - ABIE40_RS03255 0.81 -3.1 646,738 - ABIE40_RS03255 0.81 -4.8 646,738 - ABIE40_RS03255 0.81 -2.7 646,738 - ABIE40_RS03255 0.81 -4.3 646,738 - ABIE40_RS03255 0.81 -3.9 646,738 - ABIE40_RS03255 0.81 -2.4 646,914 + -3.2 647,057 + -1.7 647,057 + -2.6 647,057 + -3.3 647,057 + -2.0 647,057 + -0.2 647,057 + -3.9 647,057 + -2.7 647,057 + -3.3 647,057 + -2.5 647,057 + -3.1 647,057 + -3.0 647,058 - -0.6 647,058 - -0.2 647,058 - -1.8 647,058 - -1.2 647,058 - -0.3 647,058 - -0.7 647,058 - -2.4 647,058 - -0.9 647,058 - -2.6 647,058 - -2.0 647,077 + -2.6 647,078 - -1.6 647,078 - -2.0 647,079 + -4.3 647,079 + -2.8 647,080 - -2.2 647,243 + -1.5 647,244 - -1.3 647,312 + ABIE40_RS03260 0.12 -0.9 647,312 + ABIE40_RS03260 0.12 -0.3 647,312 + ABIE40_RS03260 0.12 -1.8 647,313 - ABIE40_RS03260 0.12 -3.1 647,434 - ABIE40_RS03260 0.21 -2.2 647,477 + ABIE40_RS03260 0.24 -1.5 647,612 + ABIE40_RS03260 0.33 -1.1 647,613 - ABIE40_RS03260 0.33 -2.0 647,613 - ABIE40_RS03260 0.33 -2.5 647,717 - ABIE40_RS03260 0.41 -1.1 647,972 + ABIE40_RS03260 0.59 -3.5 647,972 + ABIE40_RS03260 0.59 -1.8 647,973 - ABIE40_RS03260 0.59 -2.3 647,973 - ABIE40_RS03260 0.59 -1.9 648,008 + ABIE40_RS03260 0.61 -5.6 648,009 - ABIE40_RS03260 0.62 -0.9 648,389 + ABIE40_RS03260 0.89 -2.4 648,389 + ABIE40_RS03260 0.89 -1.7 648,507 + +2.5 648,507 + +1.5 648,551 + -1.7 648,552 - +0.9 648,608 + -0.3 648,608 + -2.1 648,608 + +1.3 648,608 + -4.0 648,608 + -0.3 648,609 - +0.3 648,609 - +1.9 648,609 - -0.2 648,609 - +0.6 648,613 + -0.1 648,614 - +0.3 648,614 - +0.6 648,617 + -1.8 648,617 + -1.4 648,653 + +0.7 648,657 + -1.5 648,658 - -0.8 648,658 - -2.0 648,664 + -0.5 648,664 + -0.1 648,665 - -1.3 648,666 + +1.1 648,684 - -1.5 648,684 - +1.1 648,751 - -0.3 648,777 + +1.3 648,778 - -0.4 648,793 - -0.8 648,793 - +1.2 648,793 - +0.1 648,794 + ABIE40_RS03265 0.10 +0.2 648,794 + ABIE40_RS03265 0.10 -1.7 648,910 - ABIE40_RS03265 0.21 -0.7 648,910 - ABIE40_RS03265 0.21 +0.8 648,967 - ABIE40_RS03265 0.26 -0.1 649,059 + ABIE40_RS03265 0.34 -0.3 649,059 + ABIE40_RS03265 0.34 -0.2 649,059 + ABIE40_RS03265 0.34 -1.6 649,059 + ABIE40_RS03265 0.34 -0.2 649,060 - ABIE40_RS03265 0.34 -0.8 649,060 - ABIE40_RS03265 0.34 +0.7 649,060 - ABIE40_RS03265 0.34 +1.7 649,071 + ABIE40_RS03265 0.35 -1.7 649,071 + ABIE40_RS03265 0.35 +0.9 649,071 + ABIE40_RS03265 0.35 +1.0 649,072 - ABIE40_RS03265 0.35 -1.6 649,072 - ABIE40_RS03265 0.35 +0.1 649,072 - ABIE40_RS03265 0.35 -0.5 649,072 - ABIE40_RS03265 0.35 -0.5 649,098 + ABIE40_RS03265 0.38 +1.3 649,098 + ABIE40_RS03265 0.38 -0.1 649,099 - ABIE40_RS03265 0.38 +0.1 649,100 + ABIE40_RS03265 0.38 -0.4 649,100 + ABIE40_RS03265 0.38 -0.9 649,100 + ABIE40_RS03265 0.38 +1.4 649,101 - ABIE40_RS03265 0.38 +0.4 649,101 - ABIE40_RS03265 0.38 +0.5 649,101 - ABIE40_RS03265 0.38 +0.2 649,203 + ABIE40_RS03265 0.47 -1.0 649,203 + ABIE40_RS03265 0.47 -0.3 649,203 + ABIE40_RS03265 0.47 +0.7 649,203 + ABIE40_RS03265 0.47 +1.2 649,203 + ABIE40_RS03265 0.47 -0.6 649,204 - ABIE40_RS03265 0.47 -0.0 649,204 - ABIE40_RS03265 0.47 -0.6 649,204 - ABIE40_RS03265 0.47 -1.8 649,204 - ABIE40_RS03265 0.47 +0.0 649,249 - ABIE40_RS03265 0.51 -1.0 649,354 - ABIE40_RS03265 0.61 -0.1 649,354 - ABIE40_RS03265 0.61 -1.6 649,354 - ABIE40_RS03265 0.61 +0.0 649,355 + ABIE40_RS03265 0.61 -1.3 649,355 + ABIE40_RS03265 0.61 -0.9 649,356 - ABIE40_RS03265 0.61 -0.1 649,356 - ABIE40_RS03265 0.61 +0.8 649,356 - ABIE40_RS03265 0.61 +0.2 649,379 + ABIE40_RS03265 0.63 +0.2 649,464 + ABIE40_RS03265 0.71 -0.0 649,465 - ABIE40_RS03265 0.71 -0.1
Or see this region's nucleotide sequence