Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS02635 and ABIE40_RS02640 are separated by 214 nucleotides ABIE40_RS02640 and ABIE40_RS02645 are separated by 127 nucleotides
ABIE40_RS02635: ABIE40_RS02635 - PAS domain-containing hybrid sensor histidine kinase/response regulator, at 522,207 to 525,704
_RS02635
ABIE40_RS02640: ABIE40_RS02640 - large conductance mechanosensitive channel protein MscL, at 525,919 to 526,350
_RS02640
ABIE40_RS02645: ABIE40_RS02645 - pyridoxal phosphate-dependent aminotransferase, at 526,478 to 527,644
_RS02645
Position (kb) 525
526
527 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 524.978 kb on - strand, within ABIE40_RS02635 at 525.108 kb on - strand, within ABIE40_RS02635 at 525.223 kb on + strand, within ABIE40_RS02635 at 525.224 kb on - strand, within ABIE40_RS02635 at 525.224 kb on - strand, within ABIE40_RS02635 at 525.273 kb on + strand, within ABIE40_RS02635 at 525.273 kb on + strand, within ABIE40_RS02635 at 525.274 kb on - strand, within ABIE40_RS02635 at 525.310 kb on + strand, within ABIE40_RS02635 at 525.310 kb on + strand, within ABIE40_RS02635 at 525.310 kb on + strand, within ABIE40_RS02635 at 525.310 kb on + strand, within ABIE40_RS02635 at 525.310 kb on + strand, within ABIE40_RS02635 at 525.311 kb on - strand, within ABIE40_RS02635 at 525.311 kb on - strand, within ABIE40_RS02635 at 525.333 kb on + strand, within ABIE40_RS02635 at 525.484 kb on + strand at 525.484 kb on + strand at 525.484 kb on + strand at 525.484 kb on + strand at 525.484 kb on + strand at 525.484 kb on + strand at 525.484 kb on + strand at 525.484 kb on + strand at 525.484 kb on + strand at 525.485 kb on - strand at 525.485 kb on - strand at 525.485 kb on - strand at 525.485 kb on - strand at 525.485 kb on - strand at 525.485 kb on - strand at 525.485 kb on - strand at 525.485 kb on - strand at 525.539 kb on - strand at 525.539 kb on - strand at 525.556 kb on + strand at 525.556 kb on + strand at 525.556 kb on + strand at 525.556 kb on + strand at 525.556 kb on + strand at 525.556 kb on + strand at 525.557 kb on - strand at 525.557 kb on - strand at 525.557 kb on - strand at 525.557 kb on - strand at 525.577 kb on + strand at 525.578 kb on - strand at 525.578 kb on - strand at 525.578 kb on - strand at 525.578 kb on - strand at 525.578 kb on - strand at 525.634 kb on + strand at 525.634 kb on + strand at 525.634 kb on + strand at 525.634 kb on + strand at 525.635 kb on - strand at 525.635 kb on - strand at 525.635 kb on - strand at 525.665 kb on - strand at 525.756 kb on + strand at 525.757 kb on - strand at 525.792 kb on + strand at 525.792 kb on + strand at 525.792 kb on + strand at 525.792 kb on + strand at 525.792 kb on + strand at 525.793 kb on - strand at 525.793 kb on - strand at 525.793 kb on - strand at 525.793 kb on - strand at 525.799 kb on + strand at 525.799 kb on + strand at 525.826 kb on + strand at 525.847 kb on + strand at 525.864 kb on + strand at 525.864 kb on + strand at 525.864 kb on + strand at 525.864 kb on + strand at 525.864 kb on + strand at 525.865 kb on - strand at 525.865 kb on - strand at 525.865 kb on - strand at 525.865 kb on - strand at 525.865 kb on - strand at 525.868 kb on + strand at 525.868 kb on + strand at 525.868 kb on + strand at 525.869 kb on - strand at 525.869 kb on - strand at 525.869 kb on - strand at 525.869 kb on - strand at 525.873 kb on - strand at 525.873 kb on - strand at 525.942 kb on + strand at 525.943 kb on - strand at 526.030 kb on - strand, within ABIE40_RS02640 at 526.042 kb on - strand, within ABIE40_RS02640 at 526.082 kb on - strand, within ABIE40_RS02640 at 526.082 kb on - strand, within ABIE40_RS02640 at 526.082 kb on - strand, within ABIE40_RS02640 at 526.082 kb on - strand, within ABIE40_RS02640 at 526.167 kb on + strand, within ABIE40_RS02640 at 526.168 kb on - strand, within ABIE40_RS02640 at 526.452 kb on + strand at 526.452 kb on + strand at 526.452 kb on + strand at 526.452 kb on + strand at 526.452 kb on + strand at 526.452 kb on + strand at 526.452 kb on + strand at 526.452 kb on + strand at 526.453 kb on - strand at 526.453 kb on - strand at 526.453 kb on - strand at 526.453 kb on - strand at 526.453 kb on - strand at 526.453 kb on - strand at 526.453 kb on - strand at 526.453 kb on - strand at 526.453 kb on - strand at 526.453 kb on - strand at 526.453 kb on - strand at 526.453 kb on - strand at 526.453 kb on - strand at 526.493 kb on - strand at 526.550 kb on + strand at 526.550 kb on + strand at 526.550 kb on + strand at 526.550 kb on + strand at 526.550 kb on + strand at 526.551 kb on - strand at 526.551 kb on - strand at 526.551 kb on - strand at 526.551 kb on - strand at 526.664 kb on + strand, within ABIE40_RS02645 at 526.664 kb on + strand, within ABIE40_RS02645 at 526.664 kb on + strand, within ABIE40_RS02645 at 526.664 kb on + strand, within ABIE40_RS02645 at 526.664 kb on + strand, within ABIE40_RS02645 at 526.665 kb on - strand, within ABIE40_RS02645 at 526.665 kb on - strand, within ABIE40_RS02645 at 526.665 kb on - strand, within ABIE40_RS02645 at 526.665 kb on - strand, within ABIE40_RS02645 at 526.712 kb on + strand, within ABIE40_RS02645 at 526.712 kb on + strand, within ABIE40_RS02645 at 526.713 kb on - strand, within ABIE40_RS02645 at 526.713 kb on - strand, within ABIE40_RS02645 at 526.713 kb on - strand, within ABIE40_RS02645 at 526.715 kb on + strand, within ABIE40_RS02645 at 526.715 kb on + strand, within ABIE40_RS02645 at 526.715 kb on + strand, within ABIE40_RS02645 at 526.715 kb on + strand, within ABIE40_RS02645 at 526.715 kb on + strand, within ABIE40_RS02645 at 526.716 kb on - strand, within ABIE40_RS02645 at 526.716 kb on - strand, within ABIE40_RS02645 at 526.757 kb on + strand, within ABIE40_RS02645 at 526.757 kb on + strand, within ABIE40_RS02645 at 526.757 kb on + strand, within ABIE40_RS02645 at 526.757 kb on + strand, within ABIE40_RS02645 at 526.757 kb on + strand, within ABIE40_RS02645 at 526.758 kb on - strand, within ABIE40_RS02645 at 526.758 kb on - strand, within ABIE40_RS02645 at 526.758 kb on - strand, within ABIE40_RS02645 at 526.758 kb on - strand, within ABIE40_RS02645 at 526.832 kb on + strand, within ABIE40_RS02645 at 526.893 kb on + strand, within ABIE40_RS02645 at 526.893 kb on + strand, within ABIE40_RS02645 at 526.894 kb on - strand, within ABIE40_RS02645 at 526.894 kb on - strand, within ABIE40_RS02645 at 527.091 kb on + strand, within ABIE40_RS02645 at 527.091 kb on + strand, within ABIE40_RS02645 at 527.091 kb on + strand, within ABIE40_RS02645 at 527.092 kb on - strand, within ABIE40_RS02645 at 527.092 kb on - strand, within ABIE40_RS02645 at 527.092 kb on - strand, within ABIE40_RS02645 at 527.092 kb on - strand, within ABIE40_RS02645 at 527.092 kb on - strand, within ABIE40_RS02645 at 527.092 kb on - strand, within ABIE40_RS02645 at 527.092 kb on - strand, within ABIE40_RS02645 at 527.092 kb on - strand, within ABIE40_RS02645 at 527.093 kb on + strand, within ABIE40_RS02645 at 527.093 kb on + strand, within ABIE40_RS02645 at 527.093 kb on + strand, within ABIE40_RS02645 at 527.093 kb on + strand, within ABIE40_RS02645 at 527.093 kb on + strand, within ABIE40_RS02645 at 527.093 kb on + strand, within ABIE40_RS02645 at 527.093 kb on + strand, within ABIE40_RS02645 at 527.093 kb on + strand, within ABIE40_RS02645 at 527.093 kb on + strand, within ABIE40_RS02645 at 527.094 kb on - strand, within ABIE40_RS02645 at 527.094 kb on - strand, within ABIE40_RS02645 at 527.094 kb on - strand, within ABIE40_RS02645 at 527.094 kb on - strand, within ABIE40_RS02645 at 527.094 kb on - strand, within ABIE40_RS02645 at 527.094 kb on - strand, within ABIE40_RS02645 at 527.094 kb on - strand, within ABIE40_RS02645 at 527.094 kb on - strand, within ABIE40_RS02645 at 527.094 kb on - strand, within ABIE40_RS02645 at 527.103 kb on - strand, within ABIE40_RS02645 at 527.108 kb on + strand, within ABIE40_RS02645 at 527.108 kb on + strand, within ABIE40_RS02645 at 527.108 kb on + strand, within ABIE40_RS02645 at 527.109 kb on - strand, within ABIE40_RS02645 at 527.197 kb on + strand, within ABIE40_RS02645 at 527.197 kb on + strand, within ABIE40_RS02645 at 527.197 kb on + strand, within ABIE40_RS02645 at 527.197 kb on + strand, within ABIE40_RS02645 at 527.198 kb on - strand, within ABIE40_RS02645 at 527.198 kb on - strand, within ABIE40_RS02645 at 527.198 kb on - strand, within ABIE40_RS02645 at 527.198 kb on - strand, within ABIE40_RS02645 at 527.270 kb on + strand, within ABIE40_RS02645 at 527.270 kb on + strand, within ABIE40_RS02645
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 524,978 - ABIE40_RS02635 0.79 -1.0 525,108 - ABIE40_RS02635 0.83 -0.2 525,223 + ABIE40_RS02635 0.86 -0.4 525,224 - ABIE40_RS02635 0.86 -0.7 525,224 - ABIE40_RS02635 0.86 -0.2 525,273 + ABIE40_RS02635 0.88 +0.3 525,273 + ABIE40_RS02635 0.88 -1.8 525,274 - ABIE40_RS02635 0.88 -0.7 525,310 + ABIE40_RS02635 0.89 +1.4 525,310 + ABIE40_RS02635 0.89 +0.6 525,310 + ABIE40_RS02635 0.89 -0.9 525,310 + ABIE40_RS02635 0.89 +0.2 525,310 + ABIE40_RS02635 0.89 -0.1 525,311 - ABIE40_RS02635 0.89 +1.0 525,311 - ABIE40_RS02635 0.89 +1.2 525,333 + ABIE40_RS02635 0.89 +1.5 525,484 + -1.0 525,484 + -0.9 525,484 + +0.4 525,484 + -1.4 525,484 + +1.3 525,484 + -0.1 525,484 + -1.5 525,484 + +0.4 525,484 + +0.2 525,485 - +1.8 525,485 - -1.9 525,485 - +1.1 525,485 - -0.8 525,485 - -0.5 525,485 - -0.9 525,485 - -0.4 525,485 - -0.4 525,539 - -2.0 525,539 - +0.1 525,556 + +0.1 525,556 + -0.8 525,556 + -0.3 525,556 + +0.6 525,556 + -0.5 525,556 + +0.0 525,557 - +0.4 525,557 - -1.5 525,557 - +0.3 525,557 - +0.0 525,577 + -0.6 525,578 - -0.1 525,578 - +1.3 525,578 - +0.6 525,578 - -0.0 525,578 - -1.9 525,634 + -0.2 525,634 + +0.2 525,634 + -0.5 525,634 + -1.2 525,635 - +0.3 525,635 - -0.4 525,635 - -0.2 525,665 - -0.7 525,756 + -0.5 525,757 - +0.3 525,792 + -0.1 525,792 + +0.2 525,792 + +0.6 525,792 + -0.3 525,792 + -1.6 525,793 - -0.3 525,793 - -0.7 525,793 - -1.3 525,793 - +0.5 525,799 + +0.1 525,799 + -3.5 525,826 + +0.1 525,847 + -1.2 525,864 + -0.5 525,864 + +0.5 525,864 + -0.5 525,864 + -0.3 525,864 + -0.2 525,865 - -1.6 525,865 - +1.3 525,865 - +1.6 525,865 - +0.0 525,865 - +0.0 525,868 + +0.6 525,868 + -1.1 525,868 + +1.0 525,869 - -1.5 525,869 - +1.6 525,869 - -1.2 525,869 - +0.9 525,873 - -0.6 525,873 - +0.0 525,942 + +0.8 525,943 - +0.1 526,030 - ABIE40_RS02640 0.26 +0.3 526,042 - ABIE40_RS02640 0.28 +1.8 526,082 - ABIE40_RS02640 0.38 -0.4 526,082 - ABIE40_RS02640 0.38 +0.5 526,082 - ABIE40_RS02640 0.38 +2.0 526,082 - ABIE40_RS02640 0.38 +0.2 526,167 + ABIE40_RS02640 0.57 +0.3 526,168 - ABIE40_RS02640 0.58 -1.8 526,452 + +0.4 526,452 + +1.1 526,452 + -0.2 526,452 + +1.2 526,452 + -0.0 526,452 + -0.5 526,452 + +0.1 526,452 + -1.2 526,453 - -0.1 526,453 - +0.7 526,453 - +2.0 526,453 - +0.1 526,453 - +1.1 526,453 - +0.8 526,453 - +0.2 526,453 - +4.4 526,453 - -0.6 526,453 - -1.5 526,453 - -0.3 526,453 - +1.5 526,453 - -0.1 526,493 - -0.3 526,550 + -2.6 526,550 + +0.1 526,550 + -0.5 526,550 + -0.7 526,550 + +0.0 526,551 - -0.4 526,551 - -0.0 526,551 - -0.3 526,551 - -2.7 526,664 + ABIE40_RS02645 0.16 -0.1 526,664 + ABIE40_RS02645 0.16 -0.2 526,664 + ABIE40_RS02645 0.16 -0.3 526,664 + ABIE40_RS02645 0.16 +0.0 526,664 + ABIE40_RS02645 0.16 +0.5 526,665 - ABIE40_RS02645 0.16 -1.2 526,665 - ABIE40_RS02645 0.16 -1.6 526,665 - ABIE40_RS02645 0.16 +0.1 526,665 - ABIE40_RS02645 0.16 -0.1 526,712 + ABIE40_RS02645 0.20 -0.3 526,712 + ABIE40_RS02645 0.20 +0.2 526,713 - ABIE40_RS02645 0.20 -0.1 526,713 - ABIE40_RS02645 0.20 -0.5 526,713 - ABIE40_RS02645 0.20 -0.2 526,715 + ABIE40_RS02645 0.20 +0.6 526,715 + ABIE40_RS02645 0.20 +0.3 526,715 + ABIE40_RS02645 0.20 -0.9 526,715 + ABIE40_RS02645 0.20 -0.8 526,715 + ABIE40_RS02645 0.20 -0.2 526,716 - ABIE40_RS02645 0.20 -0.6 526,716 - ABIE40_RS02645 0.20 +0.5 526,757 + ABIE40_RS02645 0.24 +0.8 526,757 + ABIE40_RS02645 0.24 -0.2 526,757 + ABIE40_RS02645 0.24 +2.4 526,757 + ABIE40_RS02645 0.24 -0.6 526,757 + ABIE40_RS02645 0.24 +0.1 526,758 - ABIE40_RS02645 0.24 +0.2 526,758 - ABIE40_RS02645 0.24 +0.1 526,758 - ABIE40_RS02645 0.24 +0.5 526,758 - ABIE40_RS02645 0.24 +0.1 526,832 + ABIE40_RS02645 0.30 +0.8 526,893 + ABIE40_RS02645 0.36 +0.5 526,893 + ABIE40_RS02645 0.36 -1.5 526,894 - ABIE40_RS02645 0.36 +0.0 526,894 - ABIE40_RS02645 0.36 +1.4 527,091 + ABIE40_RS02645 0.53 -0.1 527,091 + ABIE40_RS02645 0.53 +1.1 527,091 + ABIE40_RS02645 0.53 -1.3 527,092 - ABIE40_RS02645 0.53 -1.1 527,092 - ABIE40_RS02645 0.53 +0.1 527,092 - ABIE40_RS02645 0.53 +0.5 527,092 - ABIE40_RS02645 0.53 -0.5 527,092 - ABIE40_RS02645 0.53 +0.4 527,092 - ABIE40_RS02645 0.53 -0.5 527,092 - ABIE40_RS02645 0.53 -0.7 527,092 - ABIE40_RS02645 0.53 +0.2 527,093 + ABIE40_RS02645 0.53 -0.8 527,093 + ABIE40_RS02645 0.53 +0.3 527,093 + ABIE40_RS02645 0.53 -1.8 527,093 + ABIE40_RS02645 0.53 -0.1 527,093 + ABIE40_RS02645 0.53 -0.6 527,093 + ABIE40_RS02645 0.53 -0.9 527,093 + ABIE40_RS02645 0.53 -0.3 527,093 + ABIE40_RS02645 0.53 -0.5 527,093 + ABIE40_RS02645 0.53 -0.5 527,094 - ABIE40_RS02645 0.53 +0.9 527,094 - ABIE40_RS02645 0.53 -0.5 527,094 - ABIE40_RS02645 0.53 +0.1 527,094 - ABIE40_RS02645 0.53 +0.2 527,094 - ABIE40_RS02645 0.53 -0.8 527,094 - ABIE40_RS02645 0.53 -0.5 527,094 - ABIE40_RS02645 0.53 +0.4 527,094 - ABIE40_RS02645 0.53 -0.9 527,094 - ABIE40_RS02645 0.53 -0.3 527,103 - ABIE40_RS02645 0.54 -1.4 527,108 + ABIE40_RS02645 0.54 -0.1 527,108 + ABIE40_RS02645 0.54 -0.3 527,108 + ABIE40_RS02645 0.54 -2.0 527,109 - ABIE40_RS02645 0.54 +0.1 527,197 + ABIE40_RS02645 0.62 +1.3 527,197 + ABIE40_RS02645 0.62 +0.2 527,197 + ABIE40_RS02645 0.62 -1.5 527,197 + ABIE40_RS02645 0.62 -1.0 527,198 - ABIE40_RS02645 0.62 -0.9 527,198 - ABIE40_RS02645 0.62 -0.6 527,198 - ABIE40_RS02645 0.62 -1.3 527,198 - ABIE40_RS02645 0.62 -1.9 527,270 + ABIE40_RS02645 0.68 -0.1 527,270 + ABIE40_RS02645 0.68 +0.2
Or see this region's nucleotide sequence