Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS00080 and ABIE40_RS00085 are separated by 131 nucleotides ABIE40_RS00085 and ABIE40_RS00090 are separated by 207 nucleotides
ABIE40_RS00080: ABIE40_RS00080 - Gfo/Idh/MocA family oxidoreductase, at 17,509 to 18,657
_RS00080
ABIE40_RS00085: ABIE40_RS00085 - TetR family transcriptional regulator, at 18,789 to 19,466
_RS00085
ABIE40_RS00090: ABIE40_RS00090 - extracellular solute-binding protein, at 19,674 to 20,960
_RS00090
Position (kb) 18
19
20 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8 at 17.921 kb on + strand, within ABIE40_RS00080 at 17.946 kb on + strand, within ABIE40_RS00080 at 17.946 kb on + strand, within ABIE40_RS00080 at 17.946 kb on + strand, within ABIE40_RS00080 at 17.947 kb on - strand, within ABIE40_RS00080 at 17.947 kb on - strand, within ABIE40_RS00080 at 17.947 kb on - strand, within ABIE40_RS00080 at 17.947 kb on - strand, within ABIE40_RS00080 at 17.947 kb on - strand, within ABIE40_RS00080 at 17.948 kb on + strand, within ABIE40_RS00080 at 17.948 kb on + strand, within ABIE40_RS00080 at 17.948 kb on + strand, within ABIE40_RS00080 at 17.949 kb on - strand, within ABIE40_RS00080 at 17.949 kb on - strand, within ABIE40_RS00080 at 17.988 kb on + strand, within ABIE40_RS00080 at 18.041 kb on + strand, within ABIE40_RS00080 at 18.041 kb on + strand, within ABIE40_RS00080 at 18.041 kb on + strand, within ABIE40_RS00080 at 18.042 kb on - strand, within ABIE40_RS00080 at 18.060 kb on + strand, within ABIE40_RS00080 at 18.060 kb on + strand, within ABIE40_RS00080 at 18.061 kb on - strand, within ABIE40_RS00080 at 18.061 kb on - strand, within ABIE40_RS00080 at 18.095 kb on + strand, within ABIE40_RS00080 at 18.095 kb on + strand, within ABIE40_RS00080 at 18.096 kb on - strand, within ABIE40_RS00080 at 18.096 kb on - strand, within ABIE40_RS00080 at 18.096 kb on - strand, within ABIE40_RS00080 at 18.096 kb on - strand, within ABIE40_RS00080 at 18.096 kb on - strand, within ABIE40_RS00080 at 18.302 kb on - strand, within ABIE40_RS00080 at 18.302 kb on - strand, within ABIE40_RS00080 at 18.335 kb on + strand, within ABIE40_RS00080 at 18.335 kb on + strand, within ABIE40_RS00080 at 18.335 kb on + strand, within ABIE40_RS00080 at 18.335 kb on + strand, within ABIE40_RS00080 at 18.336 kb on - strand, within ABIE40_RS00080 at 18.336 kb on - strand, within ABIE40_RS00080 at 18.336 kb on - strand, within ABIE40_RS00080 at 18.468 kb on + strand, within ABIE40_RS00080 at 18.468 kb on + strand, within ABIE40_RS00080 at 18.468 kb on + strand, within ABIE40_RS00080 at 18.468 kb on + strand, within ABIE40_RS00080 at 18.468 kb on + strand, within ABIE40_RS00080 at 18.468 kb on + strand, within ABIE40_RS00080 at 18.469 kb on - strand, within ABIE40_RS00080 at 18.469 kb on - strand, within ABIE40_RS00080 at 18.469 kb on - strand, within ABIE40_RS00080 at 18.469 kb on - strand, within ABIE40_RS00080 at 18.608 kb on + strand at 18.608 kb on + strand at 18.608 kb on + strand at 18.608 kb on + strand at 18.608 kb on + strand at 18.766 kb on + strand at 18.767 kb on - strand at 18.767 kb on - strand at 18.824 kb on + strand at 18.825 kb on - strand at 18.825 kb on - strand at 18.825 kb on - strand at 18.892 kb on + strand, within ABIE40_RS00085 at 18.892 kb on + strand, within ABIE40_RS00085 at 18.907 kb on + strand, within ABIE40_RS00085 at 18.913 kb on + strand, within ABIE40_RS00085 at 18.913 kb on + strand, within ABIE40_RS00085 at 18.914 kb on - strand, within ABIE40_RS00085 at 18.937 kb on + strand, within ABIE40_RS00085 at 18.938 kb on - strand, within ABIE40_RS00085 at 19.124 kb on - strand, within ABIE40_RS00085 at 19.152 kb on - strand, within ABIE40_RS00085 at 19.181 kb on + strand, within ABIE40_RS00085 at 19.181 kb on + strand, within ABIE40_RS00085 at 19.182 kb on - strand, within ABIE40_RS00085 at 19.182 kb on - strand, within ABIE40_RS00085 at 19.182 kb on - strand, within ABIE40_RS00085 at 19.182 kb on - strand, within ABIE40_RS00085 at 19.216 kb on + strand, within ABIE40_RS00085 at 19.216 kb on + strand, within ABIE40_RS00085 at 19.216 kb on + strand, within ABIE40_RS00085 at 19.216 kb on + strand, within ABIE40_RS00085 at 19.216 kb on + strand, within ABIE40_RS00085 at 19.216 kb on + strand, within ABIE40_RS00085 at 19.217 kb on - strand, within ABIE40_RS00085 at 19.217 kb on - strand, within ABIE40_RS00085 at 19.217 kb on - strand, within ABIE40_RS00085 at 19.217 kb on - strand, within ABIE40_RS00085 at 19.241 kb on - strand, within ABIE40_RS00085 at 19.241 kb on - strand, within ABIE40_RS00085 at 19.265 kb on - strand, within ABIE40_RS00085 at 19.270 kb on + strand, within ABIE40_RS00085 at 19.270 kb on + strand, within ABIE40_RS00085 at 19.270 kb on + strand, within ABIE40_RS00085 at 19.271 kb on - strand, within ABIE40_RS00085 at 19.365 kb on + strand, within ABIE40_RS00085 at 19.365 kb on + strand, within ABIE40_RS00085 at 19.366 kb on - strand, within ABIE40_RS00085 at 19.366 kb on - strand, within ABIE40_RS00085 at 19.366 kb on - strand, within ABIE40_RS00085 at 19.473 kb on - strand at 19.487 kb on + strand at 19.487 kb on + strand at 19.501 kb on + strand at 19.501 kb on + strand at 19.501 kb on + strand at 19.501 kb on + strand at 19.501 kb on + strand at 19.502 kb on - strand at 19.502 kb on - strand at 19.522 kb on + strand at 19.522 kb on + strand at 19.522 kb on + strand at 19.522 kb on + strand at 19.522 kb on + strand at 19.522 kb on + strand at 19.523 kb on - strand at 19.523 kb on - strand at 19.523 kb on - strand at 19.523 kb on - strand at 19.523 kb on - strand at 19.523 kb on - strand at 19.688 kb on + strand at 19.688 kb on + strand at 19.688 kb on + strand at 19.688 kb on + strand at 19.689 kb on - strand at 19.689 kb on - strand at 19.689 kb on - strand at 19.689 kb on - strand at 19.691 kb on + strand at 19.691 kb on + strand at 19.691 kb on + strand at 19.691 kb on + strand at 19.691 kb on + strand at 19.691 kb on + strand at 19.692 kb on - strand at 19.692 kb on - strand at 19.692 kb on - strand at 19.745 kb on + strand at 19.745 kb on + strand at 19.745 kb on + strand at 19.745 kb on + strand at 19.745 kb on + strand at 19.745 kb on + strand at 19.745 kb on + strand at 19.745 kb on + strand at 19.746 kb on - strand at 19.746 kb on - strand at 19.746 kb on - strand at 19.746 kb on - strand at 19.746 kb on - strand at 19.746 kb on - strand at 19.746 kb on - strand at 19.746 kb on - strand at 19.836 kb on + strand, within ABIE40_RS00090 at 19.837 kb on - strand, within ABIE40_RS00090 at 19.837 kb on - strand, within ABIE40_RS00090 at 19.837 kb on - strand, within ABIE40_RS00090 at 19.894 kb on - strand, within ABIE40_RS00090 at 19.957 kb on - strand, within ABIE40_RS00090 at 19.962 kb on + strand, within ABIE40_RS00090 at 19.962 kb on + strand, within ABIE40_RS00090 at 19.962 kb on + strand, within ABIE40_RS00090 at 19.963 kb on - strand, within ABIE40_RS00090 at 19.963 kb on - strand, within ABIE40_RS00090 at 19.963 kb on - strand, within ABIE40_RS00090 at 19.963 kb on - strand, within ABIE40_RS00090 at 19.963 kb on - strand, within ABIE40_RS00090 at 19.964 kb on + strand, within ABIE40_RS00090 at 19.965 kb on - strand, within ABIE40_RS00090 at 19.975 kb on - strand, within ABIE40_RS00090 at 20.010 kb on + strand, within ABIE40_RS00090 at 20.010 kb on + strand, within ABIE40_RS00090 at 20.010 kb on + strand, within ABIE40_RS00090 at 20.010 kb on + strand, within ABIE40_RS00090 at 20.011 kb on - strand, within ABIE40_RS00090 at 20.011 kb on - strand, within ABIE40_RS00090 at 20.086 kb on - strand, within ABIE40_RS00090 at 20.086 kb on - strand, within ABIE40_RS00090 at 20.130 kb on - strand, within ABIE40_RS00090 at 20.130 kb on - strand, within ABIE40_RS00090 at 20.286 kb on + strand, within ABIE40_RS00090 at 20.287 kb on - strand, within ABIE40_RS00090 at 20.287 kb on - strand, within ABIE40_RS00090 at 20.313 kb on + strand, within ABIE40_RS00090 at 20.427 kb on + strand, within ABIE40_RS00090 at 20.428 kb on - strand, within ABIE40_RS00090 at 20.428 kb on - strand, within ABIE40_RS00090 at 20.428 kb on - strand, within ABIE40_RS00090
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 17,921 + ABIE40_RS00080 0.36 -3.6 17,946 + ABIE40_RS00080 0.38 -0.2 17,946 + ABIE40_RS00080 0.38 +1.4 17,946 + ABIE40_RS00080 0.38 +1.4 17,947 - ABIE40_RS00080 0.38 +0.2 17,947 - ABIE40_RS00080 0.38 -2.4 17,947 - ABIE40_RS00080 0.38 +1.2 17,947 - ABIE40_RS00080 0.38 +0.5 17,947 - ABIE40_RS00080 0.38 +1.0 17,948 + ABIE40_RS00080 0.38 -1.3 17,948 + ABIE40_RS00080 0.38 +0.6 17,948 + ABIE40_RS00080 0.38 -0.5 17,949 - ABIE40_RS00080 0.38 +0.1 17,949 - ABIE40_RS00080 0.38 -1.5 17,988 + ABIE40_RS00080 0.42 -0.5 18,041 + ABIE40_RS00080 0.46 -1.0 18,041 + ABIE40_RS00080 0.46 +1.5 18,041 + ABIE40_RS00080 0.46 -0.2 18,042 - ABIE40_RS00080 0.46 +2.2 18,060 + ABIE40_RS00080 0.48 +0.6 18,060 + ABIE40_RS00080 0.48 +2.2 18,061 - ABIE40_RS00080 0.48 +0.3 18,061 - ABIE40_RS00080 0.48 +0.2 18,095 + ABIE40_RS00080 0.51 +0.2 18,095 + ABIE40_RS00080 0.51 -1.2 18,096 - ABIE40_RS00080 0.51 -1.0 18,096 - ABIE40_RS00080 0.51 -1.5 18,096 - ABIE40_RS00080 0.51 +1.2 18,096 - ABIE40_RS00080 0.51 -0.0 18,096 - ABIE40_RS00080 0.51 +1.0 18,302 - ABIE40_RS00080 0.69 -0.8 18,302 - ABIE40_RS00080 0.69 +0.8 18,335 + ABIE40_RS00080 0.72 +0.6 18,335 + ABIE40_RS00080 0.72 +1.7 18,335 + ABIE40_RS00080 0.72 +2.4 18,335 + ABIE40_RS00080 0.72 +2.1 18,336 - ABIE40_RS00080 0.72 +1.0 18,336 - ABIE40_RS00080 0.72 -0.1 18,336 - ABIE40_RS00080 0.72 -0.9 18,468 + ABIE40_RS00080 0.83 +0.2 18,468 + ABIE40_RS00080 0.83 +0.1 18,468 + ABIE40_RS00080 0.83 +0.7 18,468 + ABIE40_RS00080 0.83 +0.5 18,468 + ABIE40_RS00080 0.83 +0.3 18,468 + ABIE40_RS00080 0.83 +2.4 18,469 - ABIE40_RS00080 0.84 +1.6 18,469 - ABIE40_RS00080 0.84 -0.1 18,469 - ABIE40_RS00080 0.84 -0.0 18,469 - ABIE40_RS00080 0.84 +0.2 18,608 + -0.9 18,608 + -0.1 18,608 + +0.6 18,608 + -1.7 18,608 + -0.6 18,766 + +0.9 18,767 - +1.8 18,767 - +1.4 18,824 + +4.6 18,825 - +8.1 18,825 - +5.5 18,825 - +5.0 18,892 + ABIE40_RS00085 0.15 +4.5 18,892 + ABIE40_RS00085 0.15 +2.2 18,907 + ABIE40_RS00085 0.17 +5.1 18,913 + ABIE40_RS00085 0.18 +5.1 18,913 + ABIE40_RS00085 0.18 +5.7 18,914 - ABIE40_RS00085 0.18 +5.8 18,937 + ABIE40_RS00085 0.22 +6.4 18,938 - ABIE40_RS00085 0.22 +5.0 19,124 - ABIE40_RS00085 0.49 +5.9 19,152 - ABIE40_RS00085 0.54 +5.3 19,181 + ABIE40_RS00085 0.58 +4.9 19,181 + ABIE40_RS00085 0.58 +4.8 19,182 - ABIE40_RS00085 0.58 +5.4 19,182 - ABIE40_RS00085 0.58 +5.9 19,182 - ABIE40_RS00085 0.58 +4.6 19,182 - ABIE40_RS00085 0.58 +5.9 19,216 + ABIE40_RS00085 0.63 +5.6 19,216 + ABIE40_RS00085 0.63 +6.2 19,216 + ABIE40_RS00085 0.63 +3.2 19,216 + ABIE40_RS00085 0.63 +4.8 19,216 + ABIE40_RS00085 0.63 +2.3 19,216 + ABIE40_RS00085 0.63 +4.6 19,217 - ABIE40_RS00085 0.63 +5.3 19,217 - ABIE40_RS00085 0.63 +5.1 19,217 - ABIE40_RS00085 0.63 +5.6 19,217 - ABIE40_RS00085 0.63 +6.1 19,241 - ABIE40_RS00085 0.67 +5.5 19,241 - ABIE40_RS00085 0.67 +5.9 19,265 - ABIE40_RS00085 0.70 +5.1 19,270 + ABIE40_RS00085 0.71 +7.0 19,270 + ABIE40_RS00085 0.71 +5.9 19,270 + ABIE40_RS00085 0.71 +5.1 19,271 - ABIE40_RS00085 0.71 +6.2 19,365 + ABIE40_RS00085 0.85 +5.3 19,365 + ABIE40_RS00085 0.85 +5.1 19,366 - ABIE40_RS00085 0.85 +5.3 19,366 - ABIE40_RS00085 0.85 +5.0 19,366 - ABIE40_RS00085 0.85 +5.4 19,473 - +1.5 19,487 + +5.0 19,487 + +4.7 19,501 + +1.9 19,501 + +2.1 19,501 + +3.0 19,501 + +2.6 19,501 + +2.0 19,502 - +0.2 19,502 - +0.0 19,522 + +1.8 19,522 + +2.5 19,522 + +3.3 19,522 + +1.7 19,522 + +2.2 19,522 + +1.4 19,523 - -1.6 19,523 - -1.0 19,523 - -0.5 19,523 - -2.1 19,523 - +1.1 19,523 - -1.5 19,688 + -1.6 19,688 + -0.2 19,688 + +0.7 19,688 + +1.0 19,689 - -1.4 19,689 - -0.7 19,689 - -0.6 19,689 - -0.5 19,691 + +0.6 19,691 + +0.2 19,691 + +0.7 19,691 + +0.6 19,691 + +0.1 19,691 + +1.3 19,692 - +0.1 19,692 - +0.6 19,692 - +1.2 19,745 + +2.6 19,745 + +2.0 19,745 + +0.8 19,745 + -0.2 19,745 + +2.3 19,745 + +0.1 19,745 + -0.5 19,745 + +1.3 19,746 - -0.8 19,746 - -2.5 19,746 - +0.2 19,746 - -0.2 19,746 - -0.8 19,746 - +0.4 19,746 - +0.3 19,746 - -1.3 19,836 + ABIE40_RS00090 0.13 +1.8 19,837 - ABIE40_RS00090 0.13 +0.0 19,837 - ABIE40_RS00090 0.13 -2.4 19,837 - ABIE40_RS00090 0.13 -0.6 19,894 - ABIE40_RS00090 0.17 -0.2 19,957 - ABIE40_RS00090 0.22 +1.2 19,962 + ABIE40_RS00090 0.22 -0.5 19,962 + ABIE40_RS00090 0.22 -0.2 19,962 + ABIE40_RS00090 0.22 -0.1 19,963 - ABIE40_RS00090 0.22 +1.2 19,963 - ABIE40_RS00090 0.22 -0.5 19,963 - ABIE40_RS00090 0.22 +1.1 19,963 - ABIE40_RS00090 0.22 +0.0 19,963 - ABIE40_RS00090 0.22 +1.5 19,964 + ABIE40_RS00090 0.23 +0.4 19,965 - ABIE40_RS00090 0.23 -1.6 19,975 - ABIE40_RS00090 0.23 -1.0 20,010 + ABIE40_RS00090 0.26 -0.5 20,010 + ABIE40_RS00090 0.26 -0.8 20,010 + ABIE40_RS00090 0.26 +1.0 20,010 + ABIE40_RS00090 0.26 -0.9 20,011 - ABIE40_RS00090 0.26 -1.6 20,011 - ABIE40_RS00090 0.26 +0.5 20,086 - ABIE40_RS00090 0.32 -0.6 20,086 - ABIE40_RS00090 0.32 -0.1 20,130 - ABIE40_RS00090 0.35 -0.5 20,130 - ABIE40_RS00090 0.35 +0.4 20,286 + ABIE40_RS00090 0.48 +1.1 20,287 - ABIE40_RS00090 0.48 +0.7 20,287 - ABIE40_RS00090 0.48 +0.8 20,313 + ABIE40_RS00090 0.50 +0.2 20,427 + ABIE40_RS00090 0.59 +1.0 20,428 - ABIE40_RS00090 0.59 -1.0 20,428 - ABIE40_RS00090 0.59 +1.3 20,428 - ABIE40_RS00090 0.59 -0.2
Or see this region's nucleotide sequence