Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS01940 and ABIE40_RS01945 are separated by 49 nucleotides ABIE40_RS01945 and ABIE40_RS01950 are separated by 101 nucleotides ABIE40_RS01950 and ABIE40_RS01955 are separated by 174 nucleotides
ABIE40_RS01940: ABIE40_RS01940 - LOG family protein, at 382,206 to 383,072
_RS01940
ABIE40_RS01945: ABIE40_RS01945 - calcium-binding protein, at 383,122 to 383,733
_RS01945
ABIE40_RS01950: ABIE40_RS01950 - pyrimidine 5'-nucleotidase, at 383,835 to 384,542
_RS01950
ABIE40_RS01955: ABIE40_RS01955 - magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase, at 384,717 to 386,240
_RS01955
Position (kb) 383
384 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 382.168 kb on - strand at 382.168 kb on - strand at 382.321 kb on + strand, within ABIE40_RS01940 at 382.332 kb on + strand, within ABIE40_RS01940 at 382.344 kb on + strand, within ABIE40_RS01940 at 382.344 kb on + strand, within ABIE40_RS01940 at 382.345 kb on - strand, within ABIE40_RS01940 at 382.345 kb on - strand, within ABIE40_RS01940 at 382.345 kb on - strand, within ABIE40_RS01940 at 382.409 kb on + strand, within ABIE40_RS01940 at 382.409 kb on + strand, within ABIE40_RS01940 at 382.409 kb on + strand, within ABIE40_RS01940 at 382.410 kb on - strand, within ABIE40_RS01940 at 382.410 kb on - strand, within ABIE40_RS01940 at 382.410 kb on - strand, within ABIE40_RS01940 at 382.551 kb on + strand, within ABIE40_RS01940 at 382.551 kb on + strand, within ABIE40_RS01940 at 382.552 kb on - strand, within ABIE40_RS01940 at 382.554 kb on + strand, within ABIE40_RS01940 at 382.554 kb on + strand, within ABIE40_RS01940 at 382.555 kb on - strand, within ABIE40_RS01940 at 382.555 kb on - strand, within ABIE40_RS01940 at 382.620 kb on + strand, within ABIE40_RS01940 at 382.620 kb on + strand, within ABIE40_RS01940 at 382.620 kb on + strand, within ABIE40_RS01940 at 382.620 kb on + strand, within ABIE40_RS01940 at 382.620 kb on + strand, within ABIE40_RS01940 at 382.620 kb on + strand, within ABIE40_RS01940 at 382.620 kb on + strand, within ABIE40_RS01940 at 382.620 kb on + strand, within ABIE40_RS01940 at 382.620 kb on + strand, within ABIE40_RS01940 at 382.621 kb on - strand, within ABIE40_RS01940 at 382.621 kb on - strand, within ABIE40_RS01940 at 382.621 kb on - strand, within ABIE40_RS01940 at 382.621 kb on - strand, within ABIE40_RS01940 at 382.621 kb on - strand, within ABIE40_RS01940 at 382.621 kb on - strand, within ABIE40_RS01940 at 382.621 kb on - strand, within ABIE40_RS01940 at 382.621 kb on - strand, within ABIE40_RS01940 at 382.621 kb on - strand, within ABIE40_RS01940 at 382.621 kb on - strand, within ABIE40_RS01940 at 382.621 kb on - strand, within ABIE40_RS01940 at 382.743 kb on + strand, within ABIE40_RS01940 at 382.743 kb on + strand, within ABIE40_RS01940 at 382.743 kb on + strand, within ABIE40_RS01940 at 382.743 kb on + strand, within ABIE40_RS01940 at 382.743 kb on + strand, within ABIE40_RS01940 at 382.744 kb on - strand, within ABIE40_RS01940 at 382.744 kb on - strand, within ABIE40_RS01940 at 382.744 kb on - strand, within ABIE40_RS01940 at 382.744 kb on - strand, within ABIE40_RS01940 at 382.744 kb on - strand, within ABIE40_RS01940 at 382.744 kb on - strand, within ABIE40_RS01940 at 382.744 kb on - strand, within ABIE40_RS01940 at 382.744 kb on - strand, within ABIE40_RS01940 at 382.777 kb on - strand, within ABIE40_RS01940 at 383.055 kb on + strand at 383.055 kb on + strand at 383.055 kb on + strand at 383.055 kb on + strand at 383.055 kb on + strand at 383.071 kb on - strand at 383.123 kb on + strand at 383.124 kb on - strand at 383.145 kb on + strand at 383.145 kb on + strand at 383.145 kb on + strand at 383.433 kb on - strand, within ABIE40_RS01945 at 383.433 kb on - strand, within ABIE40_RS01945 at 383.433 kb on - strand, within ABIE40_RS01945 at 383.715 kb on + strand at 383.715 kb on + strand at 383.716 kb on - strand at 383.716 kb on - strand at 383.716 kb on - strand at 383.716 kb on - strand at 383.716 kb on - strand at 383.729 kb on + strand at 383.729 kb on + strand at 383.729 kb on + strand at 383.729 kb on + strand at 383.729 kb on + strand at 383.730 kb on - strand at 383.733 kb on + strand at 383.774 kb on + strand at 383.801 kb on + strand at 383.801 kb on + strand at 383.802 kb on - strand at 383.802 kb on - strand at 383.802 kb on - strand at 383.802 kb on - strand at 383.802 kb on - strand at 383.811 kb on + strand at 383.812 kb on - strand at 383.812 kb on - strand at 383.812 kb on - strand at 383.812 kb on - strand at 383.832 kb on - strand at 384.067 kb on + strand, within ABIE40_RS01950 at 384.067 kb on + strand, within ABIE40_RS01950 at 384.068 kb on - strand, within ABIE40_RS01950 at 384.068 kb on - strand, within ABIE40_RS01950 at 384.068 kb on - strand, within ABIE40_RS01950 at 384.068 kb on - strand, within ABIE40_RS01950 at 384.068 kb on - strand, within ABIE40_RS01950 at 384.119 kb on + strand, within ABIE40_RS01950 at 384.346 kb on + strand, within ABIE40_RS01950 at 384.347 kb on - strand, within ABIE40_RS01950 at 384.349 kb on + strand, within ABIE40_RS01950 at 384.349 kb on + strand, within ABIE40_RS01950 at 384.349 kb on + strand, within ABIE40_RS01950 at 384.350 kb on - strand, within ABIE40_RS01950 at 384.350 kb on - strand, within ABIE40_RS01950 at 384.350 kb on - strand, within ABIE40_RS01950 at 384.350 kb on - strand, within ABIE40_RS01950 at 384.352 kb on + strand, within ABIE40_RS01950 at 384.353 kb on - strand, within ABIE40_RS01950 at 384.353 kb on - strand, within ABIE40_RS01950 at 384.353 kb on - strand, within ABIE40_RS01950 at 384.353 kb on - strand, within ABIE40_RS01950 at 384.409 kb on + strand, within ABIE40_RS01950 at 384.409 kb on + strand, within ABIE40_RS01950 at 384.409 kb on + strand, within ABIE40_RS01950 at 384.409 kb on + strand, within ABIE40_RS01950 at 384.409 kb on + strand, within ABIE40_RS01950 at 384.410 kb on - strand, within ABIE40_RS01950 at 384.410 kb on - strand, within ABIE40_RS01950 at 384.410 kb on - strand, within ABIE40_RS01950 at 384.410 kb on - strand, within ABIE40_RS01950 at 384.410 kb on - strand, within ABIE40_RS01950 at 384.410 kb on - strand, within ABIE40_RS01950 at 384.410 kb on - strand, within ABIE40_RS01950 at 384.551 kb on + strand at 384.551 kb on + strand at 384.552 kb on - strand at 384.641 kb on + strand at 384.670 kb on + strand at 384.670 kb on + strand at 384.670 kb on + strand at 384.670 kb on + strand at 384.670 kb on + strand at 384.670 kb on + strand at 384.670 kb on + strand at 384.670 kb on + strand at 384.670 kb on + strand at 384.671 kb on - strand at 384.671 kb on - strand at 384.671 kb on - strand at 384.671 kb on - strand at 384.671 kb on - strand at 384.671 kb on - strand at 384.671 kb on - strand at 384.684 kb on + strand at 384.684 kb on + strand at 384.684 kb on + strand at 384.684 kb on + strand at 384.684 kb on + strand at 384.684 kb on + strand at 384.685 kb on - strand at 384.685 kb on - strand at 384.685 kb on - strand at 384.685 kb on - strand at 384.685 kb on - strand at 384.690 kb on + strand at 384.691 kb on - strand at 384.691 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 382,168 - -1.2 382,168 - -0.6 382,321 + ABIE40_RS01940 0.13 +1.3 382,332 + ABIE40_RS01940 0.15 +0.4 382,344 + ABIE40_RS01940 0.16 -0.9 382,344 + ABIE40_RS01940 0.16 -0.7 382,345 - ABIE40_RS01940 0.16 +0.5 382,345 - ABIE40_RS01940 0.16 -1.1 382,345 - ABIE40_RS01940 0.16 +1.3 382,409 + ABIE40_RS01940 0.23 -1.2 382,409 + ABIE40_RS01940 0.23 -3.3 382,409 + ABIE40_RS01940 0.23 +0.3 382,410 - ABIE40_RS01940 0.24 -1.6 382,410 - ABIE40_RS01940 0.24 +1.8 382,410 - ABIE40_RS01940 0.24 -1.5 382,551 + ABIE40_RS01940 0.40 +0.2 382,551 + ABIE40_RS01940 0.40 +1.6 382,552 - ABIE40_RS01940 0.40 -0.1 382,554 + ABIE40_RS01940 0.40 -2.7 382,554 + ABIE40_RS01940 0.40 -0.6 382,555 - ABIE40_RS01940 0.40 +0.3 382,555 - ABIE40_RS01940 0.40 -0.2 382,620 + ABIE40_RS01940 0.48 -0.0 382,620 + ABIE40_RS01940 0.48 -0.1 382,620 + ABIE40_RS01940 0.48 +0.4 382,620 + ABIE40_RS01940 0.48 -0.5 382,620 + ABIE40_RS01940 0.48 -0.8 382,620 + ABIE40_RS01940 0.48 +0.5 382,620 + ABIE40_RS01940 0.48 +2.5 382,620 + ABIE40_RS01940 0.48 -1.3 382,620 + ABIE40_RS01940 0.48 -0.3 382,621 - ABIE40_RS01940 0.48 -0.3 382,621 - ABIE40_RS01940 0.48 -0.1 382,621 - ABIE40_RS01940 0.48 +0.8 382,621 - ABIE40_RS01940 0.48 -0.5 382,621 - ABIE40_RS01940 0.48 -2.1 382,621 - ABIE40_RS01940 0.48 +0.6 382,621 - ABIE40_RS01940 0.48 +0.5 382,621 - ABIE40_RS01940 0.48 -2.7 382,621 - ABIE40_RS01940 0.48 +0.4 382,621 - ABIE40_RS01940 0.48 -0.5 382,621 - ABIE40_RS01940 0.48 +0.9 382,743 + ABIE40_RS01940 0.62 -1.7 382,743 + ABIE40_RS01940 0.62 +1.0 382,743 + ABIE40_RS01940 0.62 +1.3 382,743 + ABIE40_RS01940 0.62 +0.5 382,743 + ABIE40_RS01940 0.62 -0.8 382,744 - ABIE40_RS01940 0.62 -0.0 382,744 - ABIE40_RS01940 0.62 -0.9 382,744 - ABIE40_RS01940 0.62 +2.7 382,744 - ABIE40_RS01940 0.62 +0.5 382,744 - ABIE40_RS01940 0.62 -0.6 382,744 - ABIE40_RS01940 0.62 +0.1 382,744 - ABIE40_RS01940 0.62 -0.1 382,744 - ABIE40_RS01940 0.62 +0.9 382,777 - ABIE40_RS01940 0.66 -0.2 383,055 + -1.2 383,055 + -1.1 383,055 + -1.1 383,055 + -0.7 383,055 + -2.0 383,071 - +0.4 383,123 + -0.0 383,124 - +0.8 383,145 + -0.2 383,145 + -0.2 383,145 + -0.6 383,433 - ABIE40_RS01945 0.51 +1.1 383,433 - ABIE40_RS01945 0.51 +0.6 383,433 - ABIE40_RS01945 0.51 +0.9 383,715 + +0.7 383,715 + +0.9 383,716 - -0.3 383,716 - +0.6 383,716 - +0.8 383,716 - -0.9 383,716 - +0.2 383,729 + -0.4 383,729 + -0.5 383,729 + -1.5 383,729 + +0.1 383,729 + -0.2 383,730 - +0.5 383,733 + +0.2 383,774 + -0.2 383,801 + +0.2 383,801 + +0.0 383,802 - +0.9 383,802 - +0.8 383,802 - -0.1 383,802 - -0.6 383,802 - -0.3 383,811 + +0.6 383,812 - -0.8 383,812 - +0.7 383,812 - -1.8 383,812 - -1.4 383,832 - +0.2 384,067 + ABIE40_RS01950 0.33 +0.6 384,067 + ABIE40_RS01950 0.33 -0.4 384,068 - ABIE40_RS01950 0.33 +1.8 384,068 - ABIE40_RS01950 0.33 -0.4 384,068 - ABIE40_RS01950 0.33 +0.6 384,068 - ABIE40_RS01950 0.33 +0.1 384,068 - ABIE40_RS01950 0.33 -1.9 384,119 + ABIE40_RS01950 0.40 +0.4 384,346 + ABIE40_RS01950 0.72 -0.9 384,347 - ABIE40_RS01950 0.72 +2.0 384,349 + ABIE40_RS01950 0.73 -0.3 384,349 + ABIE40_RS01950 0.73 +0.4 384,349 + ABIE40_RS01950 0.73 -0.2 384,350 - ABIE40_RS01950 0.73 +0.4 384,350 - ABIE40_RS01950 0.73 -0.2 384,350 - ABIE40_RS01950 0.73 +0.0 384,350 - ABIE40_RS01950 0.73 -0.3 384,352 + ABIE40_RS01950 0.73 -1.2 384,353 - ABIE40_RS01950 0.73 +0.4 384,353 - ABIE40_RS01950 0.73 -0.1 384,353 - ABIE40_RS01950 0.73 -2.0 384,353 - ABIE40_RS01950 0.73 +0.0 384,409 + ABIE40_RS01950 0.81 -0.8 384,409 + ABIE40_RS01950 0.81 -1.2 384,409 + ABIE40_RS01950 0.81 +0.4 384,409 + ABIE40_RS01950 0.81 -1.2 384,409 + ABIE40_RS01950 0.81 +1.2 384,410 - ABIE40_RS01950 0.81 -0.4 384,410 - ABIE40_RS01950 0.81 -2.6 384,410 - ABIE40_RS01950 0.81 +1.9 384,410 - ABIE40_RS01950 0.81 -0.2 384,410 - ABIE40_RS01950 0.81 -1.1 384,410 - ABIE40_RS01950 0.81 +0.2 384,410 - ABIE40_RS01950 0.81 -0.3 384,551 + -0.6 384,551 + +0.6 384,552 - +2.0 384,641 + -0.7 384,670 + +0.8 384,670 + +1.2 384,670 + +0.0 384,670 + -0.9 384,670 + +0.9 384,670 + -0.4 384,670 + -0.6 384,670 + -0.1 384,670 + -0.5 384,671 - +0.6 384,671 - -0.3 384,671 - -0.2 384,671 - -1.1 384,671 - -0.5 384,671 - -3.6 384,671 - +0.7 384,684 + -0.2 384,684 + -0.4 384,684 + -1.0 384,684 + -0.2 384,684 + +0.9 384,684 + -0.3 384,685 - -0.1 384,685 - -2.2 384,685 - +0.2 384,685 - -0.7 384,685 - +0.8 384,690 + +0.6 384,691 - -0.5 384,691 - +2.3
Or see this region's nucleotide sequence