Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS03210 and ABIE40_RS03215 are separated by 174 nucleotides ABIE40_RS03215 and ABIE40_RS03220 are separated by 151 nucleotides ABIE40_RS03220 and ABIE40_RS03225 are separated by 286 nucleotides
ABIE40_RS03210: ABIE40_RS03210 - glutamine synthetase family protein, at 635,131 to 636,567
_RS03210
ABIE40_RS03215: ABIE40_RS03215 - NAD(P)/FAD-dependent oxidoreductase, at 636,742 to 637,875
_RS03215
ABIE40_RS03220: ABIE40_RS03220 - hypothetical protein, at 638,027 to 638,170
_RS03220
ABIE40_RS03225: ABIE40_RS03225 - methyl-accepting chemotaxis protein, at 638,457 to 640,985
_RS03225
Position (kb) 636
637
638 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 635.756 kb on + strand, within ABIE40_RS03210 at 635.757 kb on - strand, within ABIE40_RS03210 at 635.757 kb on - strand, within ABIE40_RS03210 at 635.757 kb on - strand, within ABIE40_RS03210 at 635.806 kb on + strand, within ABIE40_RS03210 at 635.806 kb on + strand, within ABIE40_RS03210 at 635.806 kb on + strand, within ABIE40_RS03210 at 635.806 kb on + strand, within ABIE40_RS03210 at 635.806 kb on + strand, within ABIE40_RS03210 at 635.806 kb on + strand, within ABIE40_RS03210 at 635.806 kb on + strand, within ABIE40_RS03210 at 635.806 kb on + strand, within ABIE40_RS03210 at 635.807 kb on - strand, within ABIE40_RS03210 at 635.807 kb on - strand, within ABIE40_RS03210 at 635.807 kb on - strand, within ABIE40_RS03210 at 635.807 kb on - strand, within ABIE40_RS03210 at 635.807 kb on - strand, within ABIE40_RS03210 at 635.807 kb on - strand, within ABIE40_RS03210 at 635.807 kb on - strand, within ABIE40_RS03210 at 635.807 kb on - strand, within ABIE40_RS03210 at 635.921 kb on + strand, within ABIE40_RS03210 at 635.921 kb on + strand, within ABIE40_RS03210 at 635.921 kb on + strand, within ABIE40_RS03210 at 635.921 kb on + strand, within ABIE40_RS03210 at 635.922 kb on - strand, within ABIE40_RS03210 at 635.922 kb on - strand, within ABIE40_RS03210 at 635.922 kb on - strand, within ABIE40_RS03210 at 635.922 kb on - strand, within ABIE40_RS03210 at 635.922 kb on - strand, within ABIE40_RS03210 at 635.922 kb on - strand, within ABIE40_RS03210 at 635.922 kb on - strand, within ABIE40_RS03210 at 635.922 kb on - strand, within ABIE40_RS03210 at 635.922 kb on - strand, within ABIE40_RS03210 at 635.970 kb on - strand, within ABIE40_RS03210 at 635.970 kb on - strand, within ABIE40_RS03210 at 636.026 kb on + strand, within ABIE40_RS03210 at 636.056 kb on + strand, within ABIE40_RS03210 at 636.056 kb on + strand, within ABIE40_RS03210 at 636.056 kb on + strand, within ABIE40_RS03210 at 636.056 kb on + strand, within ABIE40_RS03210 at 636.056 kb on + strand, within ABIE40_RS03210 at 636.056 kb on + strand, within ABIE40_RS03210 at 636.057 kb on - strand, within ABIE40_RS03210 at 636.057 kb on - strand, within ABIE40_RS03210 at 636.057 kb on - strand, within ABIE40_RS03210 at 636.065 kb on - strand, within ABIE40_RS03210 at 636.065 kb on - strand, within ABIE40_RS03210 at 636.143 kb on + strand, within ABIE40_RS03210 at 636.144 kb on - strand, within ABIE40_RS03210 at 636.144 kb on - strand, within ABIE40_RS03210 at 636.144 kb on - strand, within ABIE40_RS03210 at 636.144 kb on - strand, within ABIE40_RS03210 at 636.272 kb on + strand, within ABIE40_RS03210 at 636.323 kb on + strand, within ABIE40_RS03210 at 636.324 kb on - strand, within ABIE40_RS03210 at 636.448 kb on + strand at 636.543 kb on + strand at 636.543 kb on + strand at 636.543 kb on + strand at 636.543 kb on + strand at 636.543 kb on + strand at 636.544 kb on - strand at 636.544 kb on - strand at 636.544 kb on - strand at 636.579 kb on + strand at 636.579 kb on + strand at 636.580 kb on - strand at 636.601 kb on + strand at 636.631 kb on + strand at 636.631 kb on + strand at 636.658 kb on - strand at 636.658 kb on - strand at 636.741 kb on + strand at 636.858 kb on + strand, within ABIE40_RS03215 at 636.859 kb on - strand, within ABIE40_RS03215 at 637.144 kb on + strand, within ABIE40_RS03215 at 637.144 kb on + strand, within ABIE40_RS03215 at 637.144 kb on + strand, within ABIE40_RS03215 at 637.144 kb on + strand, within ABIE40_RS03215 at 637.145 kb on - strand, within ABIE40_RS03215 at 637.145 kb on - strand, within ABIE40_RS03215 at 637.777 kb on + strand at 637.823 kb on - strand at 637.823 kb on - strand at 637.824 kb on + strand at 637.824 kb on + strand at 637.824 kb on + strand at 637.871 kb on + strand at 637.871 kb on + strand at 637.872 kb on - strand at 637.872 kb on - strand at 637.872 kb on - strand at 637.872 kb on - strand at 637.872 kb on - strand at 637.873 kb on + strand at 637.873 kb on + strand at 637.874 kb on - strand at 637.874 kb on - strand at 637.874 kb on - strand at 637.874 kb on - strand at 637.893 kb on + strand at 637.894 kb on - strand at 637.909 kb on + strand at 637.909 kb on + strand at 637.910 kb on - strand at 637.963 kb on + strand at 637.964 kb on - strand at 637.998 kb on + strand at 637.998 kb on + strand at 637.998 kb on + strand at 637.999 kb on - strand at 637.999 kb on - strand at 638.003 kb on + strand at 638.003 kb on + strand at 638.003 kb on + strand at 638.003 kb on + strand at 638.003 kb on + strand at 638.004 kb on - strand at 638.004 kb on - strand at 638.004 kb on - strand at 638.004 kb on - strand at 638.024 kb on + strand at 638.024 kb on + strand at 638.025 kb on - strand at 638.032 kb on + strand at 638.032 kb on + strand at 638.032 kb on + strand at 638.032 kb on + strand at 638.033 kb on - strand at 638.033 kb on - strand at 638.033 kb on - strand at 638.033 kb on - strand at 638.190 kb on - strand at 638.191 kb on + strand at 638.191 kb on + strand at 638.191 kb on + strand at 638.191 kb on + strand at 638.192 kb on - strand at 638.192 kb on - strand at 638.192 kb on - strand at 638.196 kb on - strand at 638.236 kb on + strand at 638.237 kb on - strand at 638.273 kb on + strand at 638.277 kb on - strand at 638.303 kb on + strand at 638.303 kb on + strand at 638.304 kb on - strand at 638.304 kb on - strand at 638.371 kb on - strand at 638.371 kb on - strand at 638.437 kb on + strand at 638.437 kb on + strand at 638.437 kb on + strand at 638.437 kb on + strand at 638.438 kb on - strand at 638.452 kb on + strand at 638.452 kb on + strand at 638.452 kb on + strand at 638.452 kb on + strand at 638.452 kb on + strand at 638.453 kb on - strand at 638.453 kb on - strand at 638.453 kb on - strand at 638.467 kb on - strand at 638.468 kb on + strand at 638.468 kb on + strand at 638.468 kb on + strand at 638.469 kb on - strand at 638.469 kb on - strand at 638.469 kb on - strand at 638.562 kb on + strand at 638.563 kb on - strand at 638.563 kb on - strand at 638.563 kb on - strand at 638.563 kb on - strand at 638.563 kb on - strand at 638.563 kb on - strand at 638.641 kb on - strand at 638.641 kb on - strand at 638.697 kb on + strand at 638.698 kb on - strand at 638.698 kb on - strand at 638.698 kb on - strand at 638.698 kb on - strand at 638.698 kb on - strand at 638.698 kb on - strand at 638.699 kb on + strand at 638.699 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 635,756 + ABIE40_RS03210 0.43 -1.3 635,757 - ABIE40_RS03210 0.44 -0.1 635,757 - ABIE40_RS03210 0.44 +0.2 635,757 - ABIE40_RS03210 0.44 +0.3 635,806 + ABIE40_RS03210 0.47 +0.1 635,806 + ABIE40_RS03210 0.47 -1.7 635,806 + ABIE40_RS03210 0.47 +1.3 635,806 + ABIE40_RS03210 0.47 -1.3 635,806 + ABIE40_RS03210 0.47 +1.1 635,806 + ABIE40_RS03210 0.47 -0.0 635,806 + ABIE40_RS03210 0.47 -3.8 635,806 + ABIE40_RS03210 0.47 -0.3 635,807 - ABIE40_RS03210 0.47 +0.1 635,807 - ABIE40_RS03210 0.47 +0.4 635,807 - ABIE40_RS03210 0.47 -2.7 635,807 - ABIE40_RS03210 0.47 +0.3 635,807 - ABIE40_RS03210 0.47 -0.5 635,807 - ABIE40_RS03210 0.47 -0.8 635,807 - ABIE40_RS03210 0.47 +0.3 635,807 - ABIE40_RS03210 0.47 +0.2 635,921 + ABIE40_RS03210 0.55 -1.2 635,921 + ABIE40_RS03210 0.55 +0.2 635,921 + ABIE40_RS03210 0.55 +0.3 635,921 + ABIE40_RS03210 0.55 -0.4 635,922 - ABIE40_RS03210 0.55 +0.1 635,922 - ABIE40_RS03210 0.55 -0.3 635,922 - ABIE40_RS03210 0.55 -0.1 635,922 - ABIE40_RS03210 0.55 +1.3 635,922 - ABIE40_RS03210 0.55 +0.0 635,922 - ABIE40_RS03210 0.55 -1.0 635,922 - ABIE40_RS03210 0.55 -0.4 635,922 - ABIE40_RS03210 0.55 -0.1 635,922 - ABIE40_RS03210 0.55 -1.9 635,970 - ABIE40_RS03210 0.58 -0.6 635,970 - ABIE40_RS03210 0.58 +0.4 636,026 + ABIE40_RS03210 0.62 -0.1 636,056 + ABIE40_RS03210 0.64 +0.2 636,056 + ABIE40_RS03210 0.64 +0.5 636,056 + ABIE40_RS03210 0.64 -0.9 636,056 + ABIE40_RS03210 0.64 -0.4 636,056 + ABIE40_RS03210 0.64 -2.5 636,056 + ABIE40_RS03210 0.64 +1.0 636,057 - ABIE40_RS03210 0.64 +0.1 636,057 - ABIE40_RS03210 0.64 -0.8 636,057 - ABIE40_RS03210 0.64 +2.3 636,065 - ABIE40_RS03210 0.65 +0.0 636,065 - ABIE40_RS03210 0.65 -0.5 636,143 + ABIE40_RS03210 0.70 -2.9 636,144 - ABIE40_RS03210 0.70 +1.7 636,144 - ABIE40_RS03210 0.70 +0.5 636,144 - ABIE40_RS03210 0.70 -0.8 636,144 - ABIE40_RS03210 0.70 -1.0 636,272 + ABIE40_RS03210 0.79 +1.1 636,323 + ABIE40_RS03210 0.83 +2.5 636,324 - ABIE40_RS03210 0.83 +1.2 636,448 + -1.7 636,543 + -0.4 636,543 + +0.8 636,543 + -0.1 636,543 + +0.9 636,543 + -0.0 636,544 - +0.3 636,544 - -0.8 636,544 - +0.4 636,579 + -0.2 636,579 + +0.0 636,580 - +0.1 636,601 + -0.2 636,631 + -0.1 636,631 + +0.9 636,658 - +0.1 636,658 - -0.5 636,741 + +0.3 636,858 + ABIE40_RS03215 0.10 +0.9 636,859 - ABIE40_RS03215 0.10 +0.8 637,144 + ABIE40_RS03215 0.35 -2.7 637,144 + ABIE40_RS03215 0.35 +0.5 637,144 + ABIE40_RS03215 0.35 -1.1 637,144 + ABIE40_RS03215 0.35 +0.4 637,145 - ABIE40_RS03215 0.36 +1.2 637,145 - ABIE40_RS03215 0.36 +0.4 637,777 + +0.3 637,823 - +0.5 637,823 - -1.2 637,824 + -0.1 637,824 + +0.0 637,824 + +1.8 637,871 + +0.5 637,871 + +0.4 637,872 - -1.0 637,872 - +0.4 637,872 - -0.4 637,872 - -0.1 637,872 - -0.0 637,873 + -0.0 637,873 + +0.5 637,874 - +1.1 637,874 - +1.4 637,874 - +1.2 637,874 - -0.9 637,893 + +0.1 637,894 - +1.9 637,909 + +2.5 637,909 + -0.3 637,910 - -1.7 637,963 + +0.7 637,964 - -2.6 637,998 + -0.0 637,998 + +1.6 637,998 + -0.6 637,999 - +1.2 637,999 - +0.4 638,003 + -0.2 638,003 + -0.6 638,003 + -0.4 638,003 + +1.4 638,003 + -0.4 638,004 - +1.3 638,004 - +0.9 638,004 - +0.1 638,004 - +0.1 638,024 + -0.6 638,024 + -0.8 638,025 - +0.4 638,032 + -0.4 638,032 + +0.3 638,032 + +1.7 638,032 + +0.0 638,033 - -0.7 638,033 - -0.2 638,033 - +0.6 638,033 - -1.2 638,190 - -1.6 638,191 + -1.3 638,191 + +0.6 638,191 + -1.0 638,191 + +0.2 638,192 - +0.1 638,192 - +0.5 638,192 - -0.9 638,196 - -0.6 638,236 + -0.4 638,237 - +1.9 638,273 + -0.2 638,277 - +0.3 638,303 + -0.3 638,303 + +0.3 638,304 - -0.7 638,304 - +0.2 638,371 - -0.7 638,371 - -1.0 638,437 + -0.6 638,437 + +0.5 638,437 + +0.5 638,437 + -2.2 638,438 - +1.7 638,452 + +0.3 638,452 + +3.7 638,452 + +0.1 638,452 + +0.4 638,452 + +1.0 638,453 - -0.2 638,453 - +1.7 638,453 - +0.8 638,467 - +0.7 638,468 + -0.4 638,468 + +0.5 638,468 + +0.9 638,469 - -2.3 638,469 - -1.4 638,469 - +0.5 638,562 + -4.4 638,563 - +0.2 638,563 - +0.7 638,563 - -1.3 638,563 - +0.6 638,563 - -1.5 638,563 - -1.0 638,641 - -1.1 638,641 - +0.5 638,697 + +0.4 638,698 - +0.5 638,698 - -0.0 638,698 - +2.7 638,698 - +0.2 638,698 - +0.0 638,698 - +1.1 638,699 + +2.2 638,699 + +0.3
Or see this region's nucleotide sequence