Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21845 and ABID97_RS21850 are separated by 37 nucleotides ABID97_RS21850 and ABID97_RS21855 overlap by 4 nucleotides ABID97_RS21855 and ABID97_RS21860 overlap by 4 nucleotides
ABID97_RS21845: ABID97_RS21845 - acetate/propionate family kinase, at 4,520,130 to 4,521,383
_RS21845
ABID97_RS21850: ABID97_RS21850 - cyclopropane-fatty-acyl-phospholipid synthase family protein, at 4,521,421 to 4,522,692
_RS21850
ABID97_RS21855: ABID97_RS21855 - DUF1365 family protein, at 4,522,689 to 4,523,483
_RS21855
ABID97_RS21860: ABID97_RS21860 - FAD-dependent oxidoreductase, at 4,523,480 to 4,524,856
_RS21860
Position (kb)
4521
4522
4523 Strain fitness (log2 ratio)
-1
0
1 at 4520.615 kb on - strand, within ABID97_RS21845 at 4520.615 kb on - strand, within ABID97_RS21845 at 4520.815 kb on + strand, within ABID97_RS21845 at 4520.836 kb on + strand, within ABID97_RS21845 at 4521.388 kb on + strand at 4521.389 kb on - strand at 4521.393 kb on + strand at 4521.393 kb on + strand at 4521.394 kb on - strand at 4521.497 kb on + strand at 4521.506 kb on + strand at 4521.507 kb on - strand at 4521.507 kb on - strand at 4521.510 kb on - strand at 4521.510 kb on - strand at 4521.643 kb on - strand, within ABID97_RS21850 at 4521.827 kb on + strand, within ABID97_RS21850 at 4521.827 kb on + strand, within ABID97_RS21850 at 4522.178 kb on + strand, within ABID97_RS21850 at 4522.229 kb on + strand, within ABID97_RS21850 at 4523.080 kb on + strand, within ABID97_RS21855 at 4523.081 kb on - strand, within ABID97_RS21855 at 4523.116 kb on + strand, within ABID97_RS21855 at 4523.296 kb on + strand, within ABID97_RS21855 at 4523.297 kb on - strand, within ABID97_RS21855 at 4523.408 kb on - strand at 4523.408 kb on - strand at 4523.461 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 4,520,615 - ABID97_RS21845 0.39 +0.2 4,520,615 - ABID97_RS21845 0.39 +0.8 4,520,815 + ABID97_RS21845 0.55 +0.3 4,520,836 + ABID97_RS21845 0.56 -0.2 4,521,388 + +0.9 4,521,389 - -0.2 4,521,393 + +0.1 4,521,393 + +0.2 4,521,394 - -0.6 4,521,497 + +0.7 4,521,506 + +0.4 4,521,507 - -0.5 4,521,507 - -0.5 4,521,510 - -0.5 4,521,510 - +0.1 4,521,643 - ABID97_RS21850 0.17 +1.6 4,521,827 + ABID97_RS21850 0.32 -0.0 4,521,827 + ABID97_RS21850 0.32 +0.5 4,522,178 + ABID97_RS21850 0.60 +0.1 4,522,229 + ABID97_RS21850 0.64 -0.1 4,523,080 + ABID97_RS21855 0.49 +0.1 4,523,081 - ABID97_RS21855 0.49 +0.3 4,523,116 + ABID97_RS21855 0.54 -0.8 4,523,296 + ABID97_RS21855 0.76 -0.9 4,523,297 - ABID97_RS21855 0.76 -0.0 4,523,408 - +0.2 4,523,408 - -1.4 4,523,461 + +1.2
Or see this region's nucleotide sequence