Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS02580 and ABIE40_RS02585 are separated by 37 nucleotides ABIE40_RS02585 and ABIE40_RS02590 are separated by 13 nucleotides
ABIE40_RS02580: ABIE40_RS02580 - acyl-CoA dehydrogenase C-terminal domain-containing protein, at 508,863 to 510,659
_RS02580
ABIE40_RS02585: ABIE40_RS02585 - acetyl-CoA C-acetyltransferase, at 510,697 to 511,905
_RS02585
ABIE40_RS02590: ABIE40_RS02590 - FAD-dependent oxidoreductase, at 511,919 to 514,133
_RS02590
Position (kb) 510
511
512 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 509.811 kb on + strand, within ABIE40_RS02580 at 509.811 kb on + strand, within ABIE40_RS02580 at 509.812 kb on - strand, within ABIE40_RS02580 at 509.812 kb on - strand, within ABIE40_RS02580 at 510.123 kb on + strand, within ABIE40_RS02580 at 510.123 kb on + strand, within ABIE40_RS02580 at 510.123 kb on + strand, within ABIE40_RS02580 at 510.124 kb on - strand, within ABIE40_RS02580 at 510.124 kb on - strand, within ABIE40_RS02580 at 510.124 kb on - strand, within ABIE40_RS02580 at 510.124 kb on - strand, within ABIE40_RS02580 at 510.125 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.150 kb on + strand, within ABIE40_RS02580 at 510.151 kb on - strand, within ABIE40_RS02580 at 510.151 kb on - strand, within ABIE40_RS02580 at 510.180 kb on + strand, within ABIE40_RS02580 at 510.181 kb on - strand, within ABIE40_RS02580 at 510.181 kb on - strand, within ABIE40_RS02580 at 510.181 kb on - strand, within ABIE40_RS02580 at 510.181 kb on - strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.429 kb on + strand, within ABIE40_RS02580 at 510.430 kb on - strand, within ABIE40_RS02580 at 510.430 kb on - strand, within ABIE40_RS02580 at 510.462 kb on + strand, within ABIE40_RS02580 at 510.462 kb on + strand, within ABIE40_RS02580 at 510.462 kb on + strand, within ABIE40_RS02580 at 510.462 kb on + strand, within ABIE40_RS02580 at 510.462 kb on + strand, within ABIE40_RS02580 at 510.463 kb on - strand, within ABIE40_RS02580 at 510.463 kb on - strand, within ABIE40_RS02580 at 510.463 kb on - strand, within ABIE40_RS02580 at 510.463 kb on - strand, within ABIE40_RS02580 at 510.463 kb on - strand, within ABIE40_RS02580 at 510.531 kb on + strand at 510.564 kb on + strand at 510.564 kb on + strand at 510.564 kb on + strand at 510.564 kb on + strand at 510.564 kb on + strand at 510.564 kb on + strand at 510.564 kb on + strand at 510.565 kb on - strand at 510.565 kb on - strand at 510.707 kb on + strand at 510.707 kb on + strand at 510.707 kb on + strand at 510.707 kb on + strand at 510.707 kb on + strand at 510.707 kb on + strand at 510.708 kb on - strand at 510.715 kb on + strand at 510.715 kb on + strand at 510.716 kb on - strand at 510.716 kb on - strand at 510.855 kb on + strand, within ABIE40_RS02585 at 510.855 kb on + strand, within ABIE40_RS02585 at 510.855 kb on + strand, within ABIE40_RS02585 at 510.855 kb on + strand, within ABIE40_RS02585 at 510.856 kb on - strand, within ABIE40_RS02585 at 510.856 kb on - strand, within ABIE40_RS02585 at 510.856 kb on - strand, within ABIE40_RS02585 at 510.856 kb on - strand, within ABIE40_RS02585 at 510.928 kb on + strand, within ABIE40_RS02585 at 510.928 kb on + strand, within ABIE40_RS02585 at 510.928 kb on + strand, within ABIE40_RS02585 at 510.929 kb on - strand, within ABIE40_RS02585 at 510.929 kb on - strand, within ABIE40_RS02585 at 510.929 kb on - strand, within ABIE40_RS02585 at 510.929 kb on - strand, within ABIE40_RS02585 at 511.126 kb on + strand, within ABIE40_RS02585 at 511.127 kb on - strand, within ABIE40_RS02585 at 511.127 kb on - strand, within ABIE40_RS02585 at 511.171 kb on + strand, within ABIE40_RS02585 at 511.171 kb on + strand, within ABIE40_RS02585 at 511.171 kb on + strand, within ABIE40_RS02585 at 511.201 kb on + strand, within ABIE40_RS02585 at 511.202 kb on - strand, within ABIE40_RS02585 at 511.202 kb on - strand, within ABIE40_RS02585 at 511.249 kb on + strand, within ABIE40_RS02585 at 511.249 kb on + strand, within ABIE40_RS02585 at 511.249 kb on + strand, within ABIE40_RS02585 at 511.250 kb on - strand, within ABIE40_RS02585 at 511.250 kb on - strand, within ABIE40_RS02585 at 511.441 kb on + strand, within ABIE40_RS02585 at 511.441 kb on + strand, within ABIE40_RS02585 at 511.441 kb on + strand, within ABIE40_RS02585 at 511.441 kb on + strand, within ABIE40_RS02585 at 511.441 kb on + strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.442 kb on - strand, within ABIE40_RS02585 at 511.654 kb on - strand, within ABIE40_RS02585 at 511.702 kb on + strand, within ABIE40_RS02585 at 511.702 kb on + strand, within ABIE40_RS02585 at 511.702 kb on + strand, within ABIE40_RS02585 at 511.703 kb on - strand, within ABIE40_RS02585 at 511.703 kb on - strand, within ABIE40_RS02585 at 511.703 kb on - strand, within ABIE40_RS02585 at 511.703 kb on - strand, within ABIE40_RS02585 at 511.703 kb on - strand, within ABIE40_RS02585 at 511.703 kb on - strand, within ABIE40_RS02585 at 511.703 kb on - strand, within ABIE40_RS02585 at 511.925 kb on + strand at 511.925 kb on + strand at 511.925 kb on + strand at 511.925 kb on + strand at 511.926 kb on - strand at 511.926 kb on - strand at 511.926 kb on - strand at 512.154 kb on + strand, within ABIE40_RS02590 at 512.695 kb on - strand, within ABIE40_RS02590 at 512.695 kb on - strand, within ABIE40_RS02590 at 512.727 kb on + strand, within ABIE40_RS02590 at 512.728 kb on - strand, within ABIE40_RS02590 at 512.728 kb on - strand, within ABIE40_RS02590 at 512.728 kb on - strand, within ABIE40_RS02590 at 512.728 kb on - strand, within ABIE40_RS02590 at 512.728 kb on - strand, within ABIE40_RS02590 at 512.778 kb on + strand, within ABIE40_RS02590
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 509,811 + ABIE40_RS02580 0.53 -1.9 509,811 + ABIE40_RS02580 0.53 -4.2 509,812 - ABIE40_RS02580 0.53 -4.1 509,812 - ABIE40_RS02580 0.53 -3.8 510,123 + ABIE40_RS02580 0.70 +0.2 510,123 + ABIE40_RS02580 0.70 -0.2 510,123 + ABIE40_RS02580 0.70 -2.7 510,124 - ABIE40_RS02580 0.70 -3.1 510,124 - ABIE40_RS02580 0.70 -3.2 510,124 - ABIE40_RS02580 0.70 -4.3 510,124 - ABIE40_RS02580 0.70 -2.3 510,125 + ABIE40_RS02580 0.70 -3.7 510,150 + ABIE40_RS02580 0.72 -1.5 510,150 + ABIE40_RS02580 0.72 -2.0 510,150 + ABIE40_RS02580 0.72 -3.9 510,150 + ABIE40_RS02580 0.72 -3.3 510,150 + ABIE40_RS02580 0.72 -2.3 510,150 + ABIE40_RS02580 0.72 -0.5 510,150 + ABIE40_RS02580 0.72 -2.0 510,151 - ABIE40_RS02580 0.72 -1.6 510,151 - ABIE40_RS02580 0.72 -2.2 510,180 + ABIE40_RS02580 0.73 -0.8 510,181 - ABIE40_RS02580 0.73 -2.2 510,181 - ABIE40_RS02580 0.73 +1.8 510,181 - ABIE40_RS02580 0.73 -1.7 510,181 - ABIE40_RS02580 0.73 -3.8 510,429 + ABIE40_RS02580 0.87 -0.8 510,429 + ABIE40_RS02580 0.87 -1.4 510,429 + ABIE40_RS02580 0.87 -4.2 510,429 + ABIE40_RS02580 0.87 -2.8 510,429 + ABIE40_RS02580 0.87 -1.8 510,429 + ABIE40_RS02580 0.87 -0.2 510,429 + ABIE40_RS02580 0.87 -1.7 510,430 - ABIE40_RS02580 0.87 -2.3 510,430 - ABIE40_RS02580 0.87 -3.6 510,462 + ABIE40_RS02580 0.89 -4.0 510,462 + ABIE40_RS02580 0.89 -3.6 510,462 + ABIE40_RS02580 0.89 +1.6 510,462 + ABIE40_RS02580 0.89 -3.3 510,462 + ABIE40_RS02580 0.89 -1.8 510,463 - ABIE40_RS02580 0.89 -1.0 510,463 - ABIE40_RS02580 0.89 -1.8 510,463 - ABIE40_RS02580 0.89 -3.8 510,463 - ABIE40_RS02580 0.89 -3.9 510,463 - ABIE40_RS02580 0.89 -4.6 510,531 + -2.0 510,564 + -3.9 510,564 + -2.2 510,564 + -3.1 510,564 + -2.4 510,564 + -2.5 510,564 + -2.6 510,564 + -1.7 510,565 - -1.8 510,565 - -1.0 510,707 + -2.5 510,707 + -2.9 510,707 + -4.8 510,707 + -3.9 510,707 + -3.2 510,707 + -2.4 510,708 - -1.0 510,715 + -4.0 510,715 + -3.9 510,716 - -3.8 510,716 - -3.0 510,855 + ABIE40_RS02585 0.13 -1.4 510,855 + ABIE40_RS02585 0.13 -1.5 510,855 + ABIE40_RS02585 0.13 -2.9 510,855 + ABIE40_RS02585 0.13 -1.9 510,856 - ABIE40_RS02585 0.13 -4.5 510,856 - ABIE40_RS02585 0.13 -2.3 510,856 - ABIE40_RS02585 0.13 -3.9 510,856 - ABIE40_RS02585 0.13 -2.7 510,928 + ABIE40_RS02585 0.19 -3.5 510,928 + ABIE40_RS02585 0.19 -2.9 510,928 + ABIE40_RS02585 0.19 -4.1 510,929 - ABIE40_RS02585 0.19 -2.5 510,929 - ABIE40_RS02585 0.19 -1.4 510,929 - ABIE40_RS02585 0.19 -2.6 510,929 - ABIE40_RS02585 0.19 -3.0 511,126 + ABIE40_RS02585 0.35 -3.0 511,127 - ABIE40_RS02585 0.36 -2.0 511,127 - ABIE40_RS02585 0.36 -4.5 511,171 + ABIE40_RS02585 0.39 -4.6 511,171 + ABIE40_RS02585 0.39 -1.9 511,171 + ABIE40_RS02585 0.39 -3.4 511,201 + ABIE40_RS02585 0.42 -4.1 511,202 - ABIE40_RS02585 0.42 -1.0 511,202 - ABIE40_RS02585 0.42 -5.4 511,249 + ABIE40_RS02585 0.46 -2.5 511,249 + ABIE40_RS02585 0.46 -2.2 511,249 + ABIE40_RS02585 0.46 -4.4 511,250 - ABIE40_RS02585 0.46 -2.6 511,250 - ABIE40_RS02585 0.46 -3.9 511,441 + ABIE40_RS02585 0.62 -2.7 511,441 + ABIE40_RS02585 0.62 -2.6 511,441 + ABIE40_RS02585 0.62 -2.7 511,441 + ABIE40_RS02585 0.62 -2.2 511,441 + ABIE40_RS02585 0.62 -0.5 511,442 - ABIE40_RS02585 0.62 -4.7 511,442 - ABIE40_RS02585 0.62 -3.5 511,442 - ABIE40_RS02585 0.62 -0.7 511,442 - ABIE40_RS02585 0.62 -2.7 511,442 - ABIE40_RS02585 0.62 -1.4 511,442 - ABIE40_RS02585 0.62 -4.4 511,442 - ABIE40_RS02585 0.62 -1.0 511,654 - ABIE40_RS02585 0.79 -5.1 511,702 + ABIE40_RS02585 0.83 -3.8 511,702 + ABIE40_RS02585 0.83 -3.7 511,702 + ABIE40_RS02585 0.83 -2.7 511,703 - ABIE40_RS02585 0.83 -3.7 511,703 - ABIE40_RS02585 0.83 -3.6 511,703 - ABIE40_RS02585 0.83 -1.8 511,703 - ABIE40_RS02585 0.83 -5.3 511,703 - ABIE40_RS02585 0.83 -0.8 511,703 - ABIE40_RS02585 0.83 -2.9 511,703 - ABIE40_RS02585 0.83 -1.9 511,925 + -2.4 511,925 + -1.4 511,925 + -0.5 511,925 + -2.3 511,926 - -2.9 511,926 - -2.9 511,926 - -2.0 512,154 + ABIE40_RS02590 0.11 -1.5 512,695 - ABIE40_RS02590 0.35 -1.5 512,695 - ABIE40_RS02590 0.35 -2.5 512,727 + ABIE40_RS02590 0.36 -4.4 512,728 - ABIE40_RS02590 0.37 -3.3 512,728 - ABIE40_RS02590 0.37 -2.0 512,728 - ABIE40_RS02590 0.37 -3.8 512,728 - ABIE40_RS02590 0.37 -1.2 512,728 - ABIE40_RS02590 0.37 -2.2 512,778 + ABIE40_RS02590 0.39 -2.0
Or see this region's nucleotide sequence