Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS01700 and ABIE40_RS01705 are separated by 23 nucleotides ABIE40_RS01705 and ABIE40_RS01710 are separated by 49 nucleotides ABIE40_RS01710 and ABIE40_RS01715 are separated by 27 nucleotides
ABIE40_RS01700: ABIE40_RS01700 - PhoH family protein, at 334,826 to 335,878
_RS01700
ABIE40_RS01705: ABIE40_RS01705 - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 335,902 to 337,317
_RS01705
ABIE40_RS01710: ABIE40_RS01710 - lysophospholipid acyltransferase family protein, at 337,367 to 338,164
_RS01710
ABIE40_RS01715: ABIE40_RS01715 - Fur family transcriptional regulator, at 338,192 to 338,620
_RS01715
Position (kb) 335
336
337
338 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 335.224 kb on - strand, within ABIE40_RS01700 at 335.224 kb on - strand, within ABIE40_RS01700 at 335.236 kb on - strand, within ABIE40_RS01700 at 335.236 kb on - strand, within ABIE40_RS01700 at 335.251 kb on - strand, within ABIE40_RS01700 at 335.251 kb on - strand, within ABIE40_RS01700 at 335.385 kb on + strand, within ABIE40_RS01700 at 335.386 kb on - strand, within ABIE40_RS01700 at 335.450 kb on - strand, within ABIE40_RS01700 at 335.450 kb on - strand, within ABIE40_RS01700 at 335.450 kb on - strand, within ABIE40_RS01700 at 335.450 kb on - strand, within ABIE40_RS01700 at 335.450 kb on - strand, within ABIE40_RS01700 at 335.450 kb on - strand, within ABIE40_RS01700 at 335.450 kb on - strand, within ABIE40_RS01700 at 335.450 kb on - strand, within ABIE40_RS01700 at 335.450 kb on - strand, within ABIE40_RS01700 at 335.450 kb on - strand, within ABIE40_RS01700 at 335.452 kb on - strand, within ABIE40_RS01700 at 335.452 kb on - strand, within ABIE40_RS01700 at 335.452 kb on - strand, within ABIE40_RS01700 at 335.452 kb on - strand, within ABIE40_RS01700 at 335.452 kb on - strand, within ABIE40_RS01700 at 335.452 kb on - strand, within ABIE40_RS01700 at 335.452 kb on - strand, within ABIE40_RS01700 at 335.452 kb on - strand, within ABIE40_RS01700 at 335.723 kb on - strand, within ABIE40_RS01700 at 335.723 kb on - strand, within ABIE40_RS01700 at 335.964 kb on + strand at 335.964 kb on + strand at 335.965 kb on - strand at 335.965 kb on - strand at 336.198 kb on + strand, within ABIE40_RS01705 at 336.240 kb on - strand, within ABIE40_RS01705 at 336.268 kb on - strand, within ABIE40_RS01705 at 336.268 kb on - strand, within ABIE40_RS01705 at 336.328 kb on + strand, within ABIE40_RS01705 at 336.328 kb on + strand, within ABIE40_RS01705 at 336.328 kb on + strand, within ABIE40_RS01705 at 336.328 kb on + strand, within ABIE40_RS01705 at 336.328 kb on + strand, within ABIE40_RS01705 at 336.328 kb on + strand, within ABIE40_RS01705 at 336.328 kb on + strand, within ABIE40_RS01705 at 336.328 kb on + strand, within ABIE40_RS01705 at 336.328 kb on + strand, within ABIE40_RS01705 at 336.329 kb on - strand, within ABIE40_RS01705 at 336.329 kb on - strand, within ABIE40_RS01705 at 336.329 kb on - strand, within ABIE40_RS01705 at 336.329 kb on - strand, within ABIE40_RS01705 at 336.329 kb on - strand, within ABIE40_RS01705 at 336.329 kb on - strand, within ABIE40_RS01705 at 336.329 kb on - strand, within ABIE40_RS01705 at 336.329 kb on - strand, within ABIE40_RS01705 at 336.329 kb on - strand, within ABIE40_RS01705 at 336.329 kb on - strand, within ABIE40_RS01705 at 336.329 kb on - strand, within ABIE40_RS01705 at 336.329 kb on - strand, within ABIE40_RS01705 at 336.330 kb on + strand, within ABIE40_RS01705 at 336.330 kb on + strand, within ABIE40_RS01705 at 336.406 kb on - strand, within ABIE40_RS01705 at 336.446 kb on + strand, within ABIE40_RS01705 at 336.446 kb on + strand, within ABIE40_RS01705 at 336.446 kb on + strand, within ABIE40_RS01705 at 336.447 kb on - strand, within ABIE40_RS01705 at 336.522 kb on - strand, within ABIE40_RS01705 at 336.725 kb on + strand, within ABIE40_RS01705 at 336.725 kb on + strand, within ABIE40_RS01705 at 336.725 kb on + strand, within ABIE40_RS01705 at 336.725 kb on + strand, within ABIE40_RS01705 at 336.854 kb on + strand, within ABIE40_RS01705 at 336.854 kb on + strand, within ABIE40_RS01705 at 336.917 kb on + strand, within ABIE40_RS01705 at 336.917 kb on + strand, within ABIE40_RS01705 at 336.918 kb on - strand, within ABIE40_RS01705 at 336.918 kb on - strand, within ABIE40_RS01705 at 336.918 kb on - strand, within ABIE40_RS01705 at 336.918 kb on - strand, within ABIE40_RS01705 at 337.033 kb on + strand, within ABIE40_RS01705 at 337.073 kb on + strand, within ABIE40_RS01705 at 337.074 kb on - strand, within ABIE40_RS01705 at 337.074 kb on - strand, within ABIE40_RS01705 at 337.074 kb on - strand, within ABIE40_RS01705 at 337.101 kb on + strand, within ABIE40_RS01705 at 337.110 kb on + strand, within ABIE40_RS01705 at 337.110 kb on + strand, within ABIE40_RS01705 at 337.110 kb on + strand, within ABIE40_RS01705 at 337.111 kb on - strand, within ABIE40_RS01705 at 337.158 kb on - strand, within ABIE40_RS01705 at 337.199 kb on + strand at 337.199 kb on + strand at 337.200 kb on - strand at 337.220 kb on + strand at 337.220 kb on + strand at 337.220 kb on + strand at 337.221 kb on - strand at 337.221 kb on - strand at 337.221 kb on - strand at 337.221 kb on - strand at 337.221 kb on - strand at 337.221 kb on - strand at 337.221 kb on - strand at 337.221 kb on - strand at 337.221 kb on - strand at 337.221 kb on - strand at 337.221 kb on - strand at 337.325 kb on + strand at 337.330 kb on - strand at 337.330 kb on - strand at 337.579 kb on - strand, within ABIE40_RS01710 at 337.609 kb on + strand, within ABIE40_RS01710 at 337.609 kb on + strand, within ABIE40_RS01710 at 337.609 kb on + strand, within ABIE40_RS01710 at 337.609 kb on + strand, within ABIE40_RS01710 at 337.609 kb on + strand, within ABIE40_RS01710 at 337.609 kb on + strand, within ABIE40_RS01710 at 337.610 kb on - strand, within ABIE40_RS01710 at 337.610 kb on - strand, within ABIE40_RS01710 at 337.610 kb on - strand, within ABIE40_RS01710 at 337.611 kb on + strand, within ABIE40_RS01710 at 337.611 kb on + strand, within ABIE40_RS01710 at 337.611 kb on + strand, within ABIE40_RS01710 at 337.611 kb on + strand, within ABIE40_RS01710 at 337.611 kb on + strand, within ABIE40_RS01710 at 337.611 kb on + strand, within ABIE40_RS01710 at 337.612 kb on - strand, within ABIE40_RS01710 at 337.612 kb on - strand, within ABIE40_RS01710 at 337.612 kb on - strand, within ABIE40_RS01710 at 337.930 kb on + strand, within ABIE40_RS01710 at 337.931 kb on - strand, within ABIE40_RS01710 at 337.931 kb on - strand, within ABIE40_RS01710 at 337.931 kb on - strand, within ABIE40_RS01710 at 338.077 kb on + strand, within ABIE40_RS01710 at 338.078 kb on - strand, within ABIE40_RS01710 at 338.139 kb on + strand at 338.139 kb on + strand at 338.139 kb on + strand at 338.140 kb on - strand at 338.140 kb on - strand at 338.140 kb on - strand at 338.223 kb on + strand at 338.223 kb on + strand at 338.224 kb on - strand at 338.224 kb on - strand at 338.224 kb on - strand at 338.224 kb on - strand at 338.224 kb on - strand at 338.224 kb on - strand at 338.224 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 335,224 - ABIE40_RS01700 0.38 +2.5 335,224 - ABIE40_RS01700 0.38 -1.5 335,236 - ABIE40_RS01700 0.39 -0.1 335,236 - ABIE40_RS01700 0.39 -0.1 335,251 - ABIE40_RS01700 0.40 -1.5 335,251 - ABIE40_RS01700 0.40 -0.7 335,385 + ABIE40_RS01700 0.53 -0.5 335,386 - ABIE40_RS01700 0.53 +0.8 335,450 - ABIE40_RS01700 0.59 +0.8 335,450 - ABIE40_RS01700 0.59 -0.8 335,450 - ABIE40_RS01700 0.59 -0.9 335,450 - ABIE40_RS01700 0.59 +1.2 335,450 - ABIE40_RS01700 0.59 -0.5 335,450 - ABIE40_RS01700 0.59 +1.4 335,450 - ABIE40_RS01700 0.59 -0.5 335,450 - ABIE40_RS01700 0.59 -0.5 335,450 - ABIE40_RS01700 0.59 -0.4 335,450 - ABIE40_RS01700 0.59 +1.1 335,452 - ABIE40_RS01700 0.59 -1.1 335,452 - ABIE40_RS01700 0.59 -0.8 335,452 - ABIE40_RS01700 0.59 -1.5 335,452 - ABIE40_RS01700 0.59 -0.2 335,452 - ABIE40_RS01700 0.59 -2.0 335,452 - ABIE40_RS01700 0.59 -1.7 335,452 - ABIE40_RS01700 0.59 -1.1 335,452 - ABIE40_RS01700 0.59 -0.5 335,723 - ABIE40_RS01700 0.85 -0.4 335,723 - ABIE40_RS01700 0.85 -0.2 335,964 + -2.6 335,964 + -0.1 335,965 - -1.0 335,965 - -1.5 336,198 + ABIE40_RS01705 0.21 -1.5 336,240 - ABIE40_RS01705 0.24 -1.2 336,268 - ABIE40_RS01705 0.26 -1.6 336,268 - ABIE40_RS01705 0.26 -1.5 336,328 + ABIE40_RS01705 0.30 -1.8 336,328 + ABIE40_RS01705 0.30 -1.9 336,328 + ABIE40_RS01705 0.30 -2.4 336,328 + ABIE40_RS01705 0.30 -1.4 336,328 + ABIE40_RS01705 0.30 -2.0 336,328 + ABIE40_RS01705 0.30 -1.4 336,328 + ABIE40_RS01705 0.30 -0.7 336,328 + ABIE40_RS01705 0.30 -1.7 336,328 + ABIE40_RS01705 0.30 -3.2 336,329 - ABIE40_RS01705 0.30 +0.3 336,329 - ABIE40_RS01705 0.30 -1.5 336,329 - ABIE40_RS01705 0.30 -2.9 336,329 - ABIE40_RS01705 0.30 -2.1 336,329 - ABIE40_RS01705 0.30 -0.6 336,329 - ABIE40_RS01705 0.30 -0.7 336,329 - ABIE40_RS01705 0.30 +0.2 336,329 - ABIE40_RS01705 0.30 +1.0 336,329 - ABIE40_RS01705 0.30 -1.0 336,329 - ABIE40_RS01705 0.30 -0.1 336,329 - ABIE40_RS01705 0.30 -1.7 336,329 - ABIE40_RS01705 0.30 -2.7 336,330 + ABIE40_RS01705 0.30 -1.4 336,330 + ABIE40_RS01705 0.30 -1.1 336,406 - ABIE40_RS01705 0.36 -1.4 336,446 + ABIE40_RS01705 0.38 -1.4 336,446 + ABIE40_RS01705 0.38 -0.3 336,446 + ABIE40_RS01705 0.38 -0.7 336,447 - ABIE40_RS01705 0.38 -2.2 336,522 - ABIE40_RS01705 0.44 -1.2 336,725 + ABIE40_RS01705 0.58 -1.5 336,725 + ABIE40_RS01705 0.58 -0.2 336,725 + ABIE40_RS01705 0.58 -0.5 336,725 + ABIE40_RS01705 0.58 +0.8 336,854 + ABIE40_RS01705 0.67 -1.4 336,854 + ABIE40_RS01705 0.67 +1.0 336,917 + ABIE40_RS01705 0.72 -2.7 336,917 + ABIE40_RS01705 0.72 -2.3 336,918 - ABIE40_RS01705 0.72 -1.4 336,918 - ABIE40_RS01705 0.72 -2.2 336,918 - ABIE40_RS01705 0.72 -1.6 336,918 - ABIE40_RS01705 0.72 -3.0 337,033 + ABIE40_RS01705 0.80 -0.8 337,073 + ABIE40_RS01705 0.83 -0.0 337,074 - ABIE40_RS01705 0.83 -1.9 337,074 - ABIE40_RS01705 0.83 -3.3 337,074 - ABIE40_RS01705 0.83 -2.5 337,101 + ABIE40_RS01705 0.85 -1.4 337,110 + ABIE40_RS01705 0.85 -3.1 337,110 + ABIE40_RS01705 0.85 -3.1 337,110 + ABIE40_RS01705 0.85 -1.0 337,111 - ABIE40_RS01705 0.85 -0.3 337,158 - ABIE40_RS01705 0.89 -1.0 337,199 + -0.3 337,199 + -0.5 337,200 - -2.7 337,220 + -1.9 337,220 + -1.7 337,220 + -0.4 337,221 - -2.0 337,221 - -2.1 337,221 - -1.9 337,221 - -3.1 337,221 - -1.9 337,221 - -1.0 337,221 - +1.2 337,221 - -1.2 337,221 - -0.6 337,221 - -1.8 337,221 - -3.4 337,325 + -0.2 337,330 - -0.6 337,330 - -0.1 337,579 - ABIE40_RS01710 0.27 -1.7 337,609 + ABIE40_RS01710 0.30 -0.9 337,609 + ABIE40_RS01710 0.30 -1.4 337,609 + ABIE40_RS01710 0.30 -0.3 337,609 + ABIE40_RS01710 0.30 +4.1 337,609 + ABIE40_RS01710 0.30 -2.5 337,609 + ABIE40_RS01710 0.30 +0.6 337,610 - ABIE40_RS01710 0.30 +0.4 337,610 - ABIE40_RS01710 0.30 +0.2 337,610 - ABIE40_RS01710 0.30 -0.4 337,611 + ABIE40_RS01710 0.31 +0.1 337,611 + ABIE40_RS01710 0.31 -0.0 337,611 + ABIE40_RS01710 0.31 +0.9 337,611 + ABIE40_RS01710 0.31 +0.9 337,611 + ABIE40_RS01710 0.31 -1.8 337,611 + ABIE40_RS01710 0.31 -0.4 337,612 - ABIE40_RS01710 0.31 -0.7 337,612 - ABIE40_RS01710 0.31 -2.3 337,612 - ABIE40_RS01710 0.31 -0.2 337,930 + ABIE40_RS01710 0.71 -0.9 337,931 - ABIE40_RS01710 0.71 -1.5 337,931 - ABIE40_RS01710 0.71 -0.2 337,931 - ABIE40_RS01710 0.71 -0.5 338,077 + ABIE40_RS01710 0.89 -0.2 338,078 - ABIE40_RS01710 0.89 +0.9 338,139 + +0.7 338,139 + +0.2 338,139 + -0.2 338,140 - +0.5 338,140 - -1.8 338,140 - -0.3 338,223 + -2.5 338,223 + -1.4 338,224 - -0.2 338,224 - -1.6 338,224 - -1.9 338,224 - -1.9 338,224 - +0.1 338,224 - +1.8 338,224 - -1.2
Or see this region's nucleotide sequence